Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038240.1-P | Field mustard | nucleus | 96.36 | 95.5 |
| CDY42218 | Canola | nucleus | 96.36 | 95.21 |
| CDY25357 | Canola | nucleus | 84.85 | 87.5 |
| CDY24595 | Canola | nucleus | 83.33 | 87.3 |
| AT3G19910.1 | Thale cress | nucleus | 82.12 | 79.71 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 48.48 | 51.95 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 18.18 | 50.85 |
| GSMUA_Achr4P05140_001 | Banana | nucleus | 45.15 | 50.34 |
| OQU80744 | Sorghum | mitochondrion | 21.21 | 48.61 |
| KRG90628 | Soybean | nucleus | 48.79 | 48.06 |
| GSMUA_Achr3P26700_001 | Banana | nucleus | 42.42 | 47.95 |
| TraesCS7A01G271500.1 | Wheat | cytosol, mitochondrion, nucleus | 41.21 | 47.22 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 17.27 | 46.72 |
| EES15239 | Sorghum | nucleus | 43.03 | 45.22 |
| Os08t0548300-01 | Rice | nucleus | 40.91 | 44.26 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 38.18 | 43.9 |
| EER97094 | Sorghum | nucleus | 43.03 | 43.83 |
| Os09t0535100-01 | Rice | nucleus | 43.03 | 43.69 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 44.85 | 43.53 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 39.09 | 43.14 |
| TraesCS7D01G271800.4 | Wheat | cytosol, mitochondrion, nucleus | 38.79 | 42.67 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 45.76 | 42.54 |
| TraesCS7B01G170500.1 | Wheat | cytosol, mitochondrion, nucleus | 38.48 | 42.47 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 43.64 | 41.62 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 39.7 | 40.68 |
| Zm00001d006226_P001 | Maize | peroxisome | 39.09 | 40.57 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 45.15 | 39.42 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 36.67 | 39.41 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 35.76 | 39.2 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 43.03 | 38.38 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 24.55 | 36.49 |
| CDX93901 | Canola | nucleus | 20.91 | 28.75 |
| CDY53710 | Canola | nucleus | 20.91 | 28.51 |
| CDX77848 | Canola | nucleus | 16.36 | 25.47 |
| CDY67192 | Canola | nucleus | 15.76 | 24.41 |
| CDY27083 | Canola | nucleus | 15.45 | 23.29 |
| CDX91624 | Canola | nucleus | 15.45 | 23.18 |
| CDY31919 | Canola | nucleus | 18.79 | 22.71 |
| CDY00512 | Canola | nucleus | 18.79 | 22.71 |
| CDX91625 | Canola | cytosol | 13.94 | 20.09 |
| CDY27082 | Canola | cytosol | 12.73 | 17.65 |
| CDY13429 | Canola | cytosol | 12.73 | 16.28 |
| CDX97032 | Canola | plastid | 14.24 | 14.03 |
| CDY71882 | Canola | plastid | 14.24 | 13.43 |
| CDX85750 | Canola | nucleus | 15.15 | 12.95 |
| CDY40109 | Canola | nucleus | 6.97 | 12.37 |
| CDY60141 | Canola | plastid | 12.73 | 11.76 |
| CDY32973 | Canola | nucleus | 14.55 | 11.71 |
| CDX73013 | Canola | plastid | 12.42 | 11.55 |
| CDY43590 | Canola | nucleus | 14.55 | 11.4 |
| CDX68213 | Canola | nucleus, plastid | 11.82 | 11.17 |
| CDY17114 | Canola | nucleus | 17.88 | 11.11 |
| CDX95473 | Canola | nucleus | 15.15 | 10.78 |
| CDY11092 | Canola | cytosol, plastid | 11.21 | 10.63 |
| CDX75805 | Canola | cytosol | 14.24 | 10.61 |
| CDY46757 | Canola | nucleus | 16.97 | 10.51 |
| CDX82450 | Canola | nucleus | 14.24 | 10.49 |
| CDX96741 | Canola | nucleus | 11.52 | 10.44 |
| CDY68521 | Canola | nucleus | 13.94 | 10.43 |
| CDY63645 | Canola | nucleus | 14.55 | 10.39 |
| CDX88140 | Canola | nucleus | 15.15 | 10.37 |
| CDX83878 | Canola | nucleus | 11.21 | 10.36 |
| CDY13433 | Canola | nucleus | 14.55 | 10.3 |
| CDY68658 | Canola | nucleus | 14.55 | 10.23 |
| CDX97629 | Canola | nucleus | 13.64 | 10.2 |
| CDX97044 | Canola | nucleus | 15.76 | 10.2 |
| CDX79718 | Canola | nucleus | 16.36 | 10.17 |
| CDX78393 | Canola | nucleus | 15.15 | 10.12 |
| CDY25871 | Canola | nucleus | 14.24 | 9.83 |
| CDY55839 | Canola | nucleus | 14.55 | 9.82 |
| CDY24110 | Canola | nucleus | 13.64 | 9.78 |
| CDY26006 | Canola | nucleus | 13.64 | 9.74 |
| CDX70363 | Canola | nucleus | 14.24 | 9.67 |
| CDY55435 | Canola | nucleus | 15.15 | 9.47 |
| CDX69813 | Canola | mitochondrion | 15.15 | 9.38 |
| CDY68424 | Canola | nucleus | 15.15 | 9.31 |
| CDY22376 | Canola | nucleus | 16.97 | 9.11 |
| CDX71531 | Canola | nucleus | 16.97 | 8.79 |
| CDY62314 | Canola | nucleus | 15.15 | 8.45 |
| CDY37230 | Canola | nucleus | 14.85 | 8.32 |
| CDY43220 | Canola | nucleus | 14.85 | 8.05 |
| CDY17061 | Canola | nucleus | 14.55 | 7.92 |
| CDY47948 | Canola | nucleus | 8.79 | 5.77 |
| CDY69560 | Canola | nucleus | 5.45 | 3.54 |
| CDY36635 | Canola | nucleus | 4.85 | 2.68 |
Protein Annotations
| EnsemblPlants:CDY33429 | EnsemblPlantsGene:GSBRNA2T00054351001 | Gene3D:3.30.40.10 | GO:A0A078H7G3 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF166 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY33429 | ProteinID:CDY33429.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE0320 |
| UniProt:A0A078H7G3 | MapMan:35.1 | : | : | : | : |
Description
BnaC01g32960DBnaC01g32960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H7G3]
Coordinates
chrLK032314:+:197447..200322
Molecular Weight (calculated)
36054.9 Da
IEP (calculated)
3.663
GRAVY (calculated)
-0.853
Length
330 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEKDNNDH ATNVAVTAEQ ATKINDADVR SPENRQTGVV SESGSGSSEK GEEGAETAVG DESGSNSVGE LLPLRSSSAR VPFTNLSQIE SDLALARTLQ
101: EQERAYMMLT MNSEISDYGS WETGSYVYEE DEFDDPEDED DEYETDDDPQ EDAPDVNANG DDQEDGGRNA DTEEAEAGYS DDEAFARAIQ EAEAREMADR
201: LSALTGLANR VEVLEDDDHT SEDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKDGEN QNGTNESCVI CRLDYEDDDD LILLPCKHSY
301: HSECINNWLK INKICPVCSA EVSTSSAGQS
101: EQERAYMMLT MNSEISDYGS WETGSYVYEE DEFDDPEDED DEYETDDDPQ EDAPDVNANG DDQEDGGRNA DTEEAEAGYS DDEAFARAIQ EAEAREMADR
201: LSALTGLANR VEVLEDDDHT SEDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKDGEN QNGTNESCVI CRLDYEDDDD LILLPCKHSY
301: HSECINNWLK INKICPVCSA EVSTSSAGQS
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.