Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014732 | Potato | nucleus | 97.42 | 97.16 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 55.04 | 57.41 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 40.31 | 51.15 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 25.06 | 48.5 |
| KRH41763 | Soybean | nucleus | 46.51 | 47.75 |
| KRH48568 | Soybean | nucleus | 42.12 | 46.05 |
| KRH39137 | Soybean | nucleus | 41.86 | 43.9 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 38.76 | 43.48 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 41.09 | 43.32 |
| OQU87370 | Sorghum | nucleus | 39.02 | 43.27 |
| Zm00001d011636_P001 | Maize | nucleus | 37.47 | 42.9 |
| CDY60141 | Canola | plastid | 39.53 | 42.86 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 37.98 | 42.86 |
| Bra015967.1-P | Field mustard | nucleus | 39.53 | 42.86 |
| CDX73013 | Canola | plastid | 39.28 | 42.82 |
| Zm00001d043784_P002 | Maize | nucleus | 38.24 | 42.77 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 38.76 | 42.73 |
| CDY11092 | Canola | cytosol, plastid | 37.98 | 42.24 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 36.95 | 42.18 |
| KRH60461 | Soybean | nucleus | 46.51 | 41.76 |
| CDX68213 | Canola | nucleus, plastid | 36.95 | 40.97 |
| CDX83878 | Canola | nucleus | 37.47 | 40.62 |
| Bra016574.1-P | Field mustard | nucleus | 36.95 | 39.94 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 34.37 | 39.82 |
| CDX96741 | Canola | nucleus | 37.21 | 39.56 |
| AT1G17970.1 | Thale cress | nucleus | 35.92 | 37.77 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 21.45 | 37.73 |
| HORVU3Hr1G064370.1 | Barley | plastid | 37.47 | 37.66 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 33.07 | 37.65 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 35.92 | 36.58 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 32.56 | 36.21 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 32.56 | 36.1 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 32.04 | 35.84 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 32.56 | 35.0 |
| Os05t0550000-00 | Rice | nucleus | 32.56 | 34.62 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 33.07 | 33.33 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 32.04 | 32.98 |
| HORVU1Hr1G082970.1 | Barley | plastid | 29.46 | 30.24 |
| AT4G00070.1 | Thale cress | nucleus | 12.4 | 26.82 |
| Solyc12g010500.1.1 | Tomato | nucleus | 10.34 | 22.35 |
| Solyc11g062260.1.1 | Tomato | nucleus | 12.4 | 19.51 |
| Solyc03g026150.2.1 | Tomato | nucleus | 10.85 | 17.72 |
| AT1G36950.1 | Thale cress | cytosol | 10.34 | 17.7 |
| Solyc12g019190.1.1 | Tomato | mitochondrion | 9.82 | 17.27 |
| Solyc12g019200.1.1 | Tomato | mitochondrion | 9.82 | 17.27 |
| Solyc09g007620.1.1 | Tomato | nucleus | 7.49 | 16.57 |
| Solyc08g006460.2.1 | Tomato | nucleus | 21.96 | 16.01 |
| Solyc12g096420.1.1 | Tomato | nucleus | 21.45 | 15.06 |
| Solyc09g007530.2.1 | Tomato | nucleus | 19.38 | 13.84 |
| Solyc04g078680.2.1 | Tomato | nucleus | 25.32 | 13.57 |
| Solyc12g088740.1.1 | Tomato | nucleus | 24.29 | 13.56 |
| Solyc10g007140.2.1 | Tomato | nucleus | 17.31 | 12.91 |
| Solyc12g014070.1.1 | Tomato | nucleus | 17.83 | 12.9 |
| Solyc01g107930.2.1 | Tomato | nucleus | 22.74 | 12.26 |
| Solyc01g107940.2.1 | Tomato | nucleus | 21.96 | 12.02 |
| Solyc10g050170.1.1 | Tomato | mitochondrion, nucleus | 21.96 | 11.71 |
| Solyc01g087060.2.1 | Tomato | nucleus | 11.11 | 11.62 |
| Solyc07g062720.1.1 | Tomato | nucleus | 17.57 | 8.77 |
| Solyc02g005480.2.1 | Tomato | nucleus | 5.17 | 7.46 |
Protein Annotations
| EnsemblPlants:Solyc03g118840.2.1 | EnsemblPlantsGene:Solyc03g118840.2 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF98 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0001AB440F | UniProt:K4BM33 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3:+:67639678..67643194
Molecular Weight (calculated)
42642.2 Da
IEP (calculated)
8.598
GRAVY (calculated)
-0.561
Length
387 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVVFSESST VSEQIRYRKP RTQNQQETQD MDPVSSSSRS TKPTISSLLL APFSPTSPIH ENSTTPSAST VFSTKKKNFA TFRGLGCTAS PQVSVPAVIR
101: TSADWDSKRI KKKKQNSNKN KSLNSAVNVG GGVSIGCSSN SVQNNNPSSS SSSSGPLSLS SSCVAVPDVW CGPGIGLTTD AASVDCVVSR RPVSGRGRIE
201: SDKATPRERS ACPIRRMVSP EDNPFLDIES SLGIPRSQIE LFASRHHRHS RHGYSEGLAE IVMLQNSLMG GRTDGLDRYR NWRLDVDNMS YEELLELGDR
301: IGYVNTGLRE DEIARCVRRT KPFFLSNLSL IRTELERQCT ICQEEYEAED EMGKLDCGHF YHIRCIKQWL SQKNSCPVCK SAAMSNS
101: TSADWDSKRI KKKKQNSNKN KSLNSAVNVG GGVSIGCSSN SVQNNNPSSS SSSSGPLSLS SSCVAVPDVW CGPGIGLTTD AASVDCVVSR RPVSGRGRIE
201: SDKATPRERS ACPIRRMVSP EDNPFLDIES SLGIPRSQIE LFASRHHRHS RHGYSEGLAE IVMLQNSLMG GRTDGLDRYR NWRLDVDNMS YEELLELGDR
301: IGYVNTGLRE DEIARCVRRT KPFFLSNLSL IRTELERQCT ICQEEYEAED EMGKLDCGHF YHIRCIKQWL SQKNSCPVCK SAAMSNS
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.