Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG22536 | Sorghum | nucleus | 86.91 | 87.6 |
| Zm00001d039015_P002 | Maize | cytosol | 66.6 | 83.37 |
| Os05t0564300-01 | Rice | nucleus | 56.25 | 57.6 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 49.8 | 49.04 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 49.8 | 48.66 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 49.22 | 46.75 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 50.0 | 46.72 |
| Zm00001d011541_P004 | Maize | nucleus | 46.88 | 45.28 |
| Zm00001d026446_P001 | Maize | cytosol | 12.3 | 34.24 |
| Zm00001d015453_P001 | Maize | cytosol | 6.05 | 24.03 |
| Zm00001d013776_P001 | Maize | cytosol | 5.86 | 23.26 |
| Zm00001d019616_P001 | Maize | cytosol | 5.86 | 23.26 |
| Zm00001d021225_P002 | Maize | cytosol | 7.81 | 22.86 |
| Zm00001d011636_P001 | Maize | nucleus | 14.84 | 22.49 |
| Zm00001d043784_P002 | Maize | nucleus | 14.84 | 21.97 |
| Solyc12g014070.1.1 | Tomato | nucleus | 22.85 | 21.87 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 22.85 | 21.75 |
| PGSC0003DMT400039631 | Potato | nucleus | 22.46 | 21.46 |
| KRH26195 | Soybean | nucleus | 18.36 | 20.52 |
| Zm00001d048301_P001 | Maize | cytosol | 9.57 | 20.33 |
| KRH55161 | Soybean | nucleus | 17.97 | 20.09 |
| KRH30071 | Soybean | cytosol | 13.48 | 20.06 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 15.23 | 19.85 |
| CDY26006 | Canola | nucleus | 17.77 | 19.7 |
| Bra039659.1-P | Field mustard | nucleus | 17.58 | 19.57 |
| CDY24110 | Canola | nucleus | 17.58 | 19.57 |
| KRH22017 | Soybean | nucleus | 20.12 | 19.51 |
| KRH55165 | Soybean | nucleus | 11.72 | 19.29 |
| Zm00001d027868_P004 | Maize | cytosol | 9.96 | 18.89 |
| PGSC0003DMT400054921 | Potato | nucleus | 19.14 | 18.88 |
| Solyc10g007140.2.1 | Tomato | nucleus | 19.14 | 18.88 |
| CDY25871 | Canola | nucleus | 17.58 | 18.83 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 16.8 | 18.82 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 15.43 | 18.76 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 14.06 | 18.75 |
| Bra038109.1-P | Field mustard | nucleus | 17.58 | 18.75 |
| AT1G53190.1 | Thale cress | nucleus | 17.77 | 18.42 |
| CDY55839 | Canola | nucleus | 17.58 | 18.4 |
| CDY68521 | Canola | nucleus | 15.82 | 18.37 |
| Bra027282.1-P | Field mustard | nucleus | 15.62 | 17.98 |
| CDX97629 | Canola | nucleus | 15.43 | 17.91 |
| CDX82450 | Canola | nucleus | 15.62 | 17.86 |
| CDX75805 | Canola | cytosol | 15.43 | 17.83 |
| AT3G15070.1 | Thale cress | nucleus | 16.8 | 17.7 |
| Bra001582.1-P | Field mustard | nucleus | 15.04 | 17.62 |
| Zm00001d024406_P002 | Maize | nucleus | 12.3 | 17.6 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 9.77 | 17.42 |
| Zm00001d026248_P001 | Maize | nucleus | 12.89 | 17.37 |
| KRH55090 | Soybean | nucleus | 12.5 | 17.2 |
| Zm00001d045517_P001 | Maize | mitochondrion, nucleus | 8.98 | 17.16 |
| Zm00001d006226_P001 | Maize | peroxisome | 10.35 | 16.67 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 12.5 | 16.12 |
| Zm00001d039769_P002 | Maize | cytosol | 17.19 | 15.97 |
| Zm00001d008649_P003 | Maize | cytosol | 16.41 | 15.94 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 9.57 | 15.22 |
| Zm00001d025027_P002 | Maize | nucleus | 20.31 | 14.94 |
| Zm00001d002624_P003 | Maize | cytosol | 9.77 | 14.88 |
| Zm00001d004300_P003 | Maize | nucleus | 19.73 | 14.55 |
| Zm00001d015289_P001 | Maize | nucleus | 15.04 | 13.6 |
| Zm00001d026445_P001 | Maize | nucleus | 17.19 | 13.44 |
| Zm00001d015323_P002 | Maize | cytosol | 2.93 | 13.27 |
| Zm00001d002080_P002 | Maize | nucleus | 17.19 | 13.27 |
| Zm00001d014609_P002 | Maize | nucleus | 14.84 | 12.99 |
| Solyc07g062720.1.1 | Tomato | nucleus | 19.14 | 12.65 |
| PGSC0003DMT400032385 | Potato | nucleus | 18.95 | 11.95 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 11.52 | 9.59 |
Protein Annotations
| EntrezGene:100281720 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1D6FKB1 | ProteinID:AQK92158.1 | ProteinID:AQK92161.1 |
| InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF67 |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000844CAF6 | EnsemblPlantsGene:Zm00001d009571 | EnsemblPlants:Zm00001d009571_P002 | EnsemblPlants:Zm00001d009571_T002 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
C-terminal zinc-finger%3B Putative RING zinc finger domain superfamily protein isoform 1%3B Putative RING zinc finger domain superfamily protein isoform 2
Coordinates
chr8:+:71287101..71293262
Molecular Weight (calculated)
56161.8 Da
IEP (calculated)
5.974
GRAVY (calculated)
-0.319
Length
512 amino acids
Sequence
(BLAST)
(BLAST)
001: MSYRNMLWTH QSVNPEWEQG HVQVQPRSSY YAGTVSDSSN LGMQVAVGVP VNTVNVGICD LWNHERLPVH NSYPHASVTS RFVLPTSMYN PCMPAAAVNI
101: YIPQTQSFGL GNVLPPSLHS QVSTGTIDEN NSSFNFGDSA IGSMKRKTAV VAGNHHILHG FAGSSSSVHV PQNPVYGPWN ASSQSNCLPS SAASNLPEYH
201: NSNGWPFLEE SSANASNSFT SVDACPELVP HGNNLYPACH IIQCNTWVPQ TASHGVPQWG YGNVMVNPPG TVDMPNGNIQ DYQAGHSSIH GPLPHFCQIP
301: LRSMQVPQIQ VPHQQFIGNN VVHGLNPSAA GLPLDPRMLA FPFNDEHTFG HQVHPPLINQ ANNGALRILP YQNATVMDHS RIYEAGHVID EHRDMRLDVD
401: NMTYEACISE LVALQEQIGD VNTGLTESYI QENLRSTFHV PGAASISDQF CELSLENDAC IICQEEYEAR ELIGALECGH KYHEDCIKQW LMVKNVCPIC
501: KTTALSSDRR NG
101: YIPQTQSFGL GNVLPPSLHS QVSTGTIDEN NSSFNFGDSA IGSMKRKTAV VAGNHHILHG FAGSSSSVHV PQNPVYGPWN ASSQSNCLPS SAASNLPEYH
201: NSNGWPFLEE SSANASNSFT SVDACPELVP HGNNLYPACH IIQCNTWVPQ TASHGVPQWG YGNVMVNPPG TVDMPNGNIQ DYQAGHSSIH GPLPHFCQIP
301: LRSMQVPQIQ VPHQQFIGNN VVHGLNPSAA GLPLDPRMLA FPFNDEHTFG HQVHPPLINQ ANNGALRILP YQNATVMDHS RIYEAGHVID EHRDMRLDVD
401: NMTYEACISE LVALQEQIGD VNTGLTESYI QENLRSTFHV PGAASISDQF CELSLENDAC IICQEEYEAR ELIGALECGH KYHEDCIKQW LMVKNVCPIC
501: KTTALSSDRR NG
001: MQGERASLGY LSEALNFEHG SSSSNGVIDH WENIHSLGDN DLQDYMIANS ESNTSLANSV YHEQQGLRRF SLGEASSSGT KDEASSHNEQ RMETRCFDGR
101: GNEIIDLDPV FAQPSGTNQP VQNVNLNAEY IEIHEDINPY RGRSGFIEAN GPGTRVSQPG RSFEENGVGT GSSVEGRRAS CKRKALEGSI SQSSSGGYHD
201: FQRGESSSWT PGSTVFRPGN GLNISGSLDN GPRGMVSGTV PNFPVSAPNF PVSAIAESSS RNICVRSNPS DHQETVNPST FAAGTVVRRP VPPSQLNLSR
301: HLPADQHSLD LRPGQSFVVS RNPNSTPVSI PPGSRTMLPP FRWTGSSLVG GTSNSTAPVE RNLHLDETRS RSIPGNTLEI PMFAAPEVGN FARSQSSRNV
401: TNGNLNSASS VSRTGSTTSV PPPPPPSSNL AWTSYQNSPH YQRRRTERSE LARRSLLSSL AADATNQRSG DHPTLRSLAP PASSDGLVLQ PGGDNSQMHN
501: RAYSRAGPLF DRQGDSVVGI PHPLRALAAA SRGRSRLMVS QMQNVLDVMR RDANNNNLRL EDVMLLNHSV LFDGATGHDR YRDMRLDVDN MSYEELLALE
601: ERIGDVCTGV NEETISNRLK QRKYKSNTKS PQDAEPCCVC QEEYTEGEDM GTLECGHEFH SQCIKEWLKQ KNLCPICKTT GLNTAKKRRI A
101: GNEIIDLDPV FAQPSGTNQP VQNVNLNAEY IEIHEDINPY RGRSGFIEAN GPGTRVSQPG RSFEENGVGT GSSVEGRRAS CKRKALEGSI SQSSSGGYHD
201: FQRGESSSWT PGSTVFRPGN GLNISGSLDN GPRGMVSGTV PNFPVSAPNF PVSAIAESSS RNICVRSNPS DHQETVNPST FAAGTVVRRP VPPSQLNLSR
301: HLPADQHSLD LRPGQSFVVS RNPNSTPVSI PPGSRTMLPP FRWTGSSLVG GTSNSTAPVE RNLHLDETRS RSIPGNTLEI PMFAAPEVGN FARSQSSRNV
401: TNGNLNSASS VSRTGSTTSV PPPPPPSSNL AWTSYQNSPH YQRRRTERSE LARRSLLSSL AADATNQRSG DHPTLRSLAP PASSDGLVLQ PGGDNSQMHN
501: RAYSRAGPLF DRQGDSVVGI PHPLRALAAA SRGRSRLMVS QMQNVLDVMR RDANNNNLRL EDVMLLNHSV LFDGATGHDR YRDMRLDVDN MSYEELLALE
601: ERIGDVCTGV NEETISNRLK QRKYKSNTKS PQDAEPCCVC QEEYTEGEDM GTLECGHEFH SQCIKEWLKQ KNLCPICKTT GLNTAKKRRI A
Arabidopsis Description
RHG1AProbable E3 ubiquitin-protein ligase RHG1A [Source:UniProtKB/Swiss-Prot;Acc:Q9FMM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.