Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039842.1-P | Field mustard | nucleus | 98.64 | 97.32 |
| CDY62314 | Canola | nucleus | 95.25 | 94.76 |
| PGSC0003DMT400079217 | Potato | cytosol | 10.87 | 64.65 |
| CDY69560 | Canola | nucleus | 52.97 | 61.3 |
| AT2G15530.4 | Thale cress | nucleus | 73.17 | 55.26 |
| CDY36635 | Canola | nucleus | 50.76 | 50.17 |
| Zm00001d026446_P001 | Maize | cytosol | 13.41 | 42.93 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 42.11 | 33.79 |
| CDY43590 | Canola | nucleus | 23.09 | 32.3 |
| CDY32973 | Canola | nucleus | 22.24 | 31.95 |
| KRH50319 | Soybean | nucleus | 38.54 | 31.75 |
| KRH70661 | Soybean | mitochondrion, nucleus | 37.86 | 30.59 |
| CDY17114 | Canola | nucleus | 25.13 | 27.87 |
| CDY22376 | Canola | nucleus | 29.03 | 27.8 |
| CDX71531 | Canola | nucleus | 30.05 | 27.79 |
| Solyc01g107940.2.1 | Tomato | nucleus | 32.09 | 26.73 |
| PGSC0003DMT400066252 | Potato | nucleus | 32.09 | 26.43 |
| Solyc10g050170.1.1 | Tomato | mitochondrion, nucleus | 32.43 | 26.31 |
| Solyc01g107930.2.1 | Tomato | nucleus | 31.92 | 26.18 |
| CDY17061 | Canola | nucleus | 26.83 | 26.07 |
| CDY43220 | Canola | nucleus | 26.15 | 25.29 |
| GSMUA_Achr8P15680_001 | Banana | nucleus | 30.56 | 25.0 |
| GSMUA_Achr9P11290_001 | Banana | nucleus | 29.37 | 24.82 |
| CDY13429 | Canola | cytosol | 10.87 | 24.81 |
| HORVU2Hr1G113970.2 | Barley | cytosol, nucleus | 24.11 | 24.57 |
| EES11547 | Sorghum | nucleus | 26.66 | 23.79 |
| TraesCS2B01G542200.2 | Wheat | nucleus | 26.49 | 23.28 |
| HORVU2Hr1G113930.2 | Barley | nucleus | 25.81 | 23.24 |
| Zm00001d002080_P002 | Maize | nucleus | 26.15 | 23.23 |
| CDX77848 | Canola | nucleus | 8.32 | 23.11 |
| TraesCS2D01G516000.1 | Wheat | nucleus | 25.98 | 22.87 |
| TraesCS2A01G514400.3 | Wheat | nucleus | 25.81 | 22.72 |
| Zm00001d026445_P001 | Maize | nucleus | 25.13 | 22.6 |
| CDY67192 | Canola | nucleus | 8.15 | 22.54 |
| Os04t0648800-01 | Rice | nucleus | 25.47 | 22.49 |
| EES10483 | Sorghum | nucleus | 26.49 | 22.41 |
| CDX97032 | Canola | plastid | 12.73 | 22.39 |
| Zm00001d004300_P003 | Maize | nucleus | 26.32 | 22.33 |
| Zm00001d025027_P002 | Maize | nucleus | 26.15 | 22.13 |
| CDY71882 | Canola | plastid | 13.07 | 22.0 |
| TraesCS2D01G022900.1 | Wheat | nucleus | 26.15 | 21.97 |
| TraesCS2A01G022100.1 | Wheat | nucleus | 25.98 | 21.83 |
| CDY11092 | Canola | cytosol, plastid | 12.73 | 21.55 |
| TraesCS2B01G030700.1 | Wheat | nucleus | 25.64 | 21.54 |
| HORVU2Hr1G003340.5 | Barley | nucleus | 25.81 | 21.53 |
| CDX68213 | Canola | nucleus, plastid | 12.73 | 21.49 |
| CDX88140 | Canola | nucleus | 17.32 | 21.16 |
| CDY68658 | Canola | nucleus | 16.81 | 21.11 |
| Os04t0185500-01 | Rice | nucleus | 25.13 | 20.87 |
| CDX91624 | Canola | nucleus | 7.64 | 20.45 |
| CDX78393 | Canola | nucleus | 16.98 | 20.24 |
| CDX83878 | Canola | nucleus | 12.22 | 20.17 |
| CDY27083 | Canola | nucleus | 7.47 | 20.09 |
| CDX73013 | Canola | plastid | 12.05 | 20.0 |
| CDX70363 | Canola | nucleus | 16.47 | 19.96 |
| CDX85750 | Canola | nucleus | 13.07 | 19.95 |
| CDY60141 | Canola | plastid | 12.05 | 19.89 |
| CDX96741 | Canola | nucleus | 12.22 | 19.78 |
| CDY40109 | Canola | nucleus | 6.11 | 19.35 |
| CDX95473 | Canola | nucleus | 14.94 | 18.97 |
| CDY26006 | Canola | nucleus | 14.43 | 18.4 |
| CDY46757 | Canola | nucleus | 16.64 | 18.39 |
| CDX93901 | Canola | nucleus | 7.47 | 18.33 |
| CDX79718 | Canola | nucleus | 16.47 | 18.27 |
| CDY53710 | Canola | nucleus | 7.47 | 18.18 |
| CDY24110 | Canola | nucleus | 14.09 | 18.04 |
| CDX97044 | Canola | nucleus | 15.62 | 18.04 |
| CDX82450 | Canola | nucleus | 13.58 | 17.86 |
| CDY25871 | Canola | nucleus | 14.26 | 17.57 |
| CDY47948 | Canola | nucleus | 14.94 | 17.5 |
| CDX69813 | Canola | mitochondrion | 15.79 | 17.45 |
| CDY55435 | Canola | nucleus | 15.45 | 17.23 |
| CDY55839 | Canola | nucleus | 14.26 | 17.18 |
| CDY68424 | Canola | nucleus | 15.62 | 17.13 |
| CDY68521 | Canola | nucleus | 12.73 | 17.01 |
| CDX75805 | Canola | cytosol | 12.73 | 16.93 |
| CDX97629 | Canola | nucleus | 12.56 | 16.78 |
| CDX91625 | Canola | cytosol | 6.45 | 16.59 |
| CDY24595 | Canola | nucleus | 8.83 | 16.51 |
| CDY00512 | Canola | nucleus | 7.64 | 16.48 |
| CDY31919 | Canola | nucleus | 7.64 | 16.48 |
| CDY25357 | Canola | nucleus | 8.83 | 16.25 |
| CDY63645 | Canola | nucleus | 12.39 | 15.8 |
| CDY13433 | Canola | nucleus | 12.22 | 15.45 |
| CDY27082 | Canola | cytosol | 6.11 | 15.13 |
| CDY33429 | Canola | nucleus | 8.32 | 14.85 |
| CDY42218 | Canola | nucleus | 8.32 | 14.67 |
Protein Annotations
| EnsemblPlants:CDY37230 | EnsemblPlantsGene:GSBRNA2T00063717001 | Gene3D:3.30.40.10 | GO:A0A078HFQ5 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF101 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY37230 | ProteinID:CDY37230.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EED2FE |
| UniProt:A0A078HFQ5 | MapMan:35.1 | : | : | : | : |
Description
BnaA09g08510DBnaA09g08510D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HFQ5]
Coordinates
chrLK032395:+:262066..264848
Molecular Weight (calculated)
63502.7 Da
IEP (calculated)
6.251
GRAVY (calculated)
-0.598
Length
589 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPMQGQQST GGGSSTDLNQ GDNEPVYNAE SSLNTMMNPV DNGPTYESPS SHNWWRLGES SSVSGPSDIK TNHQLQHGGV HAAGYNMRNG PAFLRGSSSN
101: AANMSMDMDS SDDDYGARPS GLVFRHSSYG SSLGSSVQAT GESSSGPAAS SLDGWGSSCK RKAFEAAAAS AAPSPTLPDC SGLSHYGASS SLSLATPSQT
201: SPNRMEHMFG SGGGGRAVAT NAFHSDTSSR TGRRLNLRHP QEYAGFSISH SGGSMQQSLP LNSPQDLVHL PALARNIPQF AWDTSLSSRA STSSSGIGMP
301: AELFGPPRSN PEQQPPMFAP PVHDQSIWSF TRGNPPSTID AQQMSPAWIP PPQSAPPPRT SELSPWSLFP SVESQSTTSH GPAASLPLLP SVSSNEAMPS
401: SSSSSRSHRS RQRRSGLLSE RQSELLHLRH LGRSLAADSD GRNHLISEIR QVLTAMRRGE NLRIEDYMVF DPLIFQSMTE MHDRHREMRL DVDNMSYEEL
501: LALGERIGDV STGLREDVIL KTMKQHKCTS SSAELHQDIE PCCICQEEYA EGDDLGTLEC GHEFHKDCIK QWVMLKNLCP ICKTVALTT
101: AANMSMDMDS SDDDYGARPS GLVFRHSSYG SSLGSSVQAT GESSSGPAAS SLDGWGSSCK RKAFEAAAAS AAPSPTLPDC SGLSHYGASS SLSLATPSQT
201: SPNRMEHMFG SGGGGRAVAT NAFHSDTSSR TGRRLNLRHP QEYAGFSISH SGGSMQQSLP LNSPQDLVHL PALARNIPQF AWDTSLSSRA STSSSGIGMP
301: AELFGPPRSN PEQQPPMFAP PVHDQSIWSF TRGNPPSTID AQQMSPAWIP PPQSAPPPRT SELSPWSLFP SVESQSTTSH GPAASLPLLP SVSSNEAMPS
401: SSSSSRSHRS RQRRSGLLSE RQSELLHLRH LGRSLAADSD GRNHLISEIR QVLTAMRRGE NLRIEDYMVF DPLIFQSMTE MHDRHREMRL DVDNMSYEEL
501: LALGERIGDV STGLREDVIL KTMKQHKCTS SSAELHQDIE PCCICQEEYA EGDDLGTLEC GHEFHKDCIK QWVMLKNLCP ICKTVALTT
001: MNPMQGPRSI GGSSTEVNQV DGESIYCTET SLNTMLNPAD TGFPNNSTPS GRPTYASSSS HAAQDHTWWR FGESSSIPGP SDQVNSIGIK TSHQLPQDGT
101: HHFVGYGSEG RQTGLNGMMV DGGVHAGSHI RNVPSFLRGS SSNPMPQHVD MSMDMDSDNC NAQTSGVVIR HNSYGSSLGS SVQAAGESSS GPASPFGGWG
201: SSCKRKALEG SPSHYFSGET PNRIVQTENS ASHASLSQYG ASSSLSLATP SQSSPNVTNH FGRTEQMFGS GGGRAVAASA FHSTRNTDTL SRAGRRLNPR
301: QPQESVAFSV SHGGTSVRPT GSLQQNLPLN SPFVDPPDVR SSSITSGSNT GENQTNIVHL PALTRNIHQY AWDASFSSRA SNPSGIGMPA ERLGPQWETP
401: RSNQEQPLFA PATDMRQPVH DLWNFARGSP GSSVDSLFVP RAGPSSAIHT PQPNPTWIPP QNAPPHNPSR TSELSPWSLF PSIESPSASH GGPLPLLPAG
501: PSVSSNEVTM PSSSNSRSHR SRHRRSGLLL ERQNELLHLR HIGRSLAADG NGRNQIISEI RQVLHAMRRG ENLRVEDYMV FDPLIYQGMT DMHDRHREMR
601: LDVDNMSYEE LLALGERIGD VSTGLSEEVI LKAMKQHKHT SSSPSSVELH QNIEPCCICQ EEYVEGDNLG TLKCGHEFHK DCIKQWVMIK NLCPICKTEA
701: LKTP
101: HHFVGYGSEG RQTGLNGMMV DGGVHAGSHI RNVPSFLRGS SSNPMPQHVD MSMDMDSDNC NAQTSGVVIR HNSYGSSLGS SVQAAGESSS GPASPFGGWG
201: SSCKRKALEG SPSHYFSGET PNRIVQTENS ASHASLSQYG ASSSLSLATP SQSSPNVTNH FGRTEQMFGS GGGRAVAASA FHSTRNTDTL SRAGRRLNPR
301: QPQESVAFSV SHGGTSVRPT GSLQQNLPLN SPFVDPPDVR SSSITSGSNT GENQTNIVHL PALTRNIHQY AWDASFSSRA SNPSGIGMPA ERLGPQWETP
401: RSNQEQPLFA PATDMRQPVH DLWNFARGSP GSSVDSLFVP RAGPSSAIHT PQPNPTWIPP QNAPPHNPSR TSELSPWSLF PSIESPSASH GGPLPLLPAG
501: PSVSSNEVTM PSSSNSRSHR SRHRRSGLLL ERQNELLHLR HIGRSLAADG NGRNQIISEI RQVLHAMRRG ENLRVEDYMV FDPLIYQGMT DMHDRHREMR
601: LDVDNMSYEE LLALGERIGD VSTGLSEEVI LKAMKQHKHT SSSPSSVELH QNIEPCCICQ EEYVEGDNLG TLKCGHEFHK DCIKQWVMIK NLCPICKTEA
701: LKTP
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.