Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG40075 | Sorghum | cytosol | 84.81 | 91.97 |
| Os03t0173900-01 | Rice | nucleus | 79.26 | 85.6 |
| TraesCS4A01G112900.1 | Wheat | nucleus | 74.44 | 80.4 |
| Zm00001d048301_P001 | Maize | cytosol | 70.0 | 78.42 |
| TraesCS4B01G191300.1 | Wheat | nucleus | 74.44 | 76.72 |
| TraesCS4D01G192500.2 | Wheat | cytosol, nucleus, vacuole | 71.85 | 71.85 |
| GSMUA_Achr8P31290_001 | Banana | nucleus | 54.81 | 58.5 |
| HORVU4Hr1G055690.5 | Barley | peroxisome, plastid | 75.19 | 57.67 |
| VIT_06s0004g01930.t01 | Wine grape | nucleus | 47.78 | 51.19 |
| KRH24699 | Soybean | nucleus | 45.56 | 49.6 |
| KRH29702 | Soybean | nucleus | 45.56 | 49.6 |
| Solyc11g062260.1.1 | Tomato | nucleus | 44.44 | 48.78 |
| PGSC0003DMT400082375 | Potato | nucleus | 44.07 | 48.37 |
| Zm00001d021225_P002 | Maize | cytosol | 27.04 | 41.71 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 27.41 | 25.78 |
| Zm00001d045517_P001 | Maize | mitochondrion, nucleus | 25.56 | 25.75 |
| Zm00001d006226_P001 | Maize | peroxisome | 28.89 | 24.53 |
| Zm00001d002624_P003 | Maize | cytosol | 30.37 | 24.4 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 27.04 | 22.67 |
| Zm00001d026446_P001 | Maize | cytosol | 14.81 | 21.74 |
| Zm00001d015453_P001 | Maize | cytosol | 8.15 | 17.05 |
| Zm00001d013776_P001 | Maize | cytosol | 7.78 | 16.28 |
| Zm00001d019616_P001 | Maize | cytosol | 7.78 | 16.28 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 17.41 | 12.24 |
| Zm00001d043784_P002 | Maize | nucleus | 15.56 | 12.14 |
| Zm00001d011636_P001 | Maize | nucleus | 15.19 | 12.13 |
| Zm00001d024406_P002 | Maize | nucleus | 15.19 | 11.45 |
| Zm00001d026248_P001 | Maize | nucleus | 15.19 | 10.79 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 15.56 | 10.58 |
| Zm00001d009571_P002 | Maize | nucleus | 18.89 | 9.96 |
| Zm00001d011541_P004 | Maize | nucleus | 18.52 | 9.43 |
| Zm00001d015323_P002 | Maize | cytosol | 3.7 | 8.85 |
| Zm00001d015289_P001 | Maize | nucleus | 17.41 | 8.3 |
| Zm00001d008649_P003 | Maize | cytosol | 15.56 | 7.97 |
| Zm00001d014609_P002 | Maize | nucleus | 17.04 | 7.86 |
| Zm00001d025027_P002 | Maize | nucleus | 20.0 | 7.76 |
| Zm00001d002080_P002 | Maize | nucleus | 18.89 | 7.69 |
| Zm00001d026445_P001 | Maize | nucleus | 18.52 | 7.63 |
| Zm00001d039769_P002 | Maize | cytosol | 15.56 | 7.62 |
| Zm00001d004300_P003 | Maize | nucleus | 18.52 | 7.2 |
| Zm00001d039015_P002 | Maize | cytosol | 10.37 | 6.85 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 8.15 | 3.58 |
Protein Annotations
| EntrezGene:103631781 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1D6JQ71 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0016874 | InterPro:IPR001841 | InterPro:IPR013083 | ProteinID:ONL94136.1 | ProteinID:ONL94137.1 | PFAM:PF13639 |
| PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF170 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI00084350E1 |
| EnsemblPlantsGene:Zm00001d027868 | EnsemblPlants:Zm00001d027868_P004 | EnsemblPlants:Zm00001d027868_T004 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
E3 ubiquitin ligase BIG BROTHER
Coordinates
chr1:+:15763116..15768449
Molecular Weight (calculated)
30817.3 Da
IEP (calculated)
5.833
GRAVY (calculated)
-0.459
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSSRQMELH YINTGFPYTI TESFMDFFEG LTYAHADFAL TDGFQDQGNP YWAMMHTNSY KYGYSGPGNY YSYAHVYDID DYMRRADGGR RIWDNTTPVN
101: NVDSANVVLQ GGEAPHTTTN TINKECIQQV HQSPGSPQVV WQDNIEPDNM TYEIIFFVCA LYGALSFITQ ELLDLGEAVG TQSRGLSQER ISSLPVTKYK
201: CGFFSRKKTR RERCVICQME YRRGNLQMTL PCKHVYHASC VTRWLGINKV CPVCFAEVPG EDPEAMSQQL
101: NVDSANVVLQ GGEAPHTTTN TINKECIQQV HQSPGSPQVV WQDNIEPDNM TYEIIFFVCA LYGALSFITQ ELLDLGEAVG TQSRGLSQER ISSLPVTKYK
201: CGFFSRKKTR RERCVICQME YRRGNLQMTL PCKHVYHASC VTRWLGINKV CPVCFAEVPG EDPEAMSQQL
001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
Arabidopsis Description
BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.