Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12797 | Sorghum | nucleus | 83.12 | 88.24 |
| Zm00001d026248_P001 | Maize | nucleus | 75.82 | 79.21 |
| Os04t0603200-01 | Rice | nucleus | 56.68 | 68.39 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 58.19 | 61.93 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 56.42 | 60.7 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 56.93 | 60.27 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 56.42 | 60.22 |
| Zm00001d024406_P002 | Maize | nucleus | 43.32 | 48.04 |
| Zm00001d026446_P001 | Maize | cytosol | 15.37 | 33.15 |
| Zm00001d013776_P001 | Maize | cytosol | 10.08 | 31.01 |
| Zm00001d015453_P001 | Maize | cytosol | 10.08 | 31.01 |
| Zm00001d019616_P001 | Maize | cytosol | 9.82 | 30.23 |
| Bra024009.1-P | Field mustard | nucleus | 11.84 | 26.86 |
| CDY13429 | Canola | cytosol | 16.62 | 25.58 |
| CDX97032 | Canola | plastid | 21.16 | 25.07 |
| CDY71882 | Canola | plastid | 21.41 | 24.29 |
| CDX85750 | Canola | nucleus | 23.43 | 24.09 |
| Zm00001d043784_P002 | Maize | nucleus | 19.9 | 22.83 |
| Zm00001d011636_P001 | Maize | nucleus | 18.89 | 22.19 |
| CDY40109 | Canola | nucleus | 10.08 | 21.51 |
| Zm00001d021225_P002 | Maize | cytosol | 9.07 | 20.57 |
| CDX70363 | Canola | nucleus | 24.18 | 19.75 |
| Zm00001d048301_P001 | Maize | cytosol | 11.84 | 19.5 |
| CDX78393 | Canola | nucleus | 24.18 | 19.43 |
| CDX95473 | Canola | nucleus | 22.67 | 19.4 |
| Bra006070.1-P | Field mustard | nucleus | 23.68 | 18.99 |
| CDX97044 | Canola | nucleus | 24.18 | 18.82 |
| CDX69813 | Canola | mitochondrion | 24.18 | 18.01 |
| Bra009015.1-P | Field mustard | plastid | 24.18 | 18.01 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 17.38 | 17.97 |
| AT5G10650.2 | Thale cress | nucleus | 23.43 | 17.71 |
| CDY68658 | Canola | nucleus | 20.91 | 17.7 |
| Solyc08g006460.2.1 | Tomato | nucleus | 23.43 | 17.51 |
| AT5G24870.2 | Thale cress | nucleus | 22.92 | 17.5 |
| PGSC0003DMT400067670 | Potato | nucleus | 22.92 | 17.23 |
| CDX88140 | Canola | nucleus | 20.91 | 17.22 |
| KRH04957 | Soybean | nucleus | 22.92 | 17.11 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 23.68 | 17.09 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 12.34 | 17.07 |
| KRH16134 | Soybean | nucleus | 23.68 | 16.94 |
| Solyc12g096420.1.1 | Tomato | nucleus | 23.17 | 16.7 |
| KRH52597 | Soybean | nucleus | 22.42 | 16.45 |
| Zm00001d045517_P001 | Maize | mitochondrion, nucleus | 11.08 | 16.42 |
| PGSC0003DMT400075959 | Potato | nucleus | 22.42 | 16.33 |
| Zm00001d015289_P001 | Maize | nucleus | 23.17 | 16.25 |
| Zm00001d014609_P002 | Maize | nucleus | 23.93 | 16.24 |
| Bra024007.1-P | Field mustard | nucleus | 18.89 | 16.06 |
| Zm00001d015323_P002 | Maize | cytosol | 4.53 | 15.93 |
| CDY13433 | Canola | nucleus | 18.64 | 15.88 |
| CDY63645 | Canola | nucleus | 18.39 | 15.8 |
| Zm00001d027868_P004 | Maize | cytosol | 10.58 | 15.56 |
| Zm00001d006226_P001 | Maize | peroxisome | 11.59 | 14.47 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 11.59 | 14.29 |
| AT4G31450.2 | Thale cress | nucleus | 17.88 | 14.29 |
| Zm00001d039769_P002 | Maize | cytosol | 19.65 | 14.16 |
| Zm00001d008649_P003 | Maize | cytosol | 18.64 | 14.04 |
| Zm00001d011541_P004 | Maize | nucleus | 18.64 | 13.96 |
| KRH61936 | Soybean | nucleus | 18.89 | 13.46 |
| Bra009800.1-P | Field mustard | nucleus | 13.6 | 13.17 |
| Zm00001d026445_P001 | Maize | nucleus | 21.41 | 12.98 |
| Zm00001d002080_P002 | Maize | nucleus | 21.16 | 12.67 |
| Zm00001d009571_P002 | Maize | nucleus | 16.12 | 12.5 |
| Zm00001d025027_P002 | Maize | nucleus | 21.16 | 12.07 |
| Zm00001d004300_P003 | Maize | nucleus | 19.65 | 11.24 |
| Zm00001d002624_P003 | Maize | cytosol | 9.32 | 11.01 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 12.85 | 8.29 |
| Zm00001d039015_P002 | Maize | cytosol | 8.31 | 8.07 |
Protein Annotations
| EntrezGene:100194314 | Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1D6E0G9 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0008270 | InterPro:IPR001841 | InterPro:IPR013083 | ProteinID:ONM14231.1 | PFAM:PF12678 | PFscan:PS50089 |
| PANTHER:PTHR22937 | PANTHER:PTHR22937:SF46 | SUPFAM:SSF57850 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000843C934 |
| EnsemblPlantsGene:Zm00001d002416 | EnsemblPlants:Zm00001d002416_P002 | EnsemblPlants:Zm00001d002416_T002 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_H2 |
| SEG:seg | : | : | : | : | : |
Description
RING/U-box superfamily protein
Coordinates
chr2:+:12275013..12277870
Molecular Weight (calculated)
43783.7 Da
IEP (calculated)
8.061
GRAVY (calculated)
-0.601
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVPPPLLFL FILLCMFRCC HVIITVSDMD EHMGRRTVGG LLFTKGGSIL LFREDGSRPK AKNCCTRHGC SGQHPADRAK GKEVHRAAAV GSESTPATPR
101: RSQAFRKPNR RPPHEGSASG SIVRDVGGPC SETGSGSRDA PGRDLLARLK ERVNTSRKRS LNRENSPQSP SGLSVCASSP SNSRSVSRPS HRTASRIREA
201: DEGANAGADS VVRRNAARRG SERSDDDLLL VEQVTRNQAP SEGFLSGFMA RYRSDLQGEL SSLDDSMEDP NGYLRFDVGG IEELENYFIF NDRHRGMRMD
301: IDGMSYEELL ALGERIGTVN TGLSDDALSA CLNRRLYMPT ASGSHEDCER KCSEEYLAGE EVGEMACKHY YHLSCIDHWL RQKNWCPICK SVALKIN
101: RSQAFRKPNR RPPHEGSASG SIVRDVGGPC SETGSGSRDA PGRDLLARLK ERVNTSRKRS LNRENSPQSP SGLSVCASSP SNSRSVSRPS HRTASRIREA
201: DEGANAGADS VVRRNAARRG SERSDDDLLL VEQVTRNQAP SEGFLSGFMA RYRSDLQGEL SSLDDSMEDP NGYLRFDVGG IEELENYFIF NDRHRGMRMD
301: IDGMSYEELL ALGERIGTVN TGLSDDALSA CLNRRLYMPT ASGSHEDCER KCSEEYLAGE EVGEMACKHY YHLSCIDHWL RQKNWCPICK SVALKIN
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.