Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038109.1-P | Field mustard | nucleus | 99.16 | 98.75 |
| CDY55839 | Canola | nucleus | 96.65 | 94.48 |
| CDY26006 | Canola | nucleus | 78.66 | 81.39 |
| CDY24110 | Canola | nucleus | 75.52 | 78.48 |
| AT1G53190.1 | Thale cress | nucleus | 78.45 | 75.91 |
| CDX75805 | Canola | cytosol | 43.31 | 46.73 |
| CDX82450 | Canola | nucleus | 43.31 | 46.21 |
| CDX97629 | Canola | nucleus | 42.05 | 45.58 |
| CDY68521 | Canola | nucleus | 41.21 | 44.67 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 38.28 | 34.01 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 24.06 | 29.26 |
| KRH30071 | Soybean | cytosol | 20.92 | 29.07 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 25.1 | 28.5 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 27.2 | 28.45 |
| KRH55161 | Soybean | nucleus | 27.2 | 28.38 |
| KRH22017 | Soybean | nucleus | 30.75 | 27.84 |
| KRH26195 | Soybean | nucleus | 26.36 | 27.51 |
| CDY13429 | Canola | cytosol | 14.64 | 27.13 |
| Solyc12g014070.1.1 | Tomato | nucleus | 30.13 | 26.92 |
| Solyc10g007140.2.1 | Tomato | nucleus | 28.87 | 26.59 |
| PGSC0003DMT400054921 | Potato | nucleus | 28.87 | 26.59 |
| PGSC0003DMT400039631 | Potato | nucleus | 29.71 | 26.49 |
| KRH55165 | Soybean | nucleus | 16.53 | 25.4 |
| KRH55090 | Soybean | nucleus | 18.83 | 24.19 |
| CDY53710 | Canola | nucleus | 10.46 | 20.66 |
| CDX77848 | Canola | nucleus | 9.0 | 20.28 |
| CDY32973 | Canola | nucleus | 17.36 | 20.24 |
| CDY67192 | Canola | nucleus | 9.0 | 20.19 |
| CDX93901 | Canola | nucleus | 10.04 | 20.0 |
| CDY43590 | Canola | nucleus | 17.36 | 19.71 |
| CDX97032 | Canola | plastid | 13.81 | 19.7 |
| Os01t0667700-02 | Rice | nucleus | 21.34 | 19.47 |
| CDY71882 | Canola | plastid | 14.02 | 19.14 |
| CDY63645 | Canola | nucleus | 18.41 | 19.05 |
| Os05t0564300-01 | Rice | nucleus | 19.46 | 18.6 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 20.08 | 18.46 |
| CDY13433 | Canola | nucleus | 17.99 | 18.45 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 20.29 | 18.37 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 20.29 | 18.37 |
| CDX79718 | Canola | nucleus | 20.29 | 18.27 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 20.08 | 18.22 |
| CDX91624 | Canola | nucleus | 8.37 | 18.18 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 19.87 | 18.06 |
| CDY27083 | Canola | nucleus | 8.16 | 17.81 |
| CDY55435 | Canola | nucleus | 19.67 | 17.8 |
| KXG22536 | Sorghum | nucleus | 18.83 | 17.72 |
| Zm00001d009571_P002 | Maize | nucleus | 18.83 | 17.58 |
| CDY68424 | Canola | nucleus | 19.67 | 17.5 |
| EES03404 | Sorghum | nucleus | 19.04 | 17.47 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 19.67 | 17.44 |
| Zm00001d011541_P004 | Maize | nucleus | 19.25 | 17.36 |
| CDY46757 | Canola | nucleus | 19.25 | 17.26 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 18.83 | 17.18 |
| CDY60141 | Canola | plastid | 12.76 | 17.09 |
| CDY11092 | Canola | cytosol, plastid | 12.34 | 16.95 |
| CDY00512 | Canola | nucleus | 9.62 | 16.85 |
| CDY31919 | Canola | nucleus | 9.62 | 16.85 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 19.25 | 16.79 |
| CDY17114 | Canola | nucleus | 18.62 | 16.76 |
| CDX73013 | Canola | plastid | 12.34 | 16.62 |
| CDX91625 | Canola | cytosol | 7.95 | 16.59 |
| Solyc07g062720.1.1 | Tomato | nucleus | 26.78 | 16.52 |
| PGSC0003DMT400032385 | Potato | nucleus | 27.82 | 16.38 |
| CDX85750 | Canola | nucleus | 13.18 | 16.32 |
| CDX68213 | Canola | nucleus, plastid | 11.72 | 16.05 |
| CDY27082 | Canola | cytosol | 7.95 | 15.97 |
| CDX83878 | Canola | nucleus | 11.92 | 15.97 |
| CDY68658 | Canola | nucleus | 15.48 | 15.78 |
| CDY22376 | Canola | nucleus | 20.08 | 15.61 |
| CDX96741 | Canola | nucleus | 11.72 | 15.38 |
| CDX88140 | Canola | nucleus | 15.48 | 15.35 |
| CDX95473 | Canola | nucleus | 14.85 | 15.3 |
| CDY17061 | Canola | nucleus | 19.25 | 15.18 |
| CDY43220 | Canola | nucleus | 19.25 | 15.11 |
| CDX71531 | Canola | nucleus | 20.08 | 15.07 |
| CDY40109 | Canola | nucleus | 5.86 | 15.05 |
| CDX70363 | Canola | nucleus | 15.27 | 15.02 |
| CDY24595 | Canola | nucleus | 9.83 | 14.92 |
| CDX97044 | Canola | nucleus | 15.9 | 14.9 |
| CDX78393 | Canola | nucleus | 15.27 | 14.78 |
| CDX69813 | Canola | mitochondrion | 16.11 | 14.45 |
| Zm00001d039015_P002 | Maize | cytosol | 12.34 | 14.43 |
| CDY62314 | Canola | nucleus | 17.78 | 14.36 |
| CDY37230 | Canola | nucleus | 17.57 | 14.26 |
| CDY33429 | Canola | nucleus | 9.83 | 14.24 |
| CDY25357 | Canola | nucleus | 9.41 | 14.06 |
| CDY42218 | Canola | nucleus | 9.62 | 13.77 |
| CDY47948 | Canola | nucleus | 8.16 | 7.75 |
| CDY69560 | Canola | nucleus | 7.74 | 7.27 |
| CDY36635 | Canola | nucleus | 7.74 | 6.21 |
Protein Annotations
| EnsemblPlants:CDY25871 | EnsemblPlantsGene:GSBRNA2T00033318001 | Gene3D:3.30.40.10 | GO:A0A078GKE3 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY25871 | ProteinID:CDY25871.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE0A52 |
| UniProt:A0A078GKE3 | MapMan:35.1 | : | : | : | : |
Description
BnaA05g14620DBnaA05g14620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GKE3]
Coordinates
chrLK032181:-:385617..389592
Molecular Weight (calculated)
53052.2 Da
IEP (calculated)
6.569
GRAVY (calculated)
-0.739
Length
478 amino acids
Sequence
(BLAST)
(BLAST)
001: MGQRNRTVDL EMEQQHQSQS SLQPGPCILL SSFPQQQQQQ PDNNNNNLPA MAASFPNLEA RSLQDPTSYD MFYGLPQYHH HHQLHQPAPP PNYYVPYMAF
101: QGPSSSSQGV VGVSSDQFMD HTRGAYKRKN AEGIPVMNHQ SLSTLAAPFN NTPETIAPFG GPRSRPMNHV LPPPPPPHAP NSFIQGSYPG HHPFPPPGSI
201: WYDQHHGRPD GSPSFWPHPP YMHAGSIEFS SRNPTAFMYP PRDHYYPHPP PPPPPPHVQG VRGPSATLYP PMASSPSYGF PPGNFAPPQN TINRGGPSGS
301: EMGQVQPTGF RIYQRDDSVP LAALRQHRGG VPRFRMMPDD EVAILEFGDF LGGGSGNNHI DHHRDMRLDI EEMSYEELLA LSERIGTVNT GLPEEDVKNH
401: LKTRTCSVVN LAAESPQTKD RETEPCTICQ ESFKNEEKIA TLDCGHEYHA GCLEKWLVVK NVCPICKAEA LVMEKTTV
101: QGPSSSSQGV VGVSSDQFMD HTRGAYKRKN AEGIPVMNHQ SLSTLAAPFN NTPETIAPFG GPRSRPMNHV LPPPPPPHAP NSFIQGSYPG HHPFPPPGSI
201: WYDQHHGRPD GSPSFWPHPP YMHAGSIEFS SRNPTAFMYP PRDHYYPHPP PPPPPPHVQG VRGPSATLYP PMASSPSYGF PPGNFAPPQN TINRGGPSGS
301: EMGQVQPTGF RIYQRDDSVP LAALRQHRGG VPRFRMMPDD EVAILEFGDF LGGGSGNNHI DHHRDMRLDI EEMSYEELLA LSERIGTVNT GLPEEDVKNH
401: LKTRTCSVVN LAAESPQTKD RETEPCTICQ ESFKNEEKIA TLDCGHEYHA GCLEKWLVVK NVCPICKAEA LVMEKTTV
001: MGQRNRNVDL EMEQQQSQAS LQAEPCILLG SFPQQPDNNN MPAMVAHVPN LEPHSLQDPT YDNSAMFYGL PQYHHHPHQR VPTNFYVPYV AFQAPPGQLP
101: SSSSHGVVGV SPDHEYERNA HFMDHTRGTY KRKNAEGIPG QPQYLSTLAA PFNTPETIAP FGGARNRPGA VTVNTVLPSH APNNFIQGNY AGHHPFPPPG
201: SMWYDQHHGR SDGSPSFWPT PYMHGSNIFA GSIESSSRNP TSFMYPSQLN PRDHYYSHHH HPAPPPVQGM RGQNATLYPH TASSASYRVP PGSFTPQNTM
301: NSGPLGSEMG SSHMGPVQPT GFRIYQHHQR DDSVPVATLR QHRGGVPRLR VMPDDEVALL EFGDFLGGSG NNHIDHHRDM RLDIEEMSYE ELLALSERIG
401: TVNTGLPEED VKNHLKTRTC SGINFEKESS SPRTKDLETE PCTICQESFK NEEKIATLDC GHEYHAECLE KWLIVKNVCP ICKSEALVME KRKV
101: SSSSHGVVGV SPDHEYERNA HFMDHTRGTY KRKNAEGIPG QPQYLSTLAA PFNTPETIAP FGGARNRPGA VTVNTVLPSH APNNFIQGNY AGHHPFPPPG
201: SMWYDQHHGR SDGSPSFWPT PYMHGSNIFA GSIESSSRNP TSFMYPSQLN PRDHYYSHHH HPAPPPVQGM RGQNATLYPH TASSASYRVP PGSFTPQNTM
301: NSGPLGSEMG SSHMGPVQPT GFRIYQHHQR DDSVPVATLR QHRGGVPRLR VMPDDEVALL EFGDFLGGSG NNHIDHHRDM RLDIEEMSYE ELLALSERIG
401: TVNTGLPEED VKNHLKTRTC SGINFEKESS SPRTKDLETE PCTICQESFK NEEKIATLDC GHEYHAECLE KWLIVKNVCP ICKSEALVME KRKV
Arabidopsis Description
At1g53190 [Source:UniProtKB/TrEMBL;Acc:Q5EAI9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.