Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001582.1-P | Field mustard | nucleus | 96.65 | 99.08 |
| CDX75805 | Canola | cytosol | 94.42 | 95.49 |
| CDX97629 | Canola | nucleus | 62.72 | 63.72 |
| CDY68521 | Canola | nucleus | 61.83 | 62.81 |
| AT3G15070.1 | Thale cress | nucleus | 62.95 | 58.02 |
| CDY26006 | Canola | nucleus | 48.66 | 47.19 |
| CDY24110 | Canola | nucleus | 47.54 | 46.3 |
| CDY25871 | Canola | nucleus | 46.21 | 43.31 |
| CDY55839 | Canola | nucleus | 46.21 | 42.33 |
| VIT_19s0014g01850.t01 | Wine grape | nucleus | 35.27 | 29.37 |
| KRH55161 | Soybean | nucleus | 28.57 | 27.95 |
| KRH30071 | Soybean | cytosol | 21.43 | 27.91 |
| VIT_03s0097g00680.t01 | Wine grape | nucleus | 25.67 | 27.32 |
| KRH26195 | Soybean | nucleus | 27.9 | 27.29 |
| VIT_03s0088g00930.t01 | Wine grape | nucleus, plastid | 23.88 | 27.23 |
| KRH55165 | Soybean | nucleus | 18.75 | 27.01 |
| VIT_03s0088g01090.t01 | Wine grape | nucleus | 26.56 | 26.04 |
| KRH22017 | Soybean | nucleus | 29.24 | 24.81 |
| CDY13429 | Canola | cytosol | 14.29 | 24.81 |
| KRH55090 | Soybean | nucleus | 19.64 | 23.66 |
| Solyc12g014070.1.1 | Tomato | nucleus | 27.68 | 23.18 |
| Solyc10g007140.2.1 | Tomato | nucleus | 26.34 | 22.74 |
| PGSC0003DMT400054921 | Potato | nucleus | 26.34 | 22.74 |
| PGSC0003DMT400039631 | Potato | nucleus | 27.01 | 22.57 |
| CDX93901 | Canola | nucleus | 10.71 | 20.0 |
| CDY53710 | Canola | nucleus | 10.71 | 19.83 |
| CDX77848 | Canola | nucleus | 9.38 | 19.81 |
| CDY67192 | Canola | nucleus | 9.38 | 19.72 |
| CDX97032 | Canola | plastid | 14.51 | 19.4 |
| CDY71882 | Canola | plastid | 14.73 | 18.86 |
| CDX85750 | Canola | nucleus | 15.62 | 18.13 |
| TraesCS3A01G246900.3 | Wheat | nucleus | 20.98 | 17.84 |
| CDY11092 | Canola | cytosol, plastid | 13.84 | 17.82 |
| CDY27083 | Canola | nucleus | 8.71 | 17.81 |
| TraesCS3D01G244600.1 | Wheat | nucleus | 20.98 | 17.8 |
| TraesCS3B01G272400.4 | Wheat | nucleus | 20.98 | 17.8 |
| CDX91624 | Canola | nucleus | 8.71 | 17.73 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 20.76 | 17.68 |
| CDY31919 | Canola | nucleus | 10.71 | 17.58 |
| CDY00512 | Canola | nucleus | 10.71 | 17.58 |
| CDX68213 | Canola | nucleus, plastid | 13.62 | 17.48 |
| CDY32973 | Canola | nucleus | 15.85 | 17.32 |
| Os01t0667700-02 | Rice | nucleus | 20.09 | 17.18 |
| CDY43590 | Canola | nucleus | 16.07 | 17.1 |
| EES03404 | Sorghum | nucleus | 19.87 | 17.08 |
| CDY60141 | Canola | plastid | 13.39 | 16.81 |
| Zm00001d011541_P004 | Maize | nucleus | 19.87 | 16.79 |
| CDY40109 | Canola | nucleus | 6.92 | 16.67 |
| KXG22536 | Sorghum | nucleus | 18.75 | 16.54 |
| CDX73013 | Canola | plastid | 12.95 | 16.34 |
| CDY63645 | Canola | nucleus | 16.74 | 16.23 |
| CDX91625 | Canola | cytosol | 8.26 | 16.16 |
| Os05t0564300-01 | Rice | nucleus | 17.86 | 16.0 |
| CDX83878 | Canola | nucleus | 12.72 | 15.97 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 18.53 | 15.96 |
| CDY13433 | Canola | nucleus | 16.52 | 15.88 |
| CDX79718 | Canola | nucleus | 18.75 | 15.82 |
| CDX96741 | Canola | nucleus | 12.72 | 15.66 |
| Zm00001d009571_P002 | Maize | nucleus | 17.86 | 15.62 |
| TraesCS1D01G405800.9 | Wheat | cytosol | 18.08 | 15.46 |
| CDY68658 | Canola | nucleus | 16.07 | 15.35 |
| CDY55435 | Canola | nucleus | 18.08 | 15.34 |
| CDY68424 | Canola | nucleus | 18.3 | 15.27 |
| CDX78393 | Canola | nucleus | 16.74 | 15.18 |
| CDY27082 | Canola | cytosol | 8.04 | 15.13 |
| TraesCS1A01G398300.8 | Wheat | cytosol | 18.08 | 15.03 |
| CDX88140 | Canola | nucleus | 16.07 | 14.94 |
| CDY24595 | Canola | nucleus | 10.49 | 14.92 |
| CDX70363 | Canola | nucleus | 16.07 | 14.81 |
| TraesCS1B01G426200.9 | Wheat | cytosol | 18.08 | 14.78 |
| CDY25357 | Canola | nucleus | 10.49 | 14.69 |
| CDX95473 | Canola | nucleus | 15.18 | 14.66 |
| CDY46757 | Canola | nucleus | 17.41 | 14.63 |
| CDY33429 | Canola | nucleus | 10.49 | 14.24 |
| CDY42218 | Canola | nucleus | 10.49 | 14.07 |
| Solyc07g062720.1.1 | Tomato | nucleus | 24.11 | 13.94 |
| CDX97044 | Canola | nucleus | 15.85 | 13.92 |
| CDY37230 | Canola | nucleus | 17.86 | 13.58 |
| CDY17114 | Canola | nucleus | 16.07 | 13.56 |
| CDY62314 | Canola | nucleus | 17.86 | 13.51 |
| CDX69813 | Canola | mitochondrion | 16.07 | 13.51 |
| CDY22376 | Canola | nucleus | 18.53 | 13.5 |
| PGSC0003DMT400032385 | Potato | nucleus | 24.33 | 13.42 |
| CDY17061 | Canola | nucleus | 18.08 | 13.37 |
| CDY43220 | Canola | nucleus | 18.08 | 13.3 |
| CDX71531 | Canola | nucleus | 17.63 | 12.4 |
| Zm00001d039015_P002 | Maize | cytosol | 10.71 | 11.74 |
| CDY69560 | Canola | nucleus | 7.14 | 6.29 |
| CDY47948 | Canola | nucleus | 6.47 | 5.77 |
| CDY36635 | Canola | nucleus | 7.59 | 5.7 |
Protein Annotations
| EnsemblPlants:CDX82450 | EnsemblPlantsGene:GSBRNA2T00137588001 | Gene3D:3.30.40.10 | GO:A0A078D038 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF48 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX82450 | ProteinID:CDX82450.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE8D38 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA03g33710D
Coordinates
chrLK031828:+:1340614..1342892
Molecular Weight (calculated)
50966.4 Da
IEP (calculated)
6.346
GRAVY (calculated)
-0.840
Length
448 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQRHIVTSF DMEQHSHPDT PHMNPVPTFL QEPYDNNSML NGLPQYPPPP PPHHHHHHHH HQRASNLGPT MSTPPNLYLP YEPLHAHPLA PGSHESNPHF
101: MGHGYKRKSD EVIIPGNYQY LTEPAPPPET APLAFPHYAT NAYPQPMDQR SVRSRLGAVT MDPPYSQGNY PFPPPAPIWY DQHVNDNNTS DGSSSSSYWL
201: QPPSIPFMHG NAAPRFHEAS SSRNDVPFAY PTPNYFSHHP APPPPPPTLY PPRMTSTSYT VPMTIHDAPY RNVGPVQSTG LRINRQHPRD GFSPAASLRH
301: YGLPPHLRAF PAYEDAFFVE GEFFDDDEVD DHQDMRLDIE DMSYEELLDL SDHIGTVKTG LSEETVKDLV KRRTYISTRI NLEEAPSTDL ETDSCTICQE
401: TYKNRDKIAT LDCKHEYHPA CLEKWLVIKN VCPICKSEAL VMDKNKER
101: MGHGYKRKSD EVIIPGNYQY LTEPAPPPET APLAFPHYAT NAYPQPMDQR SVRSRLGAVT MDPPYSQGNY PFPPPAPIWY DQHVNDNNTS DGSSSSSYWL
201: QPPSIPFMHG NAAPRFHEAS SSRNDVPFAY PTPNYFSHHP APPPPPPTLY PPRMTSTSYT VPMTIHDAPY RNVGPVQSTG LRINRQHPRD GFSPAASLRH
301: YGLPPHLRAF PAYEDAFFVE GEFFDDDEVD DHQDMRLDIE DMSYEELLDL SDHIGTVKTG LSEETVKDLV KRRTYISTRI NLEEAPSTDL ETDSCTICQE
401: TYKNRDKIAT LDCKHEYHPA CLEKWLVIKN VCPICKSEAL VMDKNKER
001: MRQRNMMTGS DMEQNSQSFV PHPEPRIGTN YLYPDIPPVN TVPHLEAHSL QEPYDNNSMF YGPPQYHHQH ASNLGSGMST APNFYVPYVN YEAPPSFLLS
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
101: HGSNDAVVGV TSTEHERNAH FMDHGFKRKS SEVIPGNSQY PVAPCSFPQL NTSETAPFSF PHFGTYPQPL DQRSVRNRAG AATMDPLLSH GHNNFSQGNY
201: AAHPFPPLGS IWYDQHCNGN RSDGSSSLWS QAPAVPYMHG NIATGSIESG NVCFPRYHET SSSRNPTPSV YQRNHYISHH PVPPPPIVYP HMPSASYAET
301: LHPASYSHMG QVQSTGFRIN QYPGEDFVPA AILRHRELPH FRAMPANENA FWEVGDFYNA VNYVDHHQDM RLDIEDMSYE ELLALSDQIG TVKTGLSSED
401: VKELLKRRTS TRINLEEGPS TDLETDSCTI CQENYKNEDK IATLDCMHKY HAECLKKWLV IKNVCPICKS EALVIEKKKK LRLSSR
Arabidopsis Description
At3g15070/K15M2_22 [Source:UniProtKB/TrEMBL;Acc:Q94F54]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.