Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040450.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX93901 | Canola | nucleus | 96.28 | 97.08 |
| AT3G63530.2 | Thale cress | cytosol | 88.43 | 86.29 |
| KRH20832 | Soybean | nucleus | 55.79 | 54.66 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 55.37 | 54.25 |
| VIT_13s0064g01030.t01 | Wine grape | nucleus | 53.31 | 52.23 |
| PGSC0003DMT400017553 | Potato | nucleus | 43.39 | 43.21 |
| Solyc01g087060.2.1 | Tomato | nucleus | 42.98 | 28.11 |
| CDX77848 | Canola | nucleus | 24.38 | 27.83 |
| CDY67192 | Canola | nucleus | 24.38 | 27.7 |
| CDY27083 | Canola | nucleus | 23.14 | 25.57 |
| CDX91624 | Canola | nucleus | 22.73 | 25.0 |
| CDY00512 | Canola | nucleus | 25.62 | 22.71 |
| CDY31919 | Canola | nucleus | 25.21 | 22.34 |
| CDY24595 | Canola | nucleus | 28.51 | 21.9 |
| CDY25357 | Canola | nucleus | 28.1 | 21.25 |
| CDY42218 | Canola | nucleus | 28.93 | 20.96 |
| CDY33429 | Canola | nucleus | 28.51 | 20.91 |
| CDX91625 | Canola | cytosol | 19.01 | 20.09 |
| CDY27082 | Canola | cytosol | 17.77 | 18.07 |
| CDY13429 | Canola | cytosol | 15.7 | 14.73 |
| CDX97032 | Canola | plastid | 18.59 | 13.43 |
| CDY71882 | Canola | plastid | 18.59 | 12.86 |
| CDX85750 | Canola | nucleus | 19.01 | 11.92 |
| CDY68521 | Canola | nucleus | 21.49 | 11.79 |
| CDY60141 | Canola | plastid | 17.36 | 11.76 |
| CDX97629 | Canola | nucleus | 21.07 | 11.56 |
| CDY24110 | Canola | nucleus | 21.9 | 11.52 |
| CDY26006 | Canola | nucleus | 21.9 | 11.47 |
| CDY32973 | Canola | nucleus | 19.42 | 11.46 |
| CDX83878 | Canola | nucleus | 16.53 | 11.2 |
| CDY43590 | Canola | nucleus | 19.42 | 11.16 |
| CDX96741 | Canola | nucleus | 16.53 | 10.99 |
| CDX73013 | Canola | plastid | 16.12 | 10.99 |
| CDX68213 | Canola | nucleus, plastid | 15.7 | 10.89 |
| CDY40109 | Canola | nucleus | 8.26 | 10.75 |
| CDX82450 | Canola | nucleus | 19.83 | 10.71 |
| CDY68658 | Canola | nucleus | 20.66 | 10.66 |
| CDY11092 | Canola | cytosol, plastid | 15.29 | 10.63 |
| CDX75805 | Canola | cytosol | 19.42 | 10.61 |
| CDY25871 | Canola | nucleus | 20.66 | 10.46 |
| CDX88140 | Canola | nucleus | 20.66 | 10.37 |
| CDY55839 | Canola | nucleus | 20.66 | 10.22 |
| CDX95473 | Canola | nucleus | 19.42 | 10.13 |
| CDX78393 | Canola | nucleus | 20.66 | 10.12 |
| CDX79718 | Canola | nucleus | 21.9 | 9.98 |
| CDY46757 | Canola | nucleus | 21.9 | 9.94 |
| CDY55435 | Canola | nucleus | 21.49 | 9.85 |
| CDX97044 | Canola | nucleus | 20.66 | 9.8 |
| CDY17114 | Canola | nucleus | 21.49 | 9.79 |
| CDY68424 | Canola | nucleus | 21.49 | 9.68 |
| CDX70363 | Canola | nucleus | 19.42 | 9.67 |
| CDX69813 | Canola | mitochondrion | 20.25 | 9.19 |
| CDY63645 | Canola | nucleus | 16.94 | 8.87 |
| CDY13433 | Canola | nucleus | 16.94 | 8.8 |
| CDY22376 | Canola | nucleus | 21.9 | 8.62 |
| CDY17061 | Canola | nucleus | 21.07 | 8.42 |
| CDY43220 | Canola | nucleus | 21.07 | 8.37 |
| CDX71531 | Canola | nucleus | 21.49 | 8.16 |
| CDY37230 | Canola | nucleus | 18.18 | 7.47 |
| CDY62314 | Canola | nucleus | 18.18 | 7.43 |
| CDY47948 | Canola | nucleus | 4.55 | 2.19 |
| CDY69560 | Canola | nucleus | 3.31 | 1.57 |
| CDY36635 | Canola | nucleus | 3.72 | 1.51 |
Protein Annotations
| KEGG:00220+6.3.2.- | KEGG:00261+6.3.2.- | KEGG:00380+6.3.2.- | Gene3D:3.30.40.10 | MapMan:35.1 | GO:A0A078IRM5 |
| UniProt:A0A078IRM5 | InterPro:BB | EnsemblPlants:CDY53710 | ProteinID:CDY53710 | ProteinID:CDY53710.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0040007 | GO:GO:0046621 | EnsemblPlantsGene:GSBRNA2T00011269001 |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF75 |
| SMART:SM00184 | SUPFAM:SSF57850 | UniPathway:UPA00143 | UniParc:UPI0002545268 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
Description
BnaAnng12510DBnaAnng12510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IRM5]
Coordinates
chrLK033230:+:11991..13233
Molecular Weight (calculated)
27355.6 Da
IEP (calculated)
4.562
GRAVY (calculated)
-0.639
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGDRPDSHY PETGFPYAAS ASYMDFYGGA AQDPLNYAHA GTMHPHQDSL YWTMNTNAYK FGFSGSDNAS FYGSYDLNDH LSRMSIGRTN WEYLPMVNVD
101: ESVPRSVQVG DTDDHSDAEE CIAIEHDPES PQVSWQDDID PDTMTYEELI ELGEAVGSES RGLSQELIET LPTRKYKFGS FFSRKRAGDR CVICQLKYKI
201: GEKQMNLPCK HVYHSECISK WLSINKICPV CNSEVFGEPS IH
101: ESVPRSVQVG DTDDHSDAEE CIAIEHDPES PQVSWQDDID PDTMTYEELI ELGEAVGSES RGLSQELIET LPTRKYKFGS FFSRKRAGDR CVICQLKYKI
201: GEKQMNLPCK HVYHSECISK WLSINKICPV CNSEVFGEPS IH
001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
Arabidopsis Description
BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.