Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P26700_001 | Banana | nucleus | 76.69 | 77.74 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 67.91 | 65.47 |
| OQU80744 | Sorghum | mitochondrion | 28.72 | 59.03 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 22.64 | 56.78 |
| TraesCS7A01G271500.1 | Wheat | cytosol, mitochondrion, nucleus | 55.07 | 56.6 |
| EER97094 | Sorghum | nucleus | 60.81 | 55.56 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 54.05 | 53.16 |
| Os09t0535100-01 | Rice | nucleus | 58.11 | 52.92 |
| Os08t0548300-01 | Rice | nucleus | 54.39 | 52.79 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 60.14 | 52.35 |
| TraesCS7D01G271800.4 | Wheat | cytosol, mitochondrion, nucleus | 53.04 | 52.33 |
| EES15239 | Sorghum | nucleus | 55.41 | 52.23 |
| Zm00001d006226_P001 | Maize | peroxisome | 55.74 | 51.89 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 56.42 | 51.86 |
| TraesCS7B01G170500.1 | Wheat | cytosol, mitochondrion, nucleus | 52.36 | 51.84 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 21.28 | 51.64 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 38.51 | 51.35 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 51.69 | 51.17 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 59.8 | 51.16 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 52.36 | 50.32 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 47.64 | 49.13 |
| CDY25357 | Canola | nucleus | 51.69 | 47.81 |
| CDY24595 | Canola | nucleus | 50.68 | 47.62 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 60.14 | 47.09 |
| Bra022466.1-P | Field mustard | nucleus | 51.35 | 46.91 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 57.43 | 45.95 |
| AT3G19910.1 | Thale cress | nucleus | 52.36 | 45.59 |
| KRG90628 | Soybean | nucleus | 51.35 | 45.37 |
| Bra038240.1-P | Field mustard | nucleus | 51.01 | 45.35 |
| CDY42218 | Canola | nucleus | 51.01 | 45.21 |
| CDY33429 | Canola | nucleus | 50.34 | 45.15 |
| GSMUA_Achr4P03550_001 | Banana | mitochondrion | 9.12 | 45.0 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 51.01 | 42.54 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.84 | 33.93 |
| GSMUA_Achr4P13930_001 | Banana | nucleus | 27.36 | 32.66 |
| GSMUA_Achr8P31290_001 | Banana | nucleus | 25.68 | 30.04 |
| GSMUA_Achr4P06090_001 | Banana | cytosol | 13.85 | 27.89 |
| GSMUA_Achr4P03540_001 | Banana | nucleus | 17.57 | 26.4 |
| GSMUA_Achr4P30500_001 | Banana | nucleus | 25.68 | 22.42 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.51 | 17.78 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 14.86 | 12.94 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 14.19 | 12.57 |
| GSMUA_Achr6P03840_001 | Banana | nucleus | 15.2 | 12.13 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 15.54 | 12.11 |
| GSMUA_Achr3P13740_001 | Banana | nucleus | 19.93 | 12.04 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 14.53 | 11.94 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 20.27 | 11.72 |
| GSMUA_Achr4P12850_001 | Banana | nucleus | 16.55 | 10.75 |
| GSMUA_Achr5P08460_001 | Banana | nucleus | 18.58 | 9.58 |
| GSMUA_Achr10P... | Banana | nucleus | 16.22 | 9.49 |
| GSMUA_Achr9P22530_001 | Banana | nucleus | 19.26 | 8.85 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 15.2 | 8.75 |
| GSMUA_Achr9P11290_001 | Banana | nucleus | 19.93 | 8.46 |
| GSMUA_Achr3P05160_001 | Banana | nucleus | 15.88 | 7.98 |
| GSMUA_Achr7P15850_001 | Banana | nucleus | 17.23 | 7.85 |
| GSMUA_Achr8P15680_001 | Banana | nucleus | 18.58 | 7.64 |
| GSMUA_Achr4P06080_001 | Banana | nucleus | 11.15 | 7.13 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P05140_001 | EnsemblPlants:GSMUA_Achr4T05140_001 | EnsemblPlantsGene:GSMUA_Achr4G05140_001 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF166 | PFAM:PF13639 | PFscan:PS50089 |
| SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0002959E11 | UniProt:M0SL81 | MapMan:35.1 |
Description
E3 ubiquitin ligase BIG BROTHER-related [Source:GMGC_GENE;Acc:GSMUA_Achr4G05140_001]
Coordinates
chr4:-:3979753..3983429
Molecular Weight (calculated)
31781.1 Da
IEP (calculated)
3.637
GRAVY (calculated)
-0.793
Length
296 amino acids
Sequence
(BLAST)
(BLAST)
001: MENGQESGAG SEHATDGGNP NPNPITTSSP TAGDAPPPAE AGPPPPSPPP ARTPFTSLSQ VDADLALARA LQEQERAYAM LRMNGVDDSD YESSDAGSYD
101: YDGEEDEDGV GDEPERVVEE DDGSIEGSDY DEDAFDANDS DADPAEFEDD EAFARALQDA EEREVAVRLM ALTGLNEWAS DDHGDHGSNS QDTWQEVDPD
201: EYSYEELVAL GEVVGTESRG LSADTIAALP SVSYKAENAQ DGSAEQCVIC RLEYEEGDSL VLLSCKHKYH SECVNKWLQI NKVCPVCSAE VSTSER
101: YDGEEDEDGV GDEPERVVEE DDGSIEGSDY DEDAFDANDS DADPAEFEDD EAFARALQDA EEREVAVRLM ALTGLNEWAS DDHGDHGSNS QDTWQEVDPD
201: EYSYEELVAL GEVVGTESRG LSADTIAALP SVSYKAENAQ DGSAEQCVIC RLEYEEGDSL VLLSCKHKYH SECVNKWLQI NKVCPVCSAE VSTSER
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.