Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27082 | Canola | cytosol | 91.7 | 88.24 |
| AT5G52155.1 | Thale cress | nucleus | 39.74 | 50.0 |
| CDY27083 | Canola | nucleus | 39.74 | 41.55 |
| CDX91624 | Canola | nucleus | 39.74 | 41.36 |
| CDY31919 | Canola | nucleus | 39.74 | 33.33 |
| CDY00512 | Canola | nucleus | 39.3 | 32.97 |
| PGSC0003DMT400037132 | Potato | nucleus | 20.96 | 20.08 |
| Solyc03g026150.2.1 | Tomato | nucleus | 20.52 | 19.83 |
| Os04t0571200-01 | Rice | nucleus | 21.4 | 19.29 |
| CDX93901 | Canola | nucleus | 20.09 | 19.17 |
| EES11283 | Sorghum | nucleus | 20.52 | 19.03 |
| CDY53710 | Canola | nucleus | 20.09 | 19.01 |
| TraesCS2A01G400200.1 | Wheat | nucleus | 19.65 | 17.79 |
| TraesCS2B01G418300.1 | Wheat | cytosol | 19.65 | 17.79 |
| TraesCS2D01G397800.1 | Wheat | cytosol | 19.65 | 17.51 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 19.65 | 16.98 |
| CDY67192 | Canola | nucleus | 14.41 | 15.49 |
| CDX77848 | Canola | nucleus | 13.97 | 15.09 |
| VIT_12s0028g01220.t01 | Wine grape | nucleus | 14.41 | 15.07 |
| CDY42218 | Canola | nucleus | 20.96 | 14.37 |
| CDY25357 | Canola | nucleus | 19.65 | 14.06 |
| Zm00001d002624_P003 | Maize | cytosol | 20.52 | 13.99 |
| CDY24595 | Canola | nucleus | 19.21 | 13.97 |
| CDY33429 | Canola | nucleus | 20.09 | 13.94 |
| CDY13429 | Canola | cytosol | 14.85 | 13.18 |
| GSMUA_Achr4P30500_001 | Banana | nucleus | 18.78 | 12.68 |
| CDY60141 | Canola | plastid | 17.03 | 10.92 |
| CDX73013 | Canola | plastid | 16.59 | 10.7 |
| CDX83878 | Canola | nucleus | 16.59 | 10.64 |
| CDX96741 | Canola | nucleus | 16.59 | 10.44 |
| CDY11092 | Canola | cytosol, plastid | 15.72 | 10.34 |
| CDX68213 | Canola | nucleus, plastid | 15.28 | 10.03 |
| CDX97032 | Canola | plastid | 13.54 | 9.25 |
| CDY43590 | Canola | nucleus | 16.59 | 9.03 |
| CDY32973 | Canola | nucleus | 16.16 | 9.02 |
| CDY71882 | Canola | plastid | 13.54 | 8.86 |
| CDY24110 | Canola | nucleus | 17.47 | 8.7 |
| CDY40109 | Canola | nucleus | 6.99 | 8.6 |
| CDY26006 | Canola | nucleus | 17.03 | 8.44 |
| CDX75805 | Canola | cytosol | 16.16 | 8.35 |
| CDX82450 | Canola | nucleus | 16.16 | 8.26 |
| CDX85750 | Canola | nucleus | 13.54 | 8.03 |
| CDY63645 | Canola | nucleus | 16.16 | 8.01 |
| CDY25871 | Canola | nucleus | 16.59 | 7.95 |
| CDY55839 | Canola | nucleus | 16.59 | 7.77 |
| CDY13433 | Canola | nucleus | 15.72 | 7.73 |
| CDY68521 | Canola | nucleus | 14.85 | 7.71 |
| CDX97629 | Canola | nucleus | 14.41 | 7.48 |
| CDY68658 | Canola | nucleus | 15.28 | 7.46 |
| CDY17114 | Canola | nucleus | 17.03 | 7.34 |
| CDX88140 | Canola | nucleus | 15.28 | 7.26 |
| CDX95473 | Canola | nucleus | 13.54 | 6.68 |
| CDX78393 | Canola | nucleus | 14.41 | 6.68 |
| CDX70363 | Canola | nucleus | 13.97 | 6.58 |
| CDY43220 | Canola | nucleus | 17.47 | 6.57 |
| CDY37230 | Canola | nucleus | 16.59 | 6.45 |
| CDY17061 | Canola | nucleus | 17.03 | 6.44 |
| CDX79718 | Canola | nucleus | 14.85 | 6.4 |
| CDY46757 | Canola | nucleus | 14.85 | 6.38 |
| CDY22376 | Canola | nucleus | 17.03 | 6.34 |
| CDX97044 | Canola | nucleus | 13.97 | 6.27 |
| CDY62314 | Canola | nucleus | 16.16 | 6.25 |
| CDX71531 | Canola | nucleus | 17.03 | 6.12 |
| CDX69813 | Canola | mitochondrion | 13.97 | 6.0 |
| CDY68424 | Canola | nucleus | 13.97 | 5.96 |
| CDY55435 | Canola | nucleus | 13.54 | 5.87 |
| CDY47948 | Canola | nucleus | 3.06 | 1.39 |
| CDY69560 | Canola | nucleus | 2.62 | 1.18 |
| CDY36635 | Canola | nucleus | 2.62 | 1.01 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | GO:A0A078DQN3 | InterPro:BB | EnsemblPlants:CDX91625 | ProteinID:CDX91625 |
| ProteinID:CDX91625.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0040007 |
| GO:GO:0046621 | EnsemblPlantsGene:GSBRNA2T00153063001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13639 | PFscan:PS50089 |
| PANTHER:PTHR14155 | PANTHER:PTHR14155:SF75 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EDE865 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
BnaC02g15350D
Coordinates
chrLK031868:-:1212703..1215121
Molecular Weight (calculated)
26287.2 Da
IEP (calculated)
6.219
GRAVY (calculated)
-0.500
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPNQEEIDE ALAASLLYDD PESTICDTVT LRQIQQQQVM IPPLRVCPPE CPQRFVWPYC PVPYPHGHDT LPFVCLYCPV PYFHVHDCPP SREAFTGHIY
101: GNSSTDMYRR SFSDIGSSSG HGDSENMNVE VVNELIESVG DVNRGLPQSK VSRLPTHKYG ETPKCRWWWE KKKKFVSDDS QCSICLIDYE KGDRITTLTP
201: CNHIYHTDCI SEWLKKSTVC CVCKRKVYC
101: GNSSTDMYRR SFSDIGSSSG HGDSENMNVE VVNELIESVG DVNRGLPQSK VSRLPTHKYG ETPKCRWWWE KKKKFVSDDS QCSICLIDYE KGDRITTLTP
201: CNHIYHTDCI SEWLKKSTVC CVCKRKVYC
001: MFRNRAYNFH GCQACIVNSQ YHGCPCCRQS QYHSPYCSTP FFHLHDVPST SGRFYGYNSY GNSSPDQHTL RRSSSDISLH SFYNEGLNEV EASVGDESGG
101: VPEWKISKFR THKYGKKLKF RWWWQKKKKF VADDSQCSIC LVDYEKGDKI MTLPCNHIYH KDCISYWFKE NRVCCVCKRE VY
101: VPEWKISKFR THKYGKKLKF RWWWQKKKKF VADDSQCSIC LVDYEKGDKI MTLPCNHIYH KDCISYWFKE NRVCCVCKRE VY
Arabidopsis Description
E3 ubiquitin ligase BIG BROTHER-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BFJ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.