Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH29702 | Soybean | nucleus | 96.37 | 96.37 |
| VIT_06s0004g01930.t01 | Wine grape | nucleus | 68.55 | 67.46 |
| Solyc11g062260.1.1 | Tomato | nucleus | 58.87 | 59.35 |
| PGSC0003DMT400082375 | Potato | nucleus | 57.66 | 58.13 |
| GSMUA_Achr4P03550_001 | Banana | mitochondrion | 13.31 | 55.0 |
| Os03t0173900-01 | Rice | nucleus | 52.42 | 52.0 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 50.81 | 51.01 |
| KRH20832 | Soybean | nucleus | 50.4 | 50.61 |
| KXG40075 | Sorghum | cytosol | 50.4 | 50.2 |
| TraesCS4A01G112900.1 | Wheat | nucleus | 48.79 | 48.4 |
| GSMUA_Achr4P13930_001 | Banana | nucleus | 47.98 | 47.98 |
| GSMUA_Achr8P31290_001 | Banana | nucleus | 48.39 | 47.43 |
| TraesCS4B01G191300.1 | Wheat | nucleus | 48.79 | 46.18 |
| Zm00001d048301_P001 | Maize | cytosol | 44.76 | 46.06 |
| GSMUA_Achr4P03540_001 | Banana | nucleus | 36.29 | 45.69 |
| Zm00001d027868_P004 | Maize | cytosol | 49.6 | 45.56 |
| TraesCS4D01G192500.2 | Wheat | cytosol, nucleus, vacuole | 47.18 | 43.33 |
| KRH05664 | Soybean | nucleus | 17.34 | 35.54 |
| HORVU4Hr1G055690.5 | Barley | peroxisome, plastid | 49.19 | 34.66 |
| KRH53246 | Soybean | nucleus | 23.79 | 32.24 |
| KRH64669 | Soybean | nucleus | 24.6 | 30.2 |
| KRH17980 | Soybean | nucleus | 22.98 | 28.08 |
| KRH16389 | Soybean | nucleus | 22.18 | 26.83 |
| KRG90628 | Soybean | nucleus | 27.42 | 20.3 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 25.0 | 17.46 |
| KRH48568 | Soybean | nucleus | 19.35 | 13.56 |
| KRH55165 | Soybean | nucleus | 16.53 | 13.18 |
| KRH39137 | Soybean | nucleus | 18.95 | 12.74 |
| KRH30071 | Soybean | cytosol | 17.34 | 12.5 |
| KRG95955 | Soybean | nucleus | 27.02 | 12.2 |
| KRH67668 | Soybean | nucleus | 26.61 | 11.98 |
| KRH41763 | Soybean | nucleus | 17.74 | 11.67 |
| KRH32434 | Soybean | nucleus | 24.19 | 11.13 |
| KRH19845 | Soybean | nucleus | 24.6 | 11.09 |
| KRH26195 | Soybean | nucleus | 20.16 | 10.92 |
| KRH60461 | Soybean | nucleus | 18.15 | 10.44 |
| KRH55161 | Soybean | nucleus | 18.95 | 10.26 |
| KRH55090 | Soybean | nucleus | 15.32 | 10.22 |
| KRH04957 | Soybean | nucleus | 21.77 | 10.15 |
| KRH16134 | Soybean | nucleus | 21.77 | 9.73 |
| KRH52597 | Soybean | nucleus | 20.56 | 9.43 |
| KRH04591 | Soybean | nucleus | 12.5 | 9.2 |
| KRH22017 | Soybean | nucleus | 19.35 | 9.09 |
| KRH04592 | Soybean | nucleus | 12.1 | 8.98 |
| KRH61306 | Soybean | nucleus | 20.97 | 7.95 |
| KRH61936 | Soybean | nucleus | 17.34 | 7.72 |
| KRH52013 | Soybean | nucleus | 21.77 | 7.63 |
| KRH61311 | Soybean | nucleus | 21.77 | 7.36 |
| KRH70661 | Soybean | mitochondrion, nucleus | 19.76 | 6.72 |
| KRH50319 | Soybean | nucleus | 19.35 | 6.71 |
| KRH05663 | Soybean | cytosol | 8.06 | 3.44 |
Protein Annotations
| EntrezGene:100805963 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02007182 | EnsemblPlantsGene:GLYMA_12G057100 | GO:GO:0000003 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | GO:GO:0043161 | GO:GO:0048437 | GO:GO:0061630 | UniProt:I1LQI9 | InterPro:IPR001841 |
| InterPro:IPR013083 | ProteinID:KRH24698.1 | EnsemblPlants:KRH24699 | ProteinID:KRH24699 | ProteinID:KRH24699.1 | ProteinID:KRH24700.1 |
| PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF170 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00023D0180 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | : | : | : |
Description
hypothetical protein
Coordinates
chr12:+:4152267..4157200
Molecular Weight (calculated)
28651.1 Da
IEP (calculated)
6.503
GRAVY (calculated)
-0.794
Length
248 amino acids
Sequence
(BLAST)
(BLAST)
001: MSWNPHMELH YNTISYPYNT AGSFIEYFEG LTYEHVNFIF SGASHAQESS YPSNSSFYKF GISEPVNTSY YRYGHGYEVN HHEPLVDEYR RPSENSLTIN
101: EQSAAVSTEW VEGGNTGTRD NSIECPRRHH SNSNDYQVIW QDNIDPDNMT YEELLELGEA VGTQSRGLTQ EQISSLPVSK YKCGFFLRKK SRDERCVICQ
201: MEYKRGDKRI TLPCKHVYHA SCGNKWLSIN KACPICYTEV FADKSKHK
101: EQSAAVSTEW VEGGNTGTRD NSIECPRRHH SNSNDYQVIW QDNIDPDNMT YEELLELGEA VGTQSRGLTQ EQISSLPVSK YKCGFFLRKK SRDERCVICQ
201: MEYKRGDKRI TLPCKHVYHA SCGNKWLSIN KACPICYTEV FADKSKHK
001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
Arabidopsis Description
BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.