Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d043784_P002 | Maize | nucleus | 87.87 | 85.84 |
| OQU87370 | Sorghum | nucleus | 88.46 | 85.67 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 46.75 | 79.0 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 80.47 | 78.84 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 79.59 | 78.43 |
| HORVU3Hr1G064370.1 | Barley | plastid | 80.18 | 70.39 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 59.47 | 60.18 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 57.99 | 57.65 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 59.47 | 52.89 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 57.1 | 50.26 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 45.56 | 42.78 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 44.97 | 40.97 |
| Solyc03g118840.2.1 | Tomato | nucleus | 42.9 | 37.47 |
| PGSC0003DMT400014732 | Potato | nucleus | 42.6 | 37.11 |
| KRH48568 | Soybean | nucleus | 38.17 | 36.44 |
| PGSC0003DMT400078539 | Potato | plastid | 26.63 | 36.14 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 37.28 | 35.9 |
| KRH39137 | Soybean | nucleus | 38.76 | 35.5 |
| KRH41763 | Soybean | nucleus | 39.05 | 35.01 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 31.36 | 34.75 |
| CDX73013 | Canola | plastid | 33.14 | 31.55 |
| Bra015967.1-P | Field mustard | nucleus | 32.84 | 31.09 |
| CDY60141 | Canola | plastid | 32.84 | 31.09 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 30.77 | 30.68 |
| CDX83878 | Canola | nucleus | 32.25 | 30.53 |
| CDX96741 | Canola | nucleus | 32.84 | 30.49 |
| Bra016574.1-P | Field mustard | nucleus | 32.25 | 30.45 |
| KRH60461 | Soybean | nucleus | 38.46 | 30.16 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 19.53 | 30.0 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 32.54 | 29.97 |
| Zm00001d026446_P001 | Maize | cytosol | 16.27 | 29.89 |
| CDX68213 | Canola | nucleus, plastid | 30.47 | 29.51 |
| CDY11092 | Canola | cytosol, plastid | 29.88 | 29.02 |
| AT1G17970.1 | Thale cress | nucleus | 29.88 | 27.45 |
| AT4G00070.1 | Thale cress | nucleus | 13.61 | 25.7 |
| Zm00001d015453_P001 | Maize | cytosol | 9.47 | 24.81 |
| Zm00001d013776_P001 | Maize | cytosol | 9.17 | 24.03 |
| Zm00001d019616_P001 | Maize | cytosol | 9.17 | 24.03 |
| Zm00001d021225_P002 | Maize | cytosol | 12.43 | 24.0 |
| Zm00001d024406_P002 | Maize | nucleus | 20.41 | 19.27 |
| Zm00001d026248_P001 | Maize | nucleus | 21.6 | 19.21 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 22.19 | 18.89 |
| Zm00001d048301_P001 | Maize | cytosol | 12.72 | 17.84 |
| AT1G36950.1 | Thale cress | cytosol | 11.83 | 17.7 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 14.5 | 17.07 |
| Zm00001d045517_P001 | Maize | mitochondrion, nucleus | 13.02 | 16.42 |
| Zm00001d027868_P004 | Maize | cytosol | 12.13 | 15.19 |
| Zm00001d009571_P002 | Maize | nucleus | 22.49 | 14.84 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 13.61 | 14.29 |
| Zm00001d014609_P002 | Maize | nucleus | 23.96 | 13.85 |
| Zm00001d006226_P001 | Maize | peroxisome | 13.02 | 13.84 |
| Zm00001d011541_P004 | Maize | nucleus | 21.3 | 13.58 |
| Zm00001d015323_P002 | Maize | cytosol | 4.44 | 13.27 |
| Zm00001d015289_P001 | Maize | nucleus | 22.19 | 13.25 |
| Zm00001d002624_P003 | Maize | cytosol | 12.72 | 12.8 |
| Zm00001d008649_P003 | Maize | cytosol | 19.53 | 12.52 |
| Zm00001d004300_P003 | Maize | nucleus | 25.44 | 12.39 |
| Zm00001d025027_P002 | Maize | nucleus | 25.44 | 12.36 |
| Zm00001d026445_P001 | Maize | nucleus | 23.67 | 12.21 |
| Zm00001d039769_P002 | Maize | cytosol | 19.53 | 11.98 |
| Zm00001d002080_P002 | Maize | nucleus | 23.37 | 11.92 |
| Zm00001d039015_P002 | Maize | cytosol | 11.83 | 9.78 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 11.54 | 6.34 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1D6G2P2 | ProteinID:AQK97634.1 | ProteinID:AQK97635.1 | InterPro:IPR001841 |
| InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF63 | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI0008457D6A | EnsemblPlantsGene:Zm00001d011636 | EnsemblPlants:Zm00001d011636_P001 | EnsemblPlants:Zm00001d011636_T001 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
Protein binding protein%3B Putative RING zinc finger domain superfamily protein
Coordinates
chr8:-:156956138..156961395
Molecular Weight (calculated)
36913.9 Da
IEP (calculated)
9.900
GRAVY (calculated)
-0.612
Length
338 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGDRSSTAE RRRGIRRLLL HPRGEASSPP PPPPAPAPEE GRRKGFASAA LRGLGCTSAA ASKAYAPGAA AAAALRSSAD WHGRRRRRGK DRRKERGGGG
101: AGAGGGLVTG GIGADVWCAP GIPFAAEASS VDCVVARHQT VGRGGRGAEG ERSHRERPCM SRRATVQEQI SSPFMDSPPP HLDAPFFGAD LIPSGRLRRM
201: RGYRYSPGGL EEEIMMFQTR VLLGGMNMYD RYQDWRLDVD NMTYEELVEL GDRIGYVNTG LREDEIARSL RKAKHPSFGS LRFAAEVERK CTICQEEFQS
301: NEEMGRLVCG HSYHVLCIKQ WLSQKNTCPV CKTAVSKN
101: AGAGGGLVTG GIGADVWCAP GIPFAAEASS VDCVVARHQT VGRGGRGAEG ERSHRERPCM SRRATVQEQI SSPFMDSPPP HLDAPFFGAD LIPSGRLRRM
201: RGYRYSPGGL EEEIMMFQTR VLLGGMNMYD RYQDWRLDVD NMTYEELVEL GDRIGYVNTG LREDEIARSL RKAKHPSFGS LRFAAEVERK CTICQEEFQS
301: NEEMGRLVCG HSYHVLCIKQ WLSQKNTCPV CKTAVSKN
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [nucleus,plastid]
SUBAcon: [nucleus,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.