Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH52013 | Soybean | nucleus | 59.21 | 48.59 |
| KRH61306 | Soybean | nucleus | 51.64 | 45.87 |
| KRH61311 | Soybean | nucleus | 56.97 | 45.1 |
| CDY69560 | Canola | nucleus | 18.76 | 21.41 |
| KRH50319 | Soybean | nucleus | 25.47 | 20.7 |
| KRH70661 | Soybean | mitochondrion, nucleus | 24.27 | 19.34 |
| CDY36635 | Canola | nucleus | 17.38 | 16.95 |
| KRH04957 | Soybean | nucleus | 11.7 | 12.78 |
| KRH52597 | Soybean | nucleus | 11.36 | 12.2 |
| GSMUA_Achr4P06080_001 | Banana | nucleus | 9.64 | 12.1 |
| KRH16134 | Soybean | nucleus | 11.53 | 12.07 |
| KRH67668 | Soybean | nucleus | 11.36 | 11.98 |
| KRG95955 | Soybean | nucleus | 11.19 | 11.84 |
| KRH32434 | Soybean | nucleus | 10.5 | 11.32 |
| KRH61936 | Soybean | nucleus | 10.5 | 10.95 |
| KRH19845 | Soybean | nucleus | 10.33 | 10.91 |
| KRH48568 | Soybean | nucleus | 6.02 | 9.89 |
| KRH41763 | Soybean | nucleus | 6.37 | 9.81 |
| KRH22017 | Soybean | nucleus | 8.43 | 9.28 |
| KRH39137 | Soybean | nucleus | 5.85 | 9.21 |
| KRH20832 | Soybean | nucleus | 3.79 | 8.91 |
| KRH60461 | Soybean | nucleus | 6.54 | 8.82 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 3.61 | 8.5 |
| KRG90628 | Soybean | nucleus | 4.82 | 8.36 |
| KRH24699 | Soybean | nucleus | 3.44 | 8.06 |
| KRH29702 | Soybean | nucleus | 3.44 | 8.06 |
| KRH26195 | Soybean | nucleus | 6.02 | 7.64 |
| KRH55161 | Soybean | nucleus | 5.85 | 7.42 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 4.48 | 7.32 |
| KRH04592 | Soybean | nucleus | 4.13 | 7.19 |
| KRH04591 | Soybean | nucleus | 4.13 | 7.12 |
| KRH17980 | Soybean | nucleus | 2.07 | 5.91 |
| KRH30071 | Soybean | cytosol | 3.27 | 5.52 |
| KRH53246 | Soybean | nucleus | 1.72 | 5.46 |
| KRH64669 | Soybean | nucleus | 1.89 | 5.45 |
| KRH16389 | Soybean | nucleus | 1.89 | 5.37 |
| KRH05664 | Soybean | nucleus | 0.86 | 4.13 |
| KRH55090 | Soybean | nucleus | 2.58 | 4.03 |
| KRH55165 | Soybean | nucleus | 1.89 | 3.54 |
| Zm00001d015323_P002 | Maize | cytosol | 0.52 | 2.65 |
Protein Annotations
| EntrezGene:106796770 | MapMan:35.1 | UniProt:A0A0R0FTB3 | EMBL:ACUP02010766 | EnsemblPlantsGene:GLYMA_17G240800 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0043161 | GO:GO:0061630 | EnsemblPlants:KRH05663 |
| ProteinID:KRH05663 | ProteinID:KRH05663.1 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF464 | UniParc:UPI0006EE1A9C | SEG:seg |
Description
hypothetical protein
Coordinates
chr17:+:39630556..39633879
Molecular Weight (calculated)
61976.6 Da
IEP (calculated)
7.971
GRAVY (calculated)
-0.518
Length
581 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGQRGTIGS LPETIEFDCG STSSAATVEP HIFWNNMRNP AENQFVLSPS DINPSHMNSI NNEWQNLSGW SIGEPSSSNT QNGVANNEQK RELGLLSSLS
101: SGAIAGPRLE ERRFESNNAF SLDNVNTSPM HIRSSSSHLV PQNLNLNASL ADSGTDNSYH VERPPSLIKS SGPLNEHVAP TVGSGPFLLP SGTANGFLGE
201: ETDGRPGCSL DTRRVSCKRK AVERNVGQSS DGGSSSYSQH TDGSTWNTLP TQAYGGISFN RSAPTDQVNA RLGLSTGDGS SESIPVSNVA RSSGSFHRNF
301: RPRTSPSSQQ ISVPPTAISS GNVIRSSGVS SPSPILQRFH PVDNSFDLRA VPPVDTMVPQ SQPLVIHVPA LPRNAQSFRW SGGSSSTNNH SSNSVMCADR
401: NNLPNEEASS RSMPRNIIEY PMFVPATNLR NVVRNPARTS NNANLSIPGN VGSSSRTGSN PAVNPPPASA WVSRPNPQQY PRRLSEYVRR SLFSPGLEAA
501: GSSSNSYTPF RGPPTSSESR GLSSGVNPFE RQGDSEFGIP YSLQSLVVAG EGSSRLVSEV CIQLFLLLHI IIIVGVTAGK D
101: SGAIAGPRLE ERRFESNNAF SLDNVNTSPM HIRSSSSHLV PQNLNLNASL ADSGTDNSYH VERPPSLIKS SGPLNEHVAP TVGSGPFLLP SGTANGFLGE
201: ETDGRPGCSL DTRRVSCKRK AVERNVGQSS DGGSSSYSQH TDGSTWNTLP TQAYGGISFN RSAPTDQVNA RLGLSTGDGS SESIPVSNVA RSSGSFHRNF
301: RPRTSPSSQQ ISVPPTAISS GNVIRSSGVS SPSPILQRFH PVDNSFDLRA VPPVDTMVPQ SQPLVIHVPA LPRNAQSFRW SGGSSSTNNH SSNSVMCADR
401: NNLPNEEASS RSMPRNIIEY PMFVPATNLR NVVRNPARTS NNANLSIPGN VGSSSRTGSN PAVNPPPASA WVSRPNPQQY PRRLSEYVRR SLFSPGLEAA
501: GSSSNSYTPF RGPPTSSESR GLSSGVNPFE RQGDSEFGIP YSLQSLVVAG EGSSRLVSEV CIQLFLLLHI IIIVGVTAGK D
001: MQGERASLGY LSEALNFEHG SSSSNGVIDH WENIHSLGDN DLQDYMIANS ESNTSLANSV YHEQQGLRRF SLGEASSSGT KDEASSHNEQ RMETRCFDGR
101: GNEIIDLDPV FAQPSGTNQP VQNVNLNAEY IEIHEDINPY RGRSGFIEAN GPGTRVSQPG RSFEENGVGT GSSVEGRRAS CKRKALEGSI SQSSSGGYHD
201: FQRGESSSWT PGSTVFRPGN GLNISGSLDN GPRGMVSGTV PNFPVSAPNF PVSAIAESSS RNICVRSNPS DHQETVNPST FAAGTVVRRP VPPSQLNLSR
301: HLPADQHSLD LRPGQSFVVS RNPNSTPVSI PPGSRTMLPP FRWTGSSLVG GTSNSTAPVE RNLHLDETRS RSIPGNTLEI PMFAAPEVGN FARSQSSRNV
401: TNGNLNSASS VSRTGSTTSV PPPPPPSSNL AWTSYQNSPH YQRRRTERSE LARRSLLSSL AADATNQRSG DHPTLRSLAP PASSDGLVLQ PGGDNSQMHN
501: RAYSRAGPLF DRQGDSVVGI PHPLRALAAA SRGRSRLMVS QMQNVLDVMR RDANNNNLRL EDVMLLNHSV LFDGATGHDR YRDMRLDVDN MSYEELLALE
601: ERIGDVCTGV NEETISNRLK QRKYKSNTKS PQDAEPCCVC QEEYTEGEDM GTLECGHEFH SQCIKEWLKQ KNLCPICKTT GLNTAKKRRI A
101: GNEIIDLDPV FAQPSGTNQP VQNVNLNAEY IEIHEDINPY RGRSGFIEAN GPGTRVSQPG RSFEENGVGT GSSVEGRRAS CKRKALEGSI SQSSSGGYHD
201: FQRGESSSWT PGSTVFRPGN GLNISGSLDN GPRGMVSGTV PNFPVSAPNF PVSAIAESSS RNICVRSNPS DHQETVNPST FAAGTVVRRP VPPSQLNLSR
301: HLPADQHSLD LRPGQSFVVS RNPNSTPVSI PPGSRTMLPP FRWTGSSLVG GTSNSTAPVE RNLHLDETRS RSIPGNTLEI PMFAAPEVGN FARSQSSRNV
401: TNGNLNSASS VSRTGSTTSV PPPPPPSSNL AWTSYQNSPH YQRRRTERSE LARRSLLSSL AADATNQRSG DHPTLRSLAP PASSDGLVLQ PGGDNSQMHN
501: RAYSRAGPLF DRQGDSVVGI PHPLRALAAA SRGRSRLMVS QMQNVLDVMR RDANNNNLRL EDVMLLNHSV LFDGATGHDR YRDMRLDVDN MSYEELLALE
601: ERIGDVCTGV NEETISNRLK QRKYKSNTKS PQDAEPCCVC QEEYTEGEDM GTLECGHEFH SQCIKEWLKQ KNLCPICKTT GLNTAKKRRI A
Arabidopsis Description
RHG1AProbable E3 ubiquitin-protein ligase RHG1A [Source:UniProtKB/Swiss-Prot;Acc:Q9FMM4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.