Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY25357 | Canola | nucleus | 97.14 | 95.62 |
| Bra022466.1-P | Field mustard | nucleus | 96.19 | 93.52 |
| CDY33429 | Canola | nucleus | 87.3 | 83.33 |
| CDY42218 | Canola | nucleus | 86.67 | 81.74 |
| AT3G19910.1 | Thale cress | nucleus | 83.49 | 77.35 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 50.79 | 51.95 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 19.37 | 51.69 |
| GSMUA_Achr4P05140_001 | Banana | nucleus | 47.62 | 50.68 |
| KRG90628 | Soybean | nucleus | 51.75 | 48.66 |
| OQU80744 | Sorghum | mitochondrion | 22.22 | 48.61 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 18.41 | 47.54 |
| GSMUA_Achr3P26700_001 | Banana | nucleus | 43.81 | 47.26 |
| TraesCS7A01G271500.1 | Wheat | cytosol, mitochondrion, nucleus | 42.22 | 46.18 |
| Os09t0535100-01 | Rice | nucleus | 45.08 | 43.69 |
| EER97094 | Sorghum | nucleus | 44.76 | 43.52 |
| EES15239 | Sorghum | nucleus | 43.17 | 43.31 |
| Os08t0548300-01 | Rice | nucleus | 41.9 | 43.28 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 48.57 | 43.1 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 46.35 | 42.94 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 40.0 | 42.14 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 38.1 | 41.81 |
| TraesCS7D01G271800.4 | Wheat | cytosol, mitochondrion, nucleus | 39.68 | 41.67 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 45.71 | 41.62 |
| TraesCS7B01G170500.1 | Wheat | cytosol, mitochondrion, nucleus | 39.37 | 41.47 |
| Zm00001d006226_P001 | Maize | peroxisome | 40.63 | 40.25 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 40.95 | 40.06 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 37.78 | 39.53 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 46.98 | 39.15 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 38.1 | 39.09 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 44.76 | 38.11 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 26.03 | 36.94 |
| CDX93901 | Canola | nucleus | 21.9 | 28.75 |
| CDY53710 | Canola | nucleus | 21.9 | 28.51 |
| CDX77848 | Canola | nucleus | 17.14 | 25.47 |
| CDY67192 | Canola | nucleus | 16.51 | 24.41 |
| CDX91624 | Canola | nucleus | 16.83 | 24.09 |
| CDY27083 | Canola | nucleus | 16.19 | 23.29 |
| CDY31919 | Canola | nucleus | 20.0 | 23.08 |
| CDY00512 | Canola | nucleus | 20.0 | 23.08 |
| CDX91625 | Canola | cytosol | 13.97 | 19.21 |
| CDY27082 | Canola | cytosol | 12.7 | 16.81 |
| CDY13429 | Canola | cytosol | 12.7 | 15.5 |
| CDX97032 | Canola | plastid | 14.92 | 14.03 |
| CDY71882 | Canola | plastid | 14.92 | 13.43 |
| CDX85750 | Canola | nucleus | 15.24 | 12.44 |
| CDY60141 | Canola | plastid | 13.33 | 11.76 |
| CDX73013 | Canola | plastid | 13.02 | 11.55 |
| CDY32973 | Canola | nucleus | 14.92 | 11.46 |
| CDX68213 | Canola | nucleus, plastid | 12.7 | 11.46 |
| CDY40109 | Canola | nucleus | 6.67 | 11.29 |
| CDY43590 | Canola | nucleus | 14.6 | 10.93 |
| CDY17114 | Canola | nucleus | 18.41 | 10.92 |
| CDY11092 | Canola | cytosol, plastid | 12.06 | 10.92 |
| CDX88140 | Canola | nucleus | 16.51 | 10.79 |
| CDY68658 | Canola | nucleus | 15.87 | 10.66 |
| CDX75805 | Canola | cytosol | 14.92 | 10.61 |
| CDX95473 | Canola | nucleus | 15.56 | 10.56 |
| CDX82450 | Canola | nucleus | 14.92 | 10.49 |
| CDX96741 | Canola | nucleus | 12.06 | 10.44 |
| CDX97044 | Canola | nucleus | 16.83 | 10.39 |
| CDX83878 | Canola | nucleus | 11.75 | 10.36 |
| CDY46757 | Canola | nucleus | 17.46 | 10.32 |
| CDY68521 | Canola | nucleus | 14.29 | 10.2 |
| CDX78393 | Canola | nucleus | 15.87 | 10.12 |
| CDX79718 | Canola | nucleus | 16.83 | 9.98 |
| CDX97629 | Canola | nucleus | 13.97 | 9.98 |
| CDY25871 | Canola | nucleus | 14.92 | 9.83 |
| CDY55839 | Canola | nucleus | 15.24 | 9.82 |
| CDY24110 | Canola | nucleus | 14.29 | 9.78 |
| CDY63645 | Canola | nucleus | 14.29 | 9.74 |
| CDY26006 | Canola | nucleus | 14.29 | 9.74 |
| CDX70363 | Canola | nucleus | 14.92 | 9.67 |
| CDY13433 | Canola | nucleus | 14.29 | 9.66 |
| CDY55435 | Canola | nucleus | 15.87 | 9.47 |
| CDX69813 | Canola | mitochondrion | 15.87 | 9.38 |
| CDY68424 | Canola | nucleus | 15.87 | 9.31 |
| CDY62314 | Canola | nucleus | 16.83 | 8.95 |
| CDY37230 | Canola | nucleus | 16.51 | 8.83 |
| CDY22376 | Canola | nucleus | 16.83 | 8.62 |
| CDX71531 | Canola | nucleus | 17.14 | 8.48 |
| CDY17061 | Canola | nucleus | 14.6 | 7.59 |
| CDY43220 | Canola | nucleus | 14.6 | 7.55 |
| CDY47948 | Canola | nucleus | 8.57 | 5.37 |
| CDY69560 | Canola | nucleus | 6.03 | 3.73 |
| CDY36635 | Canola | nucleus | 5.4 | 2.85 |
Protein Annotations
| EnsemblPlants:CDY24595 | EnsemblPlantsGene:GSBRNA2T00026936001 | Gene3D:3.30.40.10 | GO:A0A078GDK6 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF166 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY24595 | ProteinID:CDY24595.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE0710 |
| UniProt:A0A078GDK6 | MapMan:35.1 | : | : | : | : |
Description
BnaC05g32790DBnaC05g32790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GDK6]
Coordinates
chrLK032161:-:249985..252672
Molecular Weight (calculated)
34386.4 Da
IEP (calculated)
3.693
GRAVY (calculated)
-0.770
Length
315 amino acids
Sequence
(BLAST)
(BLAST)
001: MPMENDNDHA ANVVLTAEQA SKVNDTAVRL PENLQTGVVS ESGGGSEKGE EAVETAVEED VDESGSNTVG ELPPRSSSAR VPFTNLSQID ADLALARTLQ
101: EQERAYMMLA MNSEVSDYGS WETGSYVYED DDEYETDDDP QGDAPDVNAH EDEGRIADEE EVGYSDDEAF ARAIQEAEER EMADRLSALT GLANRVEDPE
201: EDDHTSQDAW DEMDPDELSY EELLALGDIV GTESRGLSAD TIASLPSKRY KDGDNQNGTN ESCVICRLDY EDDDDLILLP CKHSYHSGCI NNWLKINKSC
301: PVCSAEVSTS TAGQS
101: EQERAYMMLA MNSEVSDYGS WETGSYVYED DDEYETDDDP QGDAPDVNAH EDEGRIADEE EVGYSDDEAF ARAIQEAEER EMADRLSALT GLANRVEDPE
201: EDDHTSQDAW DEMDPDELSY EELLALGDIV GTESRGLSAD TIASLPSKRY KDGDNQNGTN ESCVICRLDY EDDDDLILLP CKHSYHSGCI NNWLKINKSC
301: PVCSAEVSTS TAGQS
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.