Factsheet for Bra001582.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82450	Canola	nucleus	99.08	96.65
CDX75805	Canola	cytosol	94.28	93.0
Bra027282.1-P	Field mustard	nucleus	63.62	62.47
AT3G15070.1	Thale cress	nucleus	62.93	56.58
Bra039659.1-P	Field mustard	nucleus	47.6	45.22
Bra038109.1-P	Field mustard	nucleus	46.91	42.71
VIT_19s0014g01850.t01	Wine grape	nucleus	35.93	29.18
KRH55161	Soybean	nucleus	29.06	27.73
KRH30071	Soybean	cytosol	21.74	27.62
VIT_03s0097g00680.t01	Wine grape	nucleus	26.09	27.08
KRH26195	Soybean	nucleus	28.38	27.07
VIT_03s0088g00930.t01	Wine grape	nucleus, plastid	24.26	26.97
KRH55165	Soybean	nucleus	18.99	26.69
VIT_03s0088g01090.t01	Wine grape	nucleus	27.0	25.82
KRH22017	Soybean	nucleus	29.75	24.62
Bra024009.1-P	Field mustard	nucleus	9.84	24.57
KRH55090	Soybean	nucleus	19.91	23.39
Bra019499.1-P	Field mustard	nucleus	8.7	23.17
Solyc12g014070.1.1	Tomato	nucleus	28.15	22.99
PGSC0003DMT400054921	Potato	nucleus	27.0	22.74
Solyc10g007140.2.1	Tomato	nucleus	27.0	22.74
PGSC0003DMT400039631	Potato	nucleus	27.69	22.57
Bra040450.1-P	Field mustard	nucleus	10.98	19.83
Bra003830.1-P	Field mustard	nucleus, plastid	13.5	17.4
TraesCS3A01G246900.3	Wheat	nucleus	20.82	17.27
TraesCS3B01G272400.4	Wheat	nucleus	20.82	17.23
TraesCS3D01G244600.1	Wheat	nucleus	20.82	17.23
HORVU3Hr1G061010.4	Barley	nucleus	20.59	17.11
Bra015967.1-P	Field mustard	nucleus	13.5	16.53
Os01t0667700-02	Rice	nucleus	19.68	16.41
Bra027467.1-P	Field mustard	nucleus	15.33	16.34
EES03404	Sorghum	nucleus	19.45	16.31
Bra022580.1-P	Field mustard	cytosol	6.64	16.11
Zm00001d011541_P004	Maize	nucleus	19.45	16.04
KXG22536	Sorghum	nucleus	18.54	15.94
Bra016574.1-P	Field mustard	nucleus	13.04	15.92
Bra024007.1-P	Field mustard	nucleus	16.48	15.42
HORVU1Hr1G087900.1	Barley	cytosol	18.08	15.19
Zm00001d009571_P002	Maize	nucleus	17.62	15.04
Bra006070.1-P	Field mustard	nucleus	16.93	14.95
TraesCS1D01G405800.9	Wheat	cytosol	17.85	14.89
Os05t0564300-01	Rice	nucleus	16.93	14.8
TraesCS1A01G398300.8	Wheat	cytosol	17.85	14.47
TraesCS1B01G426200.9	Wheat	cytosol	18.08	14.42
Bra017205.1-P	Field mustard	nucleus	17.62	14.34
Bra038240.1-P	Field mustard	nucleus	10.76	14.11
Bra023101.1-P	Field mustard	nucleus	17.16	14.07
Bra022466.1-P	Field mustard	nucleus	10.3	13.89
Solyc07g062720.1.1	Tomato	nucleus	24.26	13.68
Bra009015.1-P	Field mustard	plastid	16.25	13.32
PGSC0003DMT400032385	Potato	nucleus	24.49	13.18
Bra039842.1-P	Field mustard	nucleus	17.85	13.07
Bra015221.1-P	Field mustard	nucleus	17.85	13.07
Bra033652.1-P	Field mustard	nucleus	18.31	13.01
Bra022579.1-P	Field mustard	cytosol	3.66	12.12
Bra014043.1-P	Field mustard	nucleus	15.56	11.81
Zm00001d039015_P002	Maize	cytosol	10.53	11.25
Bra028293.1-P	Field mustard	nucleus	5.95	10.88
Bra009800.1-P	Field mustard	nucleus	9.38	10.0
Bra028576.1-P	Field mustard	cytosol	5.72	8.83
Bra036336.1-P	Field mustard	nucleus	6.18	5.37

Protein Annotations

EnsemblPlants:Bra001582.1	EnsemblPlants:Bra001582.1-P	EnsemblPlantsGene:Bra001582	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR22937	PANTHER:PTHR22937:SF48	PFAM:PF13639	PFscan:PS50089
SEG:seg	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI00025409EA	UniProt:M4CBK2	MapMan:35.1

Description

AT3G15070 (E=1e-114) | zinc finger (C3HC4-type RING finger) family protein

Coordinates

chrA03:-:17181501..17183167

Molecular Weight (calculated)

49624.9 Da

IEP (calculated)

6.256

GRAVY (calculated)

-0.820

Length

437 amino acids

Sequence
(BLAST)

001: MEQHSHPDTP HMNPVPTFLQ EPYDNNSMLN GLPQYPPPPP PHHHHHHHHH QRASNLGPTM STPPNLYLPY EPLHAHPLAL GSHESNPHFM GHGYKRKSDE
101: VIIPGNYQYL TEPAPPPETA PLAFPHYATN AYPQPMDQRS VRSRLGAVTM DPPYSQGNYP FPPPAPIWYD QHVNDNNTSD GSSSSSYWLQ PPSIPFMHGN
201: AAPRFHEASS SRNDVPFAYP TPNYFSHHPA PPPPPPTLYP PRMTSASYTV PMTIHDAPYR NVGPVQSTGL RINRQHPRDG FSPAASLRHY GLPPHLRAFP
301: AYEDAFFVEG EFFDDDEVDD HQDMRLDIED MSYEELLDLS DHIGTVKTGL SEETVKDLVK RRTYISTRIN LEEAPSTDLE TDSCTICQET YKNRDKIAML
401: DCKHEYHPAC LEKWLVIKNI CPICKSEALV MDKNKER

Best Arabidopsis Sequence Match ( AT3G15070.2 )
(BLAST)

001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR

Arabidopsis Description

At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.