Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024007.1-P | Field mustard | nucleus | 95.67 | 94.65 |
| CDY13433 | Canola | nucleus | 95.24 | 94.42 |
| CDY13429 | Canola | cytosol | 51.73 | 92.64 |
| AT4G31450.2 | Thale cress | nucleus | 80.74 | 75.05 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 8.66 | 43.48 |
| Zm00001d015453_P001 | Maize | cytosol | 11.69 | 41.86 |
| Zm00001d019616_P001 | Maize | cytosol | 11.47 | 41.09 |
| Zm00001d013776_P001 | Maize | cytosol | 11.47 | 41.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 15.58 | 32.0 |
| CDX97032 | Canola | plastid | 19.48 | 26.87 |
| CDY71882 | Canola | plastid | 19.7 | 26.0 |
| CDX85750 | Canola | nucleus | 20.56 | 24.61 |
| CDY40109 | Canola | nucleus | 9.52 | 23.66 |
| OQU80147 | Sorghum | nucleus | 17.1 | 22.07 |
| CDX95473 | Canola | nucleus | 22.08 | 21.98 |
| CDX78393 | Canola | nucleus | 23.16 | 21.66 |
| CDX70363 | Canola | nucleus | 22.29 | 21.19 |
| CDX97044 | Canola | nucleus | 23.38 | 21.18 |
| Zm00001d024406_P002 | Maize | nucleus | 16.23 | 20.95 |
| CDY68658 | Canola | nucleus | 21.21 | 20.9 |
| CDX69813 | Canola | mitochondrion | 23.81 | 20.64 |
| EES12797 | Sorghum | nucleus | 16.67 | 20.59 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 16.45 | 20.38 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 16.23 | 20.33 |
| CDX77848 | Canola | nucleus | 9.31 | 20.28 |
| CDY67192 | Canola | nucleus | 9.31 | 20.19 |
| CDX88140 | Canola | nucleus | 21.0 | 20.12 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 16.23 | 20.0 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 16.02 | 19.89 |
| CDX79718 | Canola | nucleus | 22.73 | 19.77 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 23.16 | 19.45 |
| Os08t0241400-00 | Rice | nucleus | 15.8 | 19.36 |
| CDY46757 | Canola | nucleus | 22.29 | 19.32 |
| Zm00001d026248_P001 | Maize | nucleus | 15.58 | 18.95 |
| Solyc08g006460.2.1 | Tomato | nucleus | 21.64 | 18.83 |
| CDY55435 | Canola | nucleus | 21.43 | 18.75 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 20.78 | 18.68 |
| PGSC0003DMT400067670 | Potato | nucleus | 21.21 | 18.56 |
| CDY68424 | Canola | nucleus | 21.43 | 18.44 |
| KRH04957 | Soybean | nucleus | 21.21 | 18.42 |
| CDY25871 | Canola | nucleus | 19.05 | 18.41 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 15.8 | 18.39 |
| KRH16134 | Soybean | nucleus | 22.08 | 18.38 |
| PGSC0003DMT400075959 | Potato | nucleus | 21.64 | 18.35 |
| CDY60141 | Canola | plastid | 14.07 | 18.21 |
| CDY55839 | Canola | nucleus | 19.26 | 18.2 |
| CDX73013 | Canola | plastid | 13.85 | 18.03 |
| CDY26006 | Canola | nucleus | 17.97 | 17.97 |
| EES04530 | Sorghum | nucleus | 20.13 | 17.95 |
| CDY24110 | Canola | nucleus | 17.75 | 17.83 |
| Solyc12g096420.1.1 | Tomato | nucleus | 21.0 | 17.6 |
| KRH52597 | Soybean | nucleus | 20.56 | 17.56 |
| CDY27083 | Canola | nucleus | 8.23 | 17.35 |
| CDX91624 | Canola | nucleus | 8.23 | 17.27 |
| CDY11092 | Canola | cytosol, plastid | 12.99 | 17.24 |
| CDX93901 | Canola | nucleus | 8.87 | 17.08 |
| Os04t0603200-01 | Rice | nucleus | 12.12 | 17.02 |
| CDY53710 | Canola | nucleus | 8.87 | 16.94 |
| CDX68213 | Canola | nucleus, plastid | 12.77 | 16.91 |
| CDY32973 | Canola | nucleus | 14.94 | 16.83 |
| Os06t0695600-01 | Rice | nucleus | 21.0 | 16.75 |
| CDX82450 | Canola | nucleus | 16.23 | 16.74 |
| CDX75805 | Canola | cytosol | 16.02 | 16.7 |
| CDY68521 | Canola | nucleus | 15.58 | 16.33 |
| CDX91625 | Canola | cytosol | 8.01 | 16.16 |
| CDY43590 | Canola | nucleus | 14.72 | 16.15 |
| CDY00512 | Canola | nucleus | 9.52 | 16.12 |
| CDY31919 | Canola | nucleus | 9.52 | 16.12 |
| CDX97629 | Canola | nucleus | 15.37 | 16.1 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 20.13 | 16.09 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 20.35 | 16.04 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 19.7 | 15.88 |
| Zm00001d015289_P001 | Maize | nucleus | 19.26 | 15.72 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 19.05 | 15.6 |
| Zm00001d014609_P002 | Maize | nucleus | 19.7 | 15.56 |
| KXG20741 | Sorghum | nucleus | 19.7 | 15.42 |
| CDY27082 | Canola | cytosol | 7.79 | 15.13 |
| CDX83878 | Canola | nucleus | 11.69 | 15.13 |
| KRH61936 | Soybean | nucleus | 18.18 | 15.08 |
| CDY25357 | Canola | nucleus | 10.39 | 15.0 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 18.83 | 14.92 |
| CDX96741 | Canola | nucleus | 11.69 | 14.84 |
| CDY33429 | Canola | nucleus | 10.39 | 14.55 |
| Os02t0150700-01 | Rice | extracellular | 20.13 | 14.51 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 18.83 | 14.43 |
| CDY17114 | Canola | nucleus | 16.45 | 14.31 |
| CDY24595 | Canola | nucleus | 9.74 | 14.29 |
| CDY22376 | Canola | nucleus | 18.83 | 14.15 |
| CDY42218 | Canola | nucleus | 10.17 | 14.07 |
| CDY43220 | Canola | nucleus | 17.32 | 13.14 |
| CDY17061 | Canola | nucleus | 17.1 | 13.04 |
| CDX71531 | Canola | nucleus | 17.75 | 12.87 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 19.26 | 12.81 |
| CDY62314 | Canola | nucleus | 16.02 | 12.5 |
| CDY37230 | Canola | nucleus | 15.8 | 12.39 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 15.37 | 12.22 |
| CDY47948 | Canola | nucleus | 4.98 | 4.57 |
| CDY69560 | Canola | nucleus | 3.68 | 3.34 |
| CDY36635 | Canola | nucleus | 3.25 | 2.52 |
Protein Annotations
| EnsemblPlants:CDY63645 | EnsemblPlantsGene:GSBRNA2T00039507001 | Gene3D:3.30.40.10 | GO:A0A078JF75 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY63645 | ProteinID:CDY63645.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EBF810 |
| UniProt:A0A078JF75 | MapMan:35.1 | : | : | : | : |
Description
BnaC07g50990DBnaC07g50990D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JF75]
Coordinates
chrLK034331:-:22915..24593
Molecular Weight (calculated)
51302.0 Da
IEP (calculated)
8.462
GRAVY (calculated)
-0.746
Length
462 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRWSGKRAI EGRPDTKKGS GVVLRDRFNN SICSDEKKSM KFTRFVGSSY KKEKAVWSST SSRSSPNGKE VIGTSSKIPV SISSSSSVKN EKQPQIVTDS
101: SESSKGSEDE VETEISEEPR VHKKVMESSD LPSSSRAKKG FRQRFGLSKQ DFRPGPSSQS TNRGCSPLLS GFGLEKRLGG KVDTISKRRV YGESSSSSSA
201: RGKKIVSELP SEERRLVFNP RGGSVSDTRR ARHCILNDAS VGSQRSVNRG DSRIRFSNRG SGGRNGLSSI TTREMSQSET SNNLSSPVSL ELFSGFPDFG
301: SLSSQDSFRN YNLDGISEIL PELDRIEQDI ELNYEELLIM ETGLLLGGLS FYDQHRDMRL DIDNMSYEEL LALEERIGTV STALTEEAIS KSLKTSIYLM
401: KPSSDHKEDA KCSICQEEYT IGDEVGRLHC EHAYHLKCVQ EWLRMKSWCP ICKTTADTSS SK
101: SESSKGSEDE VETEISEEPR VHKKVMESSD LPSSSRAKKG FRQRFGLSKQ DFRPGPSSQS TNRGCSPLLS GFGLEKRLGG KVDTISKRRV YGESSSSSSA
201: RGKKIVSELP SEERRLVFNP RGGSVSDTRR ARHCILNDAS VGSQRSVNRG DSRIRFSNRG SGGRNGLSSI TTREMSQSET SNNLSSPVSL ELFSGFPDFG
301: SLSSQDSFRN YNLDGISEIL PELDRIEQDI ELNYEELLIM ETGLLLGGLS FYDQHRDMRL DIDNMSYEEL LALEERIGTV STALTEEAIS KSLKTSIYLM
401: KPSSDHKEDA KCSICQEEYT IGDEVGRLHC EHAYHLKCVQ EWLRMKSWCP ICKTTADTSS SK
001: MDRWSSKRAM EARPDSKKKG GVVFRDRFNS NSCKVPICSD EKKSMNFTRF VGSSDKKEKS VLSTYRSSPN GKEVIGTSSK ICISSSSSVK SGEKQPFSQI
101: AIDSSESSRG SEDEVESEIL QVPLGRDKRR MNNKLIYGKV ITPEAECSKL PSSSRIKRGF RQRFGLSKQE FHPGPSGQST SANRGCSPLL SGVIPSGFGL
201: DKRLSRKADT ISKTKVYGES SSSSSARGKN VTEPPPVEVR RRSFNPRGSV SDSRRARHCI LDDDNDVASV GSQRLANRNN SRIRGSGRDG LSSVTAAEMS
301: QTETSNNLNS PVSLELFSGF PEFGLSGSLL SHDSFRSYNL DGISEILPEL DRIEQDIELN YEDLLIMETG LLLGGLSFHD QHRDMRLDID NMSYEELLAL
401: EERIGTVSTA LTEEAISKCL KTSIYQMKPL SYGSITKSPS DNKEDAKCSI CQEEYTIGDE VGRLHCEHTY HVKCVQEWLR IKSWCPICKA TAETSSK
101: AIDSSESSRG SEDEVESEIL QVPLGRDKRR MNNKLIYGKV ITPEAECSKL PSSSRIKRGF RQRFGLSKQE FHPGPSGQST SANRGCSPLL SGVIPSGFGL
201: DKRLSRKADT ISKTKVYGES SSSSSARGKN VTEPPPVEVR RRSFNPRGSV SDSRRARHCI LDDDNDVASV GSQRLANRNN SRIRGSGRDG LSSVTAAEMS
301: QTETSNNLNS PVSLELFSGF PEFGLSGSLL SHDSFRSYNL DGISEILPEL DRIEQDIELN YEDLLIMETG LLLGGLSFHD QHRDMRLDID NMSYEELLAL
401: EERIGTVSTA LTEEAISKCL KTSIYQMKPL SYGSITKSPS DNKEDAKCSI CQEEYTIGDE VGRLHCEHTY HVKCVQEWLR IKSWCPICKA TAETSSK
Arabidopsis Description
At4g31450/F3L17_20 [Source:UniProtKB/TrEMBL;Acc:Q944Q9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.