Skip to main content
crop-pal logo
Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr4P13930_001 Banana nucleus 75.63 60.08
GSMUA_Achr8P31290_001 Banana nucleus 58.88 45.85
KRH29702 Soybean nucleus 46.19 36.69
KRH24699 Soybean nucleus 45.69 36.29
PGSC0003DMT400082375 Potato nucleus 44.16 35.37
VIT_06s0004g01930.t01 Wine grape nucleus 45.18 35.32
Solyc11g062260.1.1 Tomato nucleus 43.15 34.55
GSMUA_AchrUn_... Banana nucleus 11.17 19.64
GSMUA_Achr3P26700_001 Banana nucleus 27.41 18.49
GSMUA_Achr4P05140_001 Banana nucleus 26.4 17.57
GSMUA_Achr4P06090_001 Banana cytosol 12.18 16.33
GSMUA_Achr4P30500_001 Banana nucleus 27.92 16.22
GSMUA_Achr9P24150_001 Banana nucleus 22.84 14.95
GSMUA_Achr4P04290_001 Banana nucleus 16.75 14.86
GSMUA_Achr4P04180_001 Banana mitochondrion, nucleus, peroxisome, plastid 21.32 13.68
GSMUA_AchrUn_... Banana nucleus 12.69 11.11
GSMUA_Achr9P21480_001 Banana plastid 14.21 8.24
GSMUA_Achr4P11130_001 Banana nucleus, plastid 13.2 7.78
GSMUA_Achr11P... Banana cytosol, nucleus, peroxisome 19.8 7.62
GSMUA_Achr1P23200_001 Banana nucleus 13.71 7.5
GSMUA_Achr3P13740_001 Banana nucleus 16.24 6.53
GSMUA_Achr6P03840_001 Banana nucleus 12.18 6.47
GSMUA_Achr5P08460_001 Banana nucleus 18.78 6.45
GSMUA_Achr1P23500_001 Banana nucleus 16.75 6.42
GSMUA_Achr3P29390_001 Banana golgi, plastid 12.18 6.32
GSMUA_Achr4P12850_001 Banana nucleus 13.71 5.92
GSMUA_Achr9P11290_001 Banana nucleus 20.3 5.74
GSMUA_Achr3P05160_001 Banana nucleus 16.24 5.43
GSMUA_Achr4P06080_001 Banana nucleus 12.18 5.18
GSMUA_Achr10P... Banana nucleus 13.2 5.14
GSMUA_Achr9P22530_001 Banana nucleus 15.74 4.81
GSMUA_Achr8P15680_001 Banana nucleus 17.26 4.72
GSMUA_Achr7P15850_001 Banana nucleus 14.72 4.46
GSMUA_Achr4P03550_001 Banana mitochondrion 1.02 3.33
Protein Annotations
EnsemblPlants:GSMUA_Achr4P03540_001EnsemblPlants:GSMUA_Achr4T03540_001EnsemblPlantsGene:GSMUA_Achr4G03540_001PANTHER:PTHR14155PANTHER:PTHR14155:SF170SEG:seg
UniParc:UPI0002958DF0UniProt:M0SKS1MapMan:35.1:::
Description
Putative E3 ubiquitin ligase BIG BROTHER [Source:GMGC_GENE;Acc:GSMUA_Achr4G03540_001]
Coordinates
chr4:+:2814232..2818906
Molecular Weight (calculated)
22804.2 Da
IEP (calculated)
6.225
GRAVY (calculated)
-0.945
Length
197 amino acids
Sequence
(BLAST)
001: MDGNRQMEVH YINTGFPYTV TESFMDLFEG LTYAQADTAL AEVLHDQGNT YWSMMYANPY KYEFSGSSTN SYYDFGHTYE INDHTQRLDE GRRAWHNPTV
101: LNNIDLPQQA QHGNEVHHAS RNPGAEERTR VHRNSSGSQV IWHDNIDPDN MTYEELLELG EAIGTHSRGL TQERIASLPV KKYKCSLFSK KKTRHER
Best Arabidopsis Sequence Match ( AT3G63530.1 )
(BLAST)
001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
Arabidopsis Description
BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.