Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH16134 | Soybean | nucleus | 88.91 | 85.23 |
| KRH52597 | Soybean | nucleus | 66.54 | 65.43 |
| Zm00001d015453_P001 | Maize | cytosol | 14.85 | 61.24 |
| Zm00001d019616_P001 | Maize | cytosol | 14.85 | 61.24 |
| KRH61936 | Soybean | nucleus | 63.72 | 60.86 |
| Zm00001d013776_P001 | Maize | cytosol | 14.66 | 60.47 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 10.15 | 58.7 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 55.64 | 53.82 |
| KRH05664 | Soybean | nucleus | 11.28 | 49.59 |
| CDX97032 | Canola | plastid | 30.26 | 48.06 |
| CDX85750 | Canola | nucleus | 34.77 | 47.93 |
| CDY71882 | Canola | plastid | 31.02 | 47.14 |
| GSMUA_AchrUn_... | Banana | nucleus | 19.92 | 47.11 |
| CDY40109 | Canola | nucleus | 15.6 | 44.62 |
| CDX78393 | Canola | nucleus | 41.35 | 44.53 |
| Bra006070.1-P | Field mustard | nucleus | 41.35 | 44.44 |
| AT5G24870.2 | Thale cress | nucleus | 43.23 | 44.23 |
| CDX95473 | Canola | nucleus | 38.53 | 44.18 |
| PGSC0003DMT400067670 | Potato | nucleus | 43.23 | 43.56 |
| Solyc12g096420.1.1 | Tomato | nucleus | 44.74 | 43.19 |
| CDX97044 | Canola | nucleus | 41.35 | 43.14 |
| Solyc08g006460.2.1 | Tomato | nucleus | 43.05 | 43.13 |
| CDX70363 | Canola | nucleus | 38.53 | 42.18 |
| Bra009015.1-P | Field mustard | plastid | 42.11 | 42.03 |
| PGSC0003DMT400075959 | Potato | nucleus | 43.05 | 42.02 |
| CDY68658 | Canola | nucleus | 37.03 | 42.0 |
| CDX88140 | Canola | nucleus | 37.78 | 41.7 |
| AT5G10650.2 | Thale cress | nucleus | 40.79 | 41.33 |
| CDX69813 | Canola | mitochondrion | 41.17 | 41.09 |
| Bra024009.1-P | Field mustard | nucleus | 12.22 | 37.14 |
| Bra009800.1-P | Field mustard | nucleus | 26.88 | 34.88 |
| CDY13429 | Canola | cytosol | 16.35 | 33.72 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 35.34 | 32.53 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 34.77 | 32.29 |
| Os06t0695600-01 | Rice | nucleus | 34.96 | 32.12 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 33.83 | 31.91 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 34.77 | 31.57 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 34.59 | 31.56 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 30.45 | 31.52 |
| Zm00001d014609_P002 | Maize | nucleus | 34.02 | 30.94 |
| KXG20741 | Sorghum | nucleus | 34.02 | 30.68 |
| Zm00001d015289_P001 | Maize | nucleus | 32.33 | 30.39 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 34.21 | 30.18 |
| EES04530 | Sorghum | nucleus | 28.57 | 29.34 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 31.39 | 28.74 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 19.74 | 28.46 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 19.55 | 27.96 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 19.36 | 27.61 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 19.36 | 27.47 |
| Os02t0150700-01 | Rice | extracellular | 33.08 | 27.46 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 35.34 | 27.05 |
| Zm00001d024406_P002 | Maize | nucleus | 17.86 | 26.54 |
| EES12797 | Sorghum | nucleus | 18.61 | 26.47 |
| OQU80147 | Sorghum | nucleus | 17.48 | 25.98 |
| Os08t0241400-00 | Rice | nucleus | 17.48 | 24.67 |
| KRH53246 | Soybean | nucleus | 8.46 | 24.59 |
| Os04t0603200-01 | Rice | nucleus | 15.04 | 24.32 |
| KRH48568 | Soybean | nucleus | 16.17 | 24.29 |
| KRH41763 | Soybean | nucleus | 17.11 | 24.14 |
| KRH39137 | Soybean | nucleus | 16.73 | 24.12 |
| Zm00001d026248_P001 | Maize | nucleus | 16.73 | 23.42 |
| KRH64669 | Soybean | nucleus | 8.83 | 23.27 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 17.11 | 22.92 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 10.53 | 22.67 |
| KRH29702 | Soybean | nucleus | 10.53 | 22.58 |
| KRH20832 | Soybean | nucleus | 10.15 | 21.86 |
| KRH24699 | Soybean | nucleus | 10.15 | 21.77 |
| Bra024007.1-P | Field mustard | nucleus | 18.98 | 21.63 |
| CDY13433 | Canola | nucleus | 18.8 | 21.46 |
| KRH60461 | Soybean | nucleus | 17.29 | 21.35 |
| CDY63645 | Canola | nucleus | 18.42 | 21.21 |
| KRH17980 | Soybean | nucleus | 7.71 | 20.2 |
| AT4G31450.2 | Thale cress | nucleus | 18.8 | 20.12 |
| KRH61306 | Soybean | nucleus | 24.06 | 19.57 |
| KRH16389 | Soybean | nucleus | 7.33 | 19.02 |
| KRH30071 | Soybean | cytosol | 12.03 | 18.6 |
| KRH52013 | Soybean | nucleus | 24.44 | 18.36 |
| KRH67668 | Soybean | nucleus | 18.42 | 17.79 |
| KRG95955 | Soybean | nucleus | 18.23 | 17.67 |
| KRH61311 | Soybean | nucleus | 24.06 | 17.44 |
| KRH55165 | Soybean | nucleus | 10.15 | 17.36 |
| KRH50319 | Soybean | nucleus | 22.93 | 17.06 |
| KRH26195 | Soybean | nucleus | 14.47 | 16.81 |
| KRH70661 | Soybean | mitochondrion, nucleus | 22.74 | 16.6 |
| KRH55161 | Soybean | nucleus | 14.29 | 16.59 |
| KRH22017 | Soybean | nucleus | 16.35 | 16.48 |
| KRH19845 | Soybean | nucleus | 16.73 | 16.18 |
| KRG90628 | Soybean | nucleus | 10.15 | 16.12 |
| KRH32434 | Soybean | nucleus | 16.17 | 15.96 |
| KRH55090 | Soybean | nucleus | 11.09 | 15.86 |
| KRH04592 | Soybean | nucleus | 9.77 | 15.57 |
| KRH04591 | Soybean | nucleus | 9.77 | 15.43 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 9.96 | 14.93 |
| KRH05663 | Soybean | cytosol | 12.78 | 11.7 |
Protein Annotations
| EntrezGene:100803211 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02010647 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G198300 |
| InterPro:IPR001841 | InterPro:IPR013083 | UniProt:K7MMR0 | ProteinID:KRH04955.1 | ProteinID:KRH04956.1 | EnsemblPlants:KRH04957 |
| ProteinID:KRH04957 | ProteinID:KRH04957.1 | PFAM:PF13639 | PFscan:PS50089 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000233F1DB | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:31402489..31408601
Molecular Weight (calculated)
58105.7 Da
IEP (calculated)
6.992
GRAVY (calculated)
-0.644
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEYSRKRGV DGMVFPRKGM GHVFRDTANT RDRNGQICSR LGCSSRANLP KVAHVRSSEK GKSLRPSFQS SSSSKDAIGS SSRTTSYPAK RLIEPRKTLS
101: SQFEAHSSET SSVQDGPEFS VPIPPTEEIR RGPLVEGEST ESSNAILMEV GSSSAVSNTR SQRAGLRAQE IKSTGAVRRA VSSRYGLRNL KCNSISDVVP
201: AGCSPLDSSL NRRKDTIKKG NCEGGNSSTV RGKNITGSSL EGRNSGSRNG ISISDSRRSR NVPSHRSTSV ASVRTQRSIS GQARGRFCSQ GNENPVASSD
301: SPLNIPLSPH SGDLDAPGFS YHTSMETPLS GSSSYGRPGN SSEQLSGVMP ASPAEDDNTH SLINRDSFRH YNMGGIAEVL LALERIEQDA ELTHEQILLL
401: EANLFLSGLN FYDHHRDMRL DIDNMSYEEL LALEERMGTV STALPEEALA ECLKRSKYQS APLDDADESC NEDKDDIKCC ICQEEYVVGD EVGDLQCEHR
501: FHVVCIQEWM RLKNWCPVCK VSAALSNSFL PH
101: SQFEAHSSET SSVQDGPEFS VPIPPTEEIR RGPLVEGEST ESSNAILMEV GSSSAVSNTR SQRAGLRAQE IKSTGAVRRA VSSRYGLRNL KCNSISDVVP
201: AGCSPLDSSL NRRKDTIKKG NCEGGNSSTV RGKNITGSSL EGRNSGSRNG ISISDSRRSR NVPSHRSTSV ASVRTQRSIS GQARGRFCSQ GNENPVASSD
301: SPLNIPLSPH SGDLDAPGFS YHTSMETPLS GSSSYGRPGN SSEQLSGVMP ASPAEDDNTH SLINRDSFRH YNMGGIAEVL LALERIEQDA ELTHEQILLL
401: EANLFLSGLN FYDHHRDMRL DIDNMSYEEL LALEERMGTV STALPEEALA ECLKRSKYQS APLDDADESC NEDKDDIKCC ICQEEYVVGD EVGDLQCEHR
501: FHVVCIQEWM RLKNWCPVCK VSAALSNSFL PH
001: MDGFKGKRTS RPIMPRKASG LVLHENMKKK DDKSVVPICS RIGCSSRVSS TKGDLIDHKA KATVSSFRSP LSGKETVGSS SRSMSGFGGT KKASKVIGRR
101: QLSSLLDMDS SESSSVNEDS PTSERSLPRG KTKESTISVH SESSVSGEVV TEAGSSSRGT GRSIHQRPDL VSRDARVSNS EQNARASVNK NGLRDLRNKS
201: GSDVLPSNST PTRKSNIFRK KTSDGESSSS SRGNKTEGSV VGGKNISSPQ GNGITMSEPR RNRNLPSVRD NSVVSSSTRR STGYYGRTGR AGAVATLQAP
301: RPPTRADLNP SRSAEASRSP LNSYSRPISS NGRLRSLMMP GSPSEAGLSR SLMNRDTFRR YNMNGVAEVL LALERIEQDE ELTYEQLAVL ETNLFLNGMS
401: SFHDQHRDMR LDIDNMSYEE LLALEEKMGT VSTALSEEAL LKSLKSSIYR PNDESDDICL NKDDDVKCSI CQEEYVDGDE VGTLPCQHKY HVSCAQQWLR
501: MKNWCPICKT SAESQPHPFS
101: QLSSLLDMDS SESSSVNEDS PTSERSLPRG KTKESTISVH SESSVSGEVV TEAGSSSRGT GRSIHQRPDL VSRDARVSNS EQNARASVNK NGLRDLRNKS
201: GSDVLPSNST PTRKSNIFRK KTSDGESSSS SRGNKTEGSV VGGKNISSPQ GNGITMSEPR RNRNLPSVRD NSVVSSSTRR STGYYGRTGR AGAVATLQAP
301: RPPTRADLNP SRSAEASRSP LNSYSRPISS NGRLRSLMMP GSPSEAGLSR SLMNRDTFRR YNMNGVAEVL LALERIEQDE ELTYEQLAVL ETNLFLNGMS
401: SFHDQHRDMR LDIDNMSYEE LLALEEKMGT VSTALSEEAL LKSLKSSIYR PNDESDDICL NKDDDVKCSI CQEEYVDGDE VGTLPCQHKY HVSCAQQWLR
501: MKNWCPICKT SAESQPHPFS
Arabidopsis Description
At5g24870 [Source:UniProtKB/TrEMBL;Acc:Q8L775]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.