Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G418300.1 | Wheat | cytosol | 75.98 | 76.28 |
| TraesCS2A01G400200.1 | Wheat | nucleus | 75.98 | 76.28 |
| EES11283 | Sorghum | nucleus | 72.83 | 74.9 |
| TraesCS2D01G397800.1 | Wheat | cytosol | 74.41 | 73.54 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 74.8 | 71.7 |
| Zm00001d002624_P003 | Maize | cytosol | 68.5 | 51.79 |
| GSMUA_Achr4P30500_001 | Banana | nucleus | 53.54 | 40.12 |
| VIT_12s0028g01220.t01 | Wine grape | nucleus | 31.5 | 36.53 |
| Solyc03g026150.2.1 | Tomato | nucleus | 33.86 | 36.29 |
| PGSC0003DMT400037132 | Potato | nucleus | 33.46 | 35.56 |
| Os03t0173900-01 | Rice | nucleus | 34.65 | 35.2 |
| Os06t0125800-01 | Rice | nucleus | 31.1 | 30.27 |
| AT5G52150.1 | Thale cress | cytosol, nucleus, peroxisome | 19.68 | 25.0 |
| CDX91624 | Canola | nucleus | 21.65 | 25.0 |
| CDY27083 | Canola | nucleus | 21.26 | 24.66 |
| Os08t0548300-01 | Rice | nucleus | 29.13 | 24.26 |
| Bra022579.1-P | Field mustard | cytosol | 12.2 | 23.48 |
| AT5G52155.1 | Thale cress | nucleus | 16.54 | 23.08 |
| CDY00512 | Canola | nucleus | 24.8 | 23.08 |
| Os09t0535100-01 | Rice | nucleus | 29.53 | 23.08 |
| CDY31919 | Canola | nucleus | 24.41 | 22.71 |
| Bra022580.1-P | Field mustard | cytosol | 15.75 | 22.22 |
| AT5G52140.1 | Thale cress | nucleus | 24.02 | 21.79 |
| CDX91625 | Canola | cytosol | 19.29 | 21.4 |
| CDY27082 | Canola | cytosol | 18.9 | 20.17 |
| Bra028293.1-P | Field mustard | nucleus | 16.54 | 17.57 |
| Os05t0550000-00 | Rice | nucleus | 17.32 | 12.09 |
| Os08t0241400-00 | Rice | nucleus | 17.72 | 11.94 |
| Os04t0603200-01 | Rice | nucleus | 14.57 | 11.25 |
| Os05t0163400-03 | Rice | nucleus | 21.26 | 10.13 |
| Os01t0159300-01 | Rice | nucleus | 19.68 | 9.98 |
| Os05t0564300-01 | Rice | nucleus | 19.29 | 9.8 |
| Os01t0667700-02 | Rice | nucleus | 18.9 | 9.16 |
| Os06t0695600-01 | Rice | nucleus | 18.9 | 8.29 |
| Os02t0150700-01 | Rice | extracellular | 19.68 | 7.8 |
| Os04t0648800-01 | Rice | nucleus | 19.68 | 7.5 |
| Os04t0185500-01 | Rice | nucleus | 19.29 | 6.91 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:4336715 | EMBL:AK071401 | UniProt:B7EJC9 | ProteinID:BAS90572.1 |
| InterPro:BB | ncoils:Coil | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0040007 |
| GO:GO:0043161 | GO:GO:0046621 | GO:GO:0048437 | GO:GO:0061630 | InterPro:IPR001841 | InterPro:IPR013083 |
| EnsemblPlantsGene:Os04g0571200 | EnsemblPlants:Os04t0571200-01 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF75 |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000021C9FA | RefSeq:XP_015634368.1 | RefSeq:XP_015634369.1 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
RING finger protein OsRFPH2-14, RING-H2 protein 14Similar to OSIGBa0111L12.9 protein. (Os04t0571200-01)
Coordinates
chr4:+:28744397..28747841
Molecular Weight (calculated)
28266.3 Da
IEP (calculated)
4.749
GRAVY (calculated)
-0.530
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVMHDTTGK KEVVVCYMNA PLPYMIEENY GGCFFEDDVD LAQVLQDQEI VYQLIQGNYG TGSSKTHSNP SSSYSHGCEL GERKPSGVAS YEAQLVVDEA
101: LARELQQMED QLASASIDDH NIIEHGRKPI ASSTSSGGNA SASRPPQVVM EDGIDPDNMT YEELQQLGEA IGTESKGLPE DVIALLPTST YKIRIFSRKE
201: KHDECVICCM TYKNRDRLTK LPCEHQYHQT CVTKWLKINK VCPVCNKEVY GSGK
101: LARELQQMED QLASASIDDH NIIEHGRKPI ASSTSSGGNA SASRPPQVVM EDGIDPDNMT YEELQQLGEA IGTESKGLPE DVIALLPTST YKIRIFSRKE
201: KHDECVICCM TYKNRDRLTK LPCEHQYHQT CVTKWLKINK VCPVCNKEVY GSGK
001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
Arabidopsis Description
BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.