Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014043.1-P | Field mustard | nucleus | 93.07 | 97.92 |
| CDY43220 | Canola | nucleus | 96.37 | 95.89 |
| KRH05664 | Soybean | nucleus | 13.04 | 65.29 |
| CDY17114 | Canola | nucleus | 57.1 | 65.16 |
| AT1G45180.3 | Thale cress | nucleus | 67.0 | 62.95 |
| CDY47948 | Canola | nucleus | 47.52 | 57.26 |
| CDY32973 | Canola | nucleus | 37.29 | 55.12 |
| CDY43590 | Canola | nucleus | 38.12 | 54.87 |
| CDX71531 | Canola | nucleus | 52.81 | 50.24 |
| CDY22376 | Canola | nucleus | 50.16 | 49.43 |
| VIT_18s0001g10260.t01 | Wine grape | nucleus | 41.91 | 34.6 |
| Solyc04g078680.2.1 | Tomato | nucleus | 39.11 | 32.83 |
| KRH52013 | Soybean | nucleus | 35.64 | 30.51 |
| PGSC0003DMT400020528 | Potato | nucleus | 34.65 | 30.48 |
| PGSC0003DMT400039849 | Potato | nucleus | 34.82 | 30.45 |
| Solyc12g088740.1.1 | Tomato | nucleus | 34.65 | 30.3 |
| KRH61306 | Soybean | nucleus | 31.52 | 29.2 |
| KRH61311 | Soybean | nucleus | 34.65 | 28.61 |
| CDY62314 | Canola | nucleus | 26.24 | 26.86 |
| CDY37230 | Canola | nucleus | 26.07 | 26.83 |
| CDY13429 | Canola | cytosol | 10.89 | 25.58 |
| CDY67192 | Canola | nucleus | 8.42 | 23.94 |
| CDX77848 | Canola | nucleus | 8.25 | 23.58 |
| CDY40109 | Canola | nucleus | 6.93 | 22.58 |
| CDY60141 | Canola | plastid | 12.87 | 21.85 |
| CDX93901 | Canola | nucleus | 8.58 | 21.67 |
| CDY11092 | Canola | cytosol, plastid | 12.21 | 21.26 |
| CDX97032 | Canola | plastid | 11.72 | 21.19 |
| CDX73013 | Canola | plastid | 12.38 | 21.13 |
| CDY53710 | Canola | nucleus | 8.42 | 21.07 |
| CDX85750 | Canola | nucleus | 13.37 | 20.98 |
| CDX68213 | Canola | nucleus, plastid | 11.88 | 20.63 |
| CDY71882 | Canola | plastid | 11.88 | 20.57 |
| CDX83878 | Canola | nucleus | 12.05 | 20.45 |
| CDX96741 | Canola | nucleus | 12.21 | 20.33 |
| CDX79718 | Canola | nucleus | 17.49 | 19.96 |
| CDY46757 | Canola | nucleus | 17.33 | 19.7 |
| CDY26006 | Canola | nucleus | 14.85 | 19.48 |
| CDY55435 | Canola | nucleus | 16.83 | 19.32 |
| CDY25871 | Canola | nucleus | 15.18 | 19.25 |
| CDY68424 | Canola | nucleus | 16.83 | 18.99 |
| CDY24110 | Canola | nucleus | 14.19 | 18.7 |
| CDY55839 | Canola | nucleus | 15.02 | 18.61 |
| CDX75805 | Canola | cytosol | 13.53 | 18.51 |
| CDY68658 | Canola | nucleus | 14.03 | 18.12 |
| CDX82450 | Canola | nucleus | 13.37 | 18.08 |
| CDX91624 | Canola | nucleus | 6.44 | 17.73 |
| CDX88140 | Canola | nucleus | 14.03 | 17.63 |
| CDY27083 | Canola | nucleus | 6.27 | 17.35 |
| CDX97629 | Canola | nucleus | 12.54 | 17.23 |
| CDX78393 | Canola | nucleus | 14.03 | 17.21 |
| CDY63645 | Canola | nucleus | 13.04 | 17.1 |
| CDY69560 | Canola | nucleus | 14.36 | 17.09 |
| CDX91625 | Canola | cytosol | 6.44 | 17.03 |
| CDX69813 | Canola | mitochondrion | 14.85 | 16.89 |
| CDX70363 | Canola | nucleus | 13.53 | 16.87 |
| CDX95473 | Canola | nucleus | 12.71 | 16.59 |
| CDX97044 | Canola | nucleus | 13.86 | 16.47 |
| CDY31919 | Canola | nucleus | 7.26 | 16.12 |
| CDY68521 | Canola | nucleus | 11.72 | 16.1 |
| CDY13433 | Canola | nucleus | 12.38 | 16.09 |
| CDY00512 | Canola | nucleus | 7.1 | 15.75 |
| CDY27082 | Canola | cytosol | 6.11 | 15.55 |
| CDY42218 | Canola | nucleus | 8.09 | 14.67 |
| CDY24595 | Canola | nucleus | 7.59 | 14.6 |
| CDY33429 | Canola | nucleus | 7.92 | 14.55 |
| CDY25357 | Canola | nucleus | 7.59 | 14.38 |
| CDY36635 | Canola | nucleus | 13.2 | 13.42 |
Protein Annotations
| EnsemblPlants:CDY17061 | EnsemblPlantsGene:GSBRNA2T00095042001 | Gene3D:3.30.40.10 | GO:A0A078FVW2 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF464 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY17061 | ProteinID:CDY17061.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EF0339 |
| UniProt:A0A078FVW2 | MapMan:35.1 | : | : | : | : |
Description
BnaA08g04250DBnaA08g04250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FVW2]
Coordinates
chrLK032069:-:705302..709378
Molecular Weight (calculated)
66728.0 Da
IEP (calculated)
7.878
GRAVY (calculated)
-0.732
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGERASIGS LSETMNFEHG STSSNPVVEQ QILWDNDLQN YMSSAAAADT NTTMSNAVYH EPRDLHRFNL GEGSSSGTKN EAPSSHSEQW MQMGRFEERR
101: NDKLELNPLF MQQPSSTGNR VVRDVNLNAE YIERAEDMNP VTGQGNVAEN SARAGCKRKA IDAGIGQSSS STGAFHRGES SSSWVSGPSF YNHNDLNISL
201: NHAPRGLVPN LSPSPSPAIS SRNFSFGANP TAQQPVFVRQ PVPPSMSAPG HVQPVVDQQL MDMRYRHPFS NVTPLNPNAS APSMPPRNMI PPFHWSGNPV
301: AAAGSSAPVD RNALRPGQSR LRSNMLANPL FVPAPPEPRN LAHGHVASAS VQPPASSPTW APYQNQSPHN QRRLSEHRRR SLISSLLTNQ RAAAAARSMV
401: PPPAPDHHGV HPGGDNNFQT HNQAYSRAVP RQGQTAVGVP HSLRGLASTS RGRSRPSASE IRNVLDHMRR TGNLRVEDFM LLNQTMMLGV ADVHDRHRDM
501: RLDVDDMTYE ELLSLEERIG DVCTGLNEET ISNRLKQRKY NSGTKSTQEI EPCCVCQEEY KEGEEMGVLE CGHDFHSQCI KEWLKRKNLC PICKTTGLNT
601: VEKASK
101: NDKLELNPLF MQQPSSTGNR VVRDVNLNAE YIERAEDMNP VTGQGNVAEN SARAGCKRKA IDAGIGQSSS STGAFHRGES SSSWVSGPSF YNHNDLNISL
201: NHAPRGLVPN LSPSPSPAIS SRNFSFGANP TAQQPVFVRQ PVPPSMSAPG HVQPVVDQQL MDMRYRHPFS NVTPLNPNAS APSMPPRNMI PPFHWSGNPV
301: AAAGSSAPVD RNALRPGQSR LRSNMLANPL FVPAPPEPRN LAHGHVASAS VQPPASSPTW APYQNQSPHN QRRLSEHRRR SLISSLLTNQ RAAAAARSMV
401: PPPAPDHHGV HPGGDNNFQT HNQAYSRAVP RQGQTAVGVP HSLRGLASTS RGRSRPSASE IRNVLDHMRR TGNLRVEDFM LLNQTMMLGV ADVHDRHRDM
501: RLDVDDMTYE ELLSLEERIG DVCTGLNEET ISNRLKQRKY NSGTKSTQEI EPCCVCQEEY KEGEEMGVLE CGHDFHSQCI KEWLKRKNLC PICKTTGLNT
601: VEKASK
001: MQGERASLGS LSKALNFERG STSSNAVVDQ QIRWENLHNY GDNDLQDYMS SAADTNPTFA NSVYHEKRGL QRFNIGEASS SGTKNEGASL TEQWKGIGRF
101: EEQRNDKLEL SPLFVQPSNG SRVVRDVNLN AEYNEHLEDM NPVTVHPGHF EVNGLRSEFL LDNSVRAGSS VDGRRASCKR KALDASGGQS SSTGGFREFQ
201: RGVSSSWISG PTYYSPAMTA NDLNISLDHG RRGLVSSAVP NLSPPTITES SSRNYPVWVN PTYQQETVSN FAPSLNSPGL IPADHQQISM RYGHALGNFA
301: SQNPNAPATH MPPVSRNTFQ WNTSPVAAVI SSSSATPVDR NVIHRNATRQ RSNTLEIPLF VPAPELRNVA HGHISRNASG ARHVASSSSR TSVQPSPSSP
401: ALTPYQNNSL HNQRRLSENF RRSLLSSLVT QQRAARSLAH PASPNEHVLQ SGGDNTSQVH NRASSRAGPR QGQDATGISH SLRGLASTSR GRTRMGASEI
501: RNILEHMRRA GNLRLEDVML LNQSIMLGAA DIHDRYRDMR LDVDNMTYEE LLSLEERIGD VCTGLNEETI SNRLKQQKYK SSTRSSQEVE PCCVCQEEYK
601: EEEEIGRLEC GHDFHSQCIK EWLKQKNLCP ICKTTGLNTA NKPQR
101: EEQRNDKLEL SPLFVQPSNG SRVVRDVNLN AEYNEHLEDM NPVTVHPGHF EVNGLRSEFL LDNSVRAGSS VDGRRASCKR KALDASGGQS SSTGGFREFQ
201: RGVSSSWISG PTYYSPAMTA NDLNISLDHG RRGLVSSAVP NLSPPTITES SSRNYPVWVN PTYQQETVSN FAPSLNSPGL IPADHQQISM RYGHALGNFA
301: SQNPNAPATH MPPVSRNTFQ WNTSPVAAVI SSSSATPVDR NVIHRNATRQ RSNTLEIPLF VPAPELRNVA HGHISRNASG ARHVASSSSR TSVQPSPSSP
401: ALTPYQNNSL HNQRRLSENF RRSLLSSLVT QQRAARSLAH PASPNEHVLQ SGGDNTSQVH NRASSRAGPR QGQDATGISH SLRGLASTSR GRTRMGASEI
501: RNILEHMRRA GNLRLEDVML LNQSIMLGAA DIHDRYRDMR LDVDNMTYEE LLSLEERIGD VCTGLNEETI SNRLKQQKYK SSTRSSQEVE PCCVCQEEYK
601: EEEEIGRLEC GHDFHSQCIK EWLKQKNLCP ICKTTGLNTA NKPQR
Arabidopsis Description
F27F5.26 [Source:UniProtKB/TrEMBL;Acc:Q9MAJ1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.