Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 4
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH27487 | Soybean | cytosol, nucleus, plastid | 97.17 | 97.17 |
| VIT_13s0064g01030.t01 | Wine grape | nucleus | 63.56 | 63.56 |
| Bra040450.1-P | Field mustard | nucleus | 54.66 | 55.79 |
| CDY53710 | Canola | nucleus | 54.66 | 55.79 |
| CDX93901 | Canola | nucleus | 53.85 | 55.42 |
| AT3G63530.2 | Thale cress | cytosol | 54.25 | 54.03 |
| KRH29702 | Soybean | nucleus | 51.42 | 51.21 |
| KRH24699 | Soybean | nucleus | 50.61 | 50.4 |
| PGSC0003DMT400017553 | Potato | nucleus | 47.37 | 48.15 |
| Solyc01g087060.2.1 | Tomato | nucleus | 47.37 | 31.62 |
| KRH05664 | Soybean | nucleus | 15.38 | 31.41 |
| KRH53246 | Soybean | nucleus | 20.65 | 27.87 |
| KRH17980 | Soybean | nucleus | 21.46 | 26.11 |
| KRH64669 | Soybean | nucleus | 21.05 | 25.74 |
| KRH16389 | Soybean | nucleus | 20.65 | 24.88 |
| KRG90628 | Soybean | nucleus | 29.15 | 21.49 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 26.72 | 18.59 |
| KRH30071 | Soybean | cytosol | 17.0 | 12.21 |
| KRH48568 | Soybean | nucleus | 17.0 | 11.86 |
| KRH55165 | Soybean | nucleus | 14.57 | 11.58 |
| KRH39137 | Soybean | nucleus | 17.0 | 11.38 |
| KRG95955 | Soybean | nucleus | 24.7 | 11.11 |
| KRH67668 | Soybean | nucleus | 24.29 | 10.89 |
| KRH55090 | Soybean | nucleus | 15.38 | 10.22 |
| KRH04957 | Soybean | nucleus | 21.86 | 10.15 |
| KRH26195 | Soybean | nucleus | 18.62 | 10.04 |
| KRH55161 | Soybean | nucleus | 18.62 | 10.04 |
| KRH19845 | Soybean | nucleus | 22.27 | 10.0 |
| KRH32434 | Soybean | nucleus | 21.46 | 9.83 |
| KRH41763 | Soybean | nucleus | 14.98 | 9.81 |
| KRH04592 | Soybean | nucleus | 12.96 | 9.58 |
| KRH52597 | Soybean | nucleus | 20.65 | 9.43 |
| KRH04591 | Soybean | nucleus | 12.55 | 9.2 |
| KRH16134 | Soybean | nucleus | 20.65 | 9.19 |
| KRH22017 | Soybean | nucleus | 19.43 | 9.09 |
| KRH60461 | Soybean | nucleus | 15.38 | 8.82 |
| KRH61936 | Soybean | nucleus | 19.43 | 8.62 |
| KRH61306 | Soybean | nucleus | 22.27 | 8.41 |
| KRH61311 | Soybean | nucleus | 23.48 | 7.9 |
| KRH52013 | Soybean | nucleus | 22.27 | 7.77 |
| KRH50319 | Soybean | nucleus | 20.65 | 7.13 |
| KRH70661 | Soybean | mitochondrion, nucleus | 20.24 | 6.86 |
| KRH05663 | Soybean | cytosol | 8.91 | 3.79 |
Protein Annotations
| EntrezGene:100792734 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02008314 | InterPro:BB | EnsemblPlantsGene:GLYMA_13G203300 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0040007 | GO:GO:0043161 | GO:GO:0046621 |
| GO:GO:0048437 | GO:GO:0061630 | UniProt:I1M0Y6 | InterPro:IPR001841 | InterPro:IPR013083 | ProteinID:KRH20830.1 |
| ProteinID:KRH20831.1 | EnsemblPlants:KRH20832 | ProteinID:KRH20832 | ProteinID:KRH20832.1 | PFAM:PF13639 | PFscan:PS50089 |
| PANTHER:PTHR14155 | PANTHER:PTHR14155:SF75 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0001D83D56 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr13:-:31727841..31735910
Molecular Weight (calculated)
28071.7 Da
IEP (calculated)
4.851
GRAVY (calculated)
-0.646
Length
247 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDGRQMGVH YVDAGFPYAV NDNFVDFFQG FTHVPVNYAF AGSIPDQESV YWSMNMNPYK FGLSGPGSTS YYSSYEVNGH LPRMEIDRAE WEYPSTITTV
101: EEPATTDSPP RRDGVTSMQT IPEECSPNHH ESNSSSQVIW QDNIYPDDMT YEELLDLGEA VGTQSRGLSQ ELIDMLPTSK YKFGSLFKRK NSGKRCVICQ
201: MTYRRGDQQM KLPCSHVYHG ECITKWLSIN KKCPVCNTEV FGEESTH
101: EEPATTDSPP RRDGVTSMQT IPEECSPNHH ESNSSSQVIW QDNIYPDDMT YEELLDLGEA VGTQSRGLSQ ELIDMLPTSK YKFGSLFKRK NSGKRCVICQ
201: MTYRRGDQQM KLPCSHVYHG ECITKWLSIN KKCPVCNTEV FGEESTH
001: MNGDNRPVED AHYTETGFPY AATGSYMDFY GGAAQGPLNY DHAATMHPQD NLYWTMNTNA YKFGFSGSDN ASFYGSYDMN DHLSRMSIGR TNWDYHPMVN
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
101: VADDPENTVA RSVQIGDTDE HSEAEECIAN EHDPDSPQVS WQDDIDPDTM TYEELVELGE AVGTESRGLS QELIETLPTK KYKFGSIFSR KRAGERCVIC
201: QLKYKIGERQ MNLPCKHVYH SECISKWLSI NKVCPVCNSE VFGEPSIH
Arabidopsis Description
BBBB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VG02]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.