Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003830.1-P | Field mustard | nucleus, plastid | 89.08 | 91.45 |
| CDX68213 | Canola | nucleus, plastid | 90.52 | 90.26 |
| CDX73013 | Canola | plastid | 72.99 | 71.55 |
| CDY60141 | Canola | plastid | 72.7 | 70.87 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 67.24 | 63.76 |
| CDX96741 | Canola | nucleus | 54.89 | 52.47 |
| CDX83878 | Canola | nucleus | 53.74 | 52.38 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 45.11 | 42.32 |
| KRH41763 | Soybean | nucleus | 42.24 | 38.99 |
| Solyc03g118840.2.1 | Tomato | nucleus | 42.24 | 37.98 |
| KRH48568 | Soybean | nucleus | 38.51 | 37.85 |
| PGSC0003DMT400014732 | Potato | nucleus | 41.95 | 37.63 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 21.26 | 37.0 |
| KRH39137 | Soybean | nucleus | 38.79 | 36.59 |
| PGSC0003DMT400078539 | Potato | plastid | 24.71 | 34.54 |
| KRH60461 | Soybean | nucleus | 42.24 | 34.11 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 29.31 | 33.44 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 32.47 | 32.94 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 31.61 | 32.93 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 32.47 | 32.75 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 32.76 | 32.48 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 31.61 | 32.35 |
| OQU87370 | Sorghum | nucleus | 31.03 | 30.95 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 19.54 | 30.91 |
| Zm00001d043784_P002 | Maize | nucleus | 30.17 | 30.35 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 32.76 | 30.0 |
| Zm00001d011636_P001 | Maize | nucleus | 29.02 | 29.88 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 29.6 | 29.6 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 30.46 | 29.44 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 29.02 | 28.94 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 28.74 | 28.9 |
| HORVU3Hr1G064370.1 | Barley | plastid | 31.32 | 28.31 |
| Os05t0550000-00 | Rice | nucleus | 29.31 | 28.02 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 27.87 | 25.8 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 28.16 | 25.52 |
| HORVU1Hr1G082970.1 | Barley | plastid | 26.15 | 24.14 |
| CDX97032 | Canola | plastid | 21.26 | 22.09 |
| CDY13429 | Canola | cytosol | 16.09 | 21.71 |
| CDY71882 | Canola | plastid | 21.26 | 21.14 |
| CDX85750 | Canola | nucleus | 21.55 | 19.43 |
| CDX77848 | Canola | nucleus | 10.92 | 17.92 |
| CDY67192 | Canola | nucleus | 10.92 | 17.84 |
| CDY40109 | Canola | nucleus | 9.48 | 17.74 |
| CDX78393 | Canola | nucleus | 23.28 | 16.4 |
| CDX95473 | Canola | nucleus | 21.84 | 16.38 |
| CDX91624 | Canola | nucleus | 10.34 | 16.36 |
| CDY68658 | Canola | nucleus | 21.55 | 15.99 |
| CDY27083 | Canola | nucleus | 10.06 | 15.98 |
| CDY32973 | Canola | nucleus | 18.68 | 15.85 |
| CDX88140 | Canola | nucleus | 21.84 | 15.77 |
| CDY31919 | Canola | nucleus | 12.36 | 15.75 |
| CDY00512 | Canola | nucleus | 12.36 | 15.75 |
| CDX91625 | Canola | cytosol | 10.34 | 15.72 |
| CDX97044 | Canola | nucleus | 22.41 | 15.29 |
| CDY53710 | Canola | nucleus | 10.63 | 15.29 |
| CDX70363 | Canola | nucleus | 21.26 | 15.23 |
| CDY43590 | Canola | nucleus | 18.39 | 15.2 |
| CDX93901 | Canola | nucleus | 10.34 | 15.0 |
| CDX69813 | Canola | mitochondrion | 22.41 | 14.63 |
| CDX97629 | Canola | nucleus | 18.39 | 14.51 |
| CDY68521 | Canola | nucleus | 18.1 | 14.29 |
| CDX82450 | Canola | nucleus | 17.82 | 13.84 |
| CDY55435 | Canola | nucleus | 20.69 | 13.64 |
| CDX79718 | Canola | nucleus | 20.69 | 13.56 |
| CDX75805 | Canola | cytosol | 17.24 | 13.54 |
| CDY27082 | Canola | cytosol | 9.2 | 13.45 |
| CDY46757 | Canola | nucleus | 20.11 | 13.13 |
| CDY24110 | Canola | nucleus | 17.24 | 13.04 |
| CDY63645 | Canola | nucleus | 17.24 | 12.99 |
| CDY26006 | Canola | nucleus | 17.24 | 12.99 |
| CDY68424 | Canola | nucleus | 19.83 | 12.85 |
| CDY62314 | Canola | nucleus | 21.84 | 12.84 |
| CDY17114 | Canola | nucleus | 19.54 | 12.81 |
| CDY37230 | Canola | nucleus | 21.55 | 12.73 |
| CDY13433 | Canola | nucleus | 16.67 | 12.45 |
| CDY25871 | Canola | nucleus | 16.95 | 12.34 |
| CDY17061 | Canola | nucleus | 21.26 | 12.21 |
| CDY43220 | Canola | nucleus | 21.26 | 12.15 |
| CDY55839 | Canola | nucleus | 16.95 | 12.07 |
| CDY24595 | Canola | nucleus | 10.92 | 12.06 |
| CDY25357 | Canola | nucleus | 10.92 | 11.88 |
| CDY22376 | Canola | nucleus | 20.98 | 11.87 |
| CDX71531 | Canola | nucleus | 21.55 | 11.77 |
| CDY33429 | Canola | nucleus | 10.63 | 11.21 |
| CDY42218 | Canola | nucleus | 10.63 | 11.08 |
| CDY69560 | Canola | nucleus | 7.47 | 5.11 |
| CDY47948 | Canola | nucleus | 6.32 | 4.37 |
| CDY36635 | Canola | nucleus | 6.61 | 3.86 |
Protein Annotations
| EnsemblPlants:CDY11092 | EnsemblPlantsGene:GSBRNA2T00049062001 | Gene3D:3.30.40.10 | GO:A0A078FDM5 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF98 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY11092 | ProteinID:CDY11092.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE808C |
| UniProt:A0A078FDM5 | MapMan:35.1 | : | : | : | : |
Description
BnaC06g23440DBnaC06g23440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDM5]
Coordinates
chrLK032009:+:223117..224750
Molecular Weight (calculated)
38830.9 Da
IEP (calculated)
8.905
GRAVY (calculated)
-0.761
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVSGDPSSS STTIRHQPMN FPPFPTADEP LIPKPSRICK SAMSTFFLLP SSSNEPNNRR KGKKPNPFTQ TTSSFRSLGC TSSASQRVSV PAVIRSSANW
101: DASDAKSKKT KSKGCSYSGG GSVKILSEAD RSGCGPVPDV WCGPGVEFST DAVVSGTVES EPPRRNIPAR RKIDGEGSSV PPRRSHNHET SLYFDSDMTS
201: RDEQTQTLFS DRYHRHLRQP YPNGLDEMMM IKNGFVMGRM LNSHDHFRDL RLNVDGMSYE QLLELGDRIG YVDTGLNEKQ IKTCLLRVKP SHKATSREDR
301: KCSICQEEYE GEDEVGKLRC GHKYHIDCAR QWLLRKNSCP VCKTMPFA
101: DASDAKSKKT KSKGCSYSGG GSVKILSEAD RSGCGPVPDV WCGPGVEFST DAVVSGTVES EPPRRNIPAR RKIDGEGSSV PPRRSHNHET SLYFDSDMTS
201: RDEQTQTLFS DRYHRHLRQP YPNGLDEMMM IKNGFVMGRM LNSHDHFRDL RLNVDGMSYE QLLELGDRIG YVDTGLNEKQ IKTCLLRVKP SHKATSREDR
301: KCSICQEEYE GEDEVGKLRC GHKYHIDCAR QWLLRKNSCP VCKTMPFA
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.