Factsheet for Bra022579.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27083	Canola	nucleus	96.97	58.45
Bra028293.1-P	Field mustard	nucleus	40.91	22.59
Bra022580.1-P	Field mustard	cytosol	22.73	16.67
EES11283	Sorghum	nucleus	24.24	12.96
TraesCS2B01G418300.1	Wheat	cytosol	23.48	12.25
TraesCS2A01G400200.1	Wheat	nucleus	23.48	12.25
Os04t0571200-01	Rice	nucleus	23.48	12.2
TraesCS2D01G397800.1	Wheat	cytosol	23.48	12.06
Bra040450.1-P	Field mustard	nucleus	21.97	11.98
HORVU2Hr1G094980.4	Barley	cytosol	23.48	11.7
VIT_12s0028g01220.t01	Wine grape	nucleus	18.18	10.96
Solyc03g026150.2.1	Tomato	nucleus	18.94	10.55
PGSC0003DMT400037132	Potato	nucleus	18.18	10.04
Zm00001d002624_P003	Maize	cytosol	25.0	9.82
Bra019499.1-P	Field mustard	nucleus	11.36	9.15
GSMUA_Achr4P30500_001	Banana	nucleus	23.48	9.14
Bra022466.1-P	Field mustard	nucleus	19.7	8.02
Bra038240.1-P	Field mustard	nucleus	19.7	7.81
Bra016574.1-P	Field mustard	nucleus	15.15	5.59
Bra024009.1-P	Field mustard	nucleus	6.82	5.14
Bra027467.1-P	Field mustard	nucleus	15.91	5.12
Bra015967.1-P	Field mustard	nucleus	12.12	4.48
Bra003830.1-P	Field mustard	nucleus, plastid	11.36	4.42
Bra038109.1-P	Field mustard	nucleus	14.39	3.96
Bra039659.1-P	Field mustard	nucleus	13.64	3.91
Bra024007.1-P	Field mustard	nucleus	13.64	3.85
Bra015221.1-P	Field mustard	nucleus	16.67	3.69
Bra001582.1-P	Field mustard	nucleus	12.12	3.66
Bra006070.1-P	Field mustard	nucleus	13.64	3.64
Bra009015.1-P	Field mustard	plastid	14.39	3.56
Bra039842.1-P	Field mustard	nucleus	15.91	3.52
Bra023101.1-P	Field mustard	nucleus	13.64	3.38
Bra017205.1-P	Field mustard	nucleus	13.64	3.35
Bra027282.1-P	Field mustard	nucleus	10.61	3.15
Bra033652.1-P	Field mustard	nucleus	13.64	2.93
Bra014043.1-P	Field mustard	nucleus	11.36	2.6
Bra028576.1-P	Field mustard	cytosol	3.03	1.41
Bra036336.1-P	Field mustard	nucleus	5.3	1.39
Bra009800.1-P	Field mustard	nucleus	3.03	0.98

Protein Annotations

EnsemblPlants:Bra022579.1	EnsemblPlants:Bra022579.1-P	EnsemblPlantsGene:Bra022579	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	GO:GO:0040007	GO:GO:0046621	InterPro:BB	PANTHER:PTHR14155	PANTHER:PTHR14155:SF75
SEG:seg	UniParc:UPI0002546FD9	UniProt:M4E1D1	MapMan:35.2	:	:

Description

AT5G52140 (E=2e-010) | protein binding / zinc ion binding

Coordinates

chrA02:+:8760442..8761785

Molecular Weight (calculated)

14320.2 Da

IEP (calculated)

4.242

GRAVY (calculated)

-0.761

Length

132 amino acids

Sequence
(BLAST)

001: MQPNQVEIDE ALAASLLYDD PESIIYDEVT ARQIQQREEV NGSTSLHCGS SSHQQGHVGG SIDTSSHSFQ SPPPSGDVDP DNMTYEELNE LGESIGAVNK
101: GLSKSRIDQI PTYKFGASSW FRKKASSSGE TE

Best Arabidopsis Sequence Match ( AT5G52130.1 )
(BLAST)

001: MRVMMQSKQM EMDEAFAASL LYDDDQTDDQ AVAREWQNME NSLISLSDDE KFAKSLQEQE LNRSTSTQQQ SHVGSSSHDS SDDSTHSLPP DVNIDPDNMT
101: YEENRSEQST KDCRRGELAK YQLINLPRRL EREILYPKKL SKTIICMNSF KINIVISLQY FVL

Arabidopsis Description

Putative uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:Q9LTK7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.