Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH55090 | Soybean | nucleus | 85.21 | 71.24 |
| KRH30071 | Soybean | cytosol | 63.99 | 57.85 |
| KRH05664 | Soybean | nucleus | 15.43 | 39.67 |
| KRH55161 | Soybean | nucleus | 58.2 | 39.52 |
| KRH26195 | Soybean | nucleus | 57.88 | 39.3 |
| KRH22017 | Soybean | nucleus | 45.66 | 26.89 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 31.51 | 24.94 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 31.51 | 23.28 |
| KRH53246 | Soybean | nucleus | 13.5 | 22.95 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 39.55 | 22.86 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 31.51 | 21.44 |
| KRH64669 | Soybean | nucleus | 13.83 | 21.29 |
| KRH17980 | Soybean | nucleus | 12.54 | 19.21 |
| KRH16389 | Soybean | nucleus | 12.54 | 19.02 |
| Bra001582.1-P | Field mustard | nucleus | 26.69 | 18.99 |
| CDX82450 | Canola | nucleus | 27.01 | 18.75 |
| CDX75805 | Canola | cytosol | 26.69 | 18.74 |
| CDX97629 | Canola | nucleus | 26.37 | 18.59 |
| CDY68521 | Canola | nucleus | 26.05 | 18.37 |
| CDY24110 | Canola | nucleus | 26.69 | 18.04 |
| Bra039659.1-P | Field mustard | nucleus | 26.69 | 18.04 |
| Bra027282.1-P | Field mustard | nucleus | 25.72 | 17.98 |
| Solyc12g014070.1.1 | Tomato | nucleus | 30.87 | 17.94 |
| PGSC0003DMT400039631 | Potato | nucleus | 30.55 | 17.72 |
| CDY26006 | Canola | nucleus | 26.05 | 17.53 |
| AT3G15070.1 | Thale cress | nucleus | 27.01 | 17.28 |
| Solyc10g007140.2.1 | Tomato | nucleus | 28.3 | 16.96 |
| AT1G53190.1 | Thale cress | nucleus | 26.69 | 16.8 |
| PGSC0003DMT400054921 | Potato | nucleus | 27.97 | 16.76 |
| KRH24699 | Soybean | nucleus | 13.18 | 16.53 |
| CDY25871 | Canola | nucleus | 25.4 | 16.53 |
| Bra038109.1-P | Field mustard | nucleus | 25.4 | 16.46 |
| CDY55839 | Canola | nucleus | 25.4 | 16.16 |
| KRH29702 | Soybean | nucleus | 12.54 | 15.73 |
| KRH20832 | Soybean | nucleus | 11.58 | 14.57 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 11.58 | 14.57 |
| KRH19845 | Soybean | nucleus | 24.44 | 13.82 |
| KRH32434 | Soybean | nucleus | 23.79 | 13.73 |
| KRG95955 | Soybean | nucleus | 23.15 | 13.11 |
| KRH48568 | Soybean | nucleus | 14.79 | 12.99 |
| KRH67668 | Soybean | nucleus | 22.83 | 12.89 |
| KRH39137 | Soybean | nucleus | 15.11 | 12.74 |
| Os01t0667700-02 | Rice | nucleus | 21.22 | 12.6 |
| KRH41763 | Soybean | nucleus | 15.11 | 12.47 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 20.9 | 12.31 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 20.9 | 12.31 |
| EES03404 | Sorghum | nucleus | 20.58 | 12.28 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 20.58 | 12.17 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 20.58 | 12.14 |
| KXG22536 | Sorghum | nucleus | 19.61 | 12.01 |
| Os05t0564300-01 | Rice | nucleus | 19.29 | 12.0 |
| KRG90628 | Soybean | nucleus | 12.86 | 11.94 |
| Zm00001d009571_P002 | Maize | nucleus | 19.29 | 11.72 |
| KRH04592 | Soybean | nucleus | 12.54 | 11.68 |
| KRH04591 | Soybean | nucleus | 12.54 | 11.57 |
| Zm00001d011541_P004 | Maize | nucleus | 19.61 | 11.51 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 18.33 | 10.96 |
| KRH60461 | Soybean | nucleus | 15.11 | 10.9 |
| Solyc07g062720.1.1 | Tomato | nucleus | 26.69 | 10.71 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 12.22 | 10.7 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 17.68 | 10.5 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 18.01 | 10.22 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 17.68 | 10.2 |
| KRH04957 | Soybean | nucleus | 17.36 | 10.15 |
| KRH52597 | Soybean | nucleus | 16.72 | 9.61 |
| PGSC0003DMT400032385 | Potato | nucleus | 25.08 | 9.61 |
| KRH16134 | Soybean | nucleus | 17.04 | 9.55 |
| KRH61306 | Soybean | nucleus | 18.33 | 8.72 |
| KRH50319 | Soybean | nucleus | 19.94 | 8.67 |
| KRH70661 | Soybean | mitochondrion, nucleus | 18.65 | 7.96 |
| KRH52013 | Soybean | nucleus | 18.01 | 7.91 |
| KRH61311 | Soybean | nucleus | 18.65 | 7.9 |
| KRH61936 | Soybean | nucleus | 14.15 | 7.9 |
| Zm00001d039015_P002 | Maize | cytosol | 9.0 | 6.85 |
| KRH05663 | Soybean | cytosol | 3.54 | 1.89 |
Protein Annotations
| EMBL:ACUP02003917 | EnsemblPlants:KRH55165 | EnsemblPlantsGene:GLYMA_06G234500 | EntrezGene:100500299 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | PFAM:PF13639 |
| PFscan:PS50089 | ProteinID:KRH55165 | ProteinID:KRH55165.1 | ProteinID:KRH55166.1 | SEG:seg | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI0006ED513C | UniProt:A0A0R0JL04 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr6:-:37685561..37689389
Molecular Weight (calculated)
35630.7 Da
IEP (calculated)
8.406
GRAVY (calculated)
-0.882
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MRELVHRDII YHDTNGIRSG HRFPRRYHDT NGSRSGHRFP YRYHDTNGSR SGHRFPRRYH NTNGSRSGHR FPQRYHDTTG SRSGQRFPHH PPQHHSFHHQ
101: VQPAQVIRGH SFNIHPPVTA PSYRLPTNPS RNSSILIHDA FEMGARHPGF APFAGARIHQ SHRGNLHEMI TLIHQNLPPA VFFSDDDASL LVDHHTDMYL
201: DTEDMSYEDL LELGEQIGNA KSGLSEKTIT SQMKTKTYIL PTNATNLEEA ASEEQGTDLC IICQDEYKNK ENIGILRCGH EYHADCLRRW LLEKNVCPMC
301: KSIALTPGGK Q
101: VQPAQVIRGH SFNIHPPVTA PSYRLPTNPS RNSSILIHDA FEMGARHPGF APFAGARIHQ SHRGNLHEMI TLIHQNLPPA VFFSDDDASL LVDHHTDMYL
201: DTEDMSYEDL LELGEQIGNA KSGLSEKTIT SQMKTKTYIL PTNATNLEEA ASEEQGTDLC IICQDEYKNK ENIGILRCGH EYHADCLRRW LLEKNVCPMC
301: KSIALTPGGK Q
001: MGQRNRNVDL EMEQQQSQAS LQAEPCILLG SFPQQPDNNN MPAMVAHVPN LEPHSLQDPT YDNSAMFYGL PQYHHHPHQR VPTNFYVPYV AFQAPPGQLP
101: SSSSHGVVGV SPDHEYERNA HFMDHTRGTY KRKNAEGIPG QPQYLSTLAA PFNTPETIAP FGGARNRPGA VTVNTVLPSH APNNFIQGNY AGHHPFPPPG
201: SMWYDQHHGR SDGSPSFWPT PYMHGSNIFA GSIESSSRNP TSFMYPSQLN PRDHYYSHHH HPAPPPVQGM RGQNATLYPH TASSASYRVP PGSFTPQNTM
301: NSGPLGSEMG SSHMGPVQPT GFRIYQHHQR DDSVPVATLR QHRGGVPRLR VMPDDEVALL EFGDFLGGSG NNHIDHHRDM RLDIEEMSYE ELLALSERIG
401: TVNTGLPEED VKNHLKTRTC SGINFEKESS SPRTKDLETE PCTICQESFK NEEKIATLDC GHEYHAECLE KWLIVKNVCP ICKSEALVME KRKV
101: SSSSHGVVGV SPDHEYERNA HFMDHTRGTY KRKNAEGIPG QPQYLSTLAA PFNTPETIAP FGGARNRPGA VTVNTVLPSH APNNFIQGNY AGHHPFPPPG
201: SMWYDQHHGR SDGSPSFWPT PYMHGSNIFA GSIESSSRNP TSFMYPSQLN PRDHYYSHHH HPAPPPVQGM RGQNATLYPH TASSASYRVP PGSFTPQNTM
301: NSGPLGSEMG SSHMGPVQPT GFRIYQHHQR DDSVPVATLR QHRGGVPRLR VMPDDEVALL EFGDFLGGSG NNHIDHHRDM RLDIEEMSYE ELLALSERIG
401: TVNTGLPEED VKNHLKTRTC SGINFEKESS SPRTKDLETE PCTICQESFK NEEKIATLDC GHEYHAECLE KWLIVKNVCP ICKSEALVME KRKV
Arabidopsis Description
At1g53190 [Source:UniProtKB/TrEMBL;Acc:Q5EAI9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.