Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER97094 | Sorghum | nucleus | 76.0 | 76.23 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 77.85 | 74.41 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 71.69 | 72.36 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 76.31 | 71.68 |
| Zm00001d006226_P001 | Maize | peroxisome | 69.85 | 71.38 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 25.23 | 69.49 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 78.46 | 67.46 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 75.08 | 65.95 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 24.0 | 63.93 |
| Os08t0548300-01 | Rice | nucleus | 57.54 | 61.31 |
| GSMUA_Achr4P05140_001 | Banana | nucleus | 52.92 | 58.11 |
| GSMUA_Achr3P26700_001 | Banana | nucleus | 51.38 | 57.19 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 47.08 | 49.68 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 44.92 | 48.51 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 45.54 | 48.21 |
| KRG90628 | Soybean | nucleus | 48.31 | 46.87 |
| CDY24595 | Canola | nucleus | 43.69 | 45.08 |
| CDY25357 | Canola | nucleus | 44.0 | 44.69 |
| AT3G19910.1 | Thale cress | nucleus | 46.46 | 44.41 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 30.15 | 44.14 |
| Bra022466.1-P | Field mustard | nucleus | 44.0 | 44.14 |
| CDY42218 | Canola | nucleus | 44.92 | 43.71 |
| Bra038240.1-P | Field mustard | nucleus | 44.62 | 43.54 |
| CDY33429 | Canola | nucleus | 43.69 | 43.03 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 44.92 | 41.13 |
| Os03t0173900-01 | Rice | nucleus | 24.31 | 31.6 |
| Os04t0571200-01 | Rice | nucleus | 23.08 | 29.53 |
| Os06t0125800-01 | Rice | nucleus | 19.08 | 23.75 |
| Os05t0550000-00 | Rice | nucleus | 16.31 | 14.56 |
| Os08t0241400-00 | Rice | nucleus | 14.46 | 12.47 |
| Os04t0603200-01 | Rice | nucleus | 11.38 | 11.25 |
| Os05t0564300-01 | Rice | nucleus | 15.38 | 10.0 |
| Os01t0159300-01 | Rice | nucleus | 15.38 | 9.98 |
| Os05t0163400-03 | Rice | nucleus | 16.0 | 9.76 |
| Os01t0667700-02 | Rice | nucleus | 15.69 | 9.73 |
| Os06t0695600-01 | Rice | nucleus | 15.69 | 8.81 |
| Os02t0150700-01 | Rice | extracellular | 16.92 | 8.58 |
| Os04t0648800-01 | Rice | nucleus | 16.92 | 8.25 |
| Os04t0185500-01 | Rice | nucleus | 17.85 | 8.18 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:4347692 | EMBL:AK069888 | ProteinID:BAD34213.1 | ProteinID:BAF25692.1 |
| ProteinID:BAT09141.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 |
| GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 | EnsemblPlantsGene:Os09g0535100 | EnsemblPlants:Os09t0535100-01 | PFAM:PF13639 |
| PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF172 | UniProt:Q69JZ9 | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00003FF54F | RefSeq:XP_015651300.1 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os09t0535100-01)
Coordinates
chr9:+:21038124..21041593
Molecular Weight (calculated)
34754.8 Da
IEP (calculated)
3.796
GRAVY (calculated)
-0.662
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MADSKGSGGA AGDKPGADAS PATNPAPPAA AVAVAAAAAD AGGDDDVAAA AEARRPFTAL SQVDADLALA RVLQEQERAY MMLRMGGGVG EGSDYGSSDA
101: GSYEYDDEAE EDYEEELEHH LRVHHHEHAV GEGRGEGERD GEGAEGSEFE EEGFDEEYDE EEVEPELDPA EYEDDEAYAR ALQDAEEREV AARLMALAGI
201: SDWRPVEPVE EHANDPQDAW QEVDPDEYSY EELVALGEAV GTGHRGLSAA TLASLPSVTY KAEGVQDGNT EQCVICRVEF EDGESLIALP CKHSYHPECI
301: NQWLQINKVC PMCSAEVSTS DSNQA
101: GSYEYDDEAE EDYEEELEHH LRVHHHEHAV GEGRGEGERD GEGAEGSEFE EEGFDEEYDE EEVEPELDPA EYEDDEAYAR ALQDAEEREV AARLMALAGI
201: SDWRPVEPVE EHANDPQDAW QEVDPDEYSY EELVALGEAV GTGHRGLSAA TLASLPSVTY KAEGVQDGNT EQCVICRVEF EDGESLIALP CKHSYHPECI
301: NQWLQINKVC PMCSAEVSTS DSNQA
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.