Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra022580.1-P | Field mustard | cytosol | 73.53 | 97.22 |
| CDX91625 | Canola | cytosol | 88.24 | 91.7 |
| AT5G52155.1 | Thale cress | nucleus | 35.71 | 46.7 |
| CDY27083 | Canola | nucleus | 36.55 | 39.73 |
| CDX91624 | Canola | nucleus | 36.55 | 39.55 |
| CDY31919 | Canola | nucleus | 36.97 | 32.23 |
| CDY00512 | Canola | nucleus | 36.55 | 31.87 |
| PGSC0003DMT400037132 | Potato | nucleus | 19.75 | 19.67 |
| Solyc03g026150.2.1 | Tomato | nucleus | 19.33 | 19.41 |
| Os04t0571200-01 | Rice | nucleus | 20.17 | 18.9 |
| EES11283 | Sorghum | nucleus | 19.33 | 18.62 |
| CDX93901 | Canola | nucleus | 18.07 | 17.92 |
| CDY53710 | Canola | nucleus | 18.07 | 17.77 |
| TraesCS2A01G400200.1 | Wheat | nucleus | 18.49 | 17.39 |
| TraesCS2B01G418300.1 | Wheat | cytosol | 18.49 | 17.39 |
| TraesCS2D01G397800.1 | Wheat | cytosol | 18.49 | 17.12 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 18.49 | 16.6 |
| CDY67192 | Canola | nucleus | 13.45 | 15.02 |
| CDX77848 | Canola | nucleus | 13.03 | 14.62 |
| VIT_12s0028g01220.t01 | Wine grape | nucleus | 12.61 | 13.7 |
| Zm00001d002624_P003 | Maize | cytosol | 18.91 | 13.39 |
| CDY42218 | Canola | nucleus | 18.49 | 13.17 |
| CDY25357 | Canola | nucleus | 17.23 | 12.81 |
| CDY13429 | Canola | cytosol | 13.87 | 12.79 |
| CDY33429 | Canola | nucleus | 17.65 | 12.73 |
| CDY24595 | Canola | nucleus | 16.81 | 12.7 |
| GSMUA_Achr4P30500_001 | Banana | nucleus | 16.81 | 11.8 |
| CDX83878 | Canola | nucleus | 14.71 | 9.8 |
| CDY60141 | Canola | plastid | 14.29 | 9.52 |
| CDX96741 | Canola | nucleus | 14.29 | 9.34 |
| CDX73013 | Canola | plastid | 13.87 | 9.3 |
| CDY11092 | Canola | cytosol, plastid | 13.45 | 9.2 |
| CDX97032 | Canola | plastid | 12.61 | 8.96 |
| CDX68213 | Canola | nucleus, plastid | 13.03 | 8.88 |
| CDY71882 | Canola | plastid | 12.61 | 8.57 |
| CDY43590 | Canola | nucleus | 15.13 | 8.55 |
| CDY32973 | Canola | nucleus | 14.71 | 8.54 |
| CDY24110 | Canola | nucleus | 15.97 | 8.26 |
| CDY26006 | Canola | nucleus | 15.97 | 8.23 |
| CDX75805 | Canola | cytosol | 15.13 | 8.13 |
| CDY40109 | Canola | nucleus | 6.3 | 8.06 |
| CDX82450 | Canola | nucleus | 15.13 | 8.04 |
| CDY25871 | Canola | nucleus | 15.97 | 7.95 |
| CDY63645 | Canola | nucleus | 15.13 | 7.79 |
| CDX85750 | Canola | nucleus | 12.61 | 7.77 |
| CDY55839 | Canola | nucleus | 15.97 | 7.77 |
| CDY13433 | Canola | nucleus | 14.71 | 7.51 |
| CDY68658 | Canola | nucleus | 14.71 | 7.46 |
| CDX88140 | Canola | nucleus | 14.71 | 7.26 |
| CDY68521 | Canola | nucleus | 13.03 | 7.03 |
| CDX97629 | Canola | nucleus | 12.61 | 6.8 |
| CDY17114 | Canola | nucleus | 15.13 | 6.78 |
| CDX78393 | Canola | nucleus | 13.45 | 6.48 |
| CDX95473 | Canola | nucleus | 12.61 | 6.47 |
| CDX79718 | Canola | nucleus | 14.29 | 6.4 |
| CDY46757 | Canola | nucleus | 14.29 | 6.38 |
| CDX70363 | Canola | nucleus | 13.03 | 6.38 |
| CDY43220 | Canola | nucleus | 15.97 | 6.24 |
| CDY68424 | Canola | nucleus | 13.87 | 6.15 |
| CDY37230 | Canola | nucleus | 15.13 | 6.11 |
| CDY17061 | Canola | nucleus | 15.55 | 6.11 |
| CDX97044 | Canola | nucleus | 13.03 | 6.08 |
| CDY55435 | Canola | nucleus | 13.45 | 6.06 |
| CDY22376 | Canola | nucleus | 15.55 | 6.02 |
| CDY62314 | Canola | nucleus | 14.71 | 5.91 |
| CDX69813 | Canola | mitochondrion | 13.03 | 5.82 |
| CDX71531 | Canola | nucleus | 15.13 | 5.65 |
| CDY47948 | Canola | nucleus | 2.52 | 1.19 |
| CDY69560 | Canola | nucleus | 2.1 | 0.98 |
| CDY36635 | Canola | nucleus | 2.1 | 0.84 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.2 | GO:A0A078GPG8 | UniProt:A0A078GPG8 | InterPro:BB | EnsemblPlants:CDY27082 |
| ProteinID:CDY27082 | ProteinID:CDY27082.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 |
| GO:GO:0040007 | GO:GO:0046621 | EnsemblPlantsGene:GSBRNA2T00036902001 | InterPro:IPR001841 | InterPro:IPR013083 | PFAM:PF13639 |
| PFscan:PS50089 | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF75 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EDB2D7 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
BnaA02g11020DBnaA02g11020D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPG8]
Coordinates
chrLK032199:+:406541..412224
Molecular Weight (calculated)
27165.4 Da
IEP (calculated)
6.269
GRAVY (calculated)
-0.355
Length
238 amino acids
Sequence
(BLAST)
(BLAST)
001: MHPNQVEIDE ALAASLLYDD PESTICDTVT LRQIQQQQVM IPPLRVCPPE CPQRIVCPYC PVPYPHGHDS TLPFVCMYCP IPYFHVHDCP PSREAFTGHF
101: YGNSSTDMYR RSFSDIGSSS GHGDSENMTL EVVNELIESV GDVNRGLPQS KVSRLPTHKY GEIPKCRWWW EKKKKFVSDD SQCSICLIDY EKGDRITTLT
201: PCNHIYHTDC ISEWLKKSAV CVLITSLIDL INFINHKK
101: YGNSSTDMYR RSFSDIGSSS GHGDSENMTL EVVNELIESV GDVNRGLPQS KVSRLPTHKY GEIPKCRWWW EKKKKFVSDD SQCSICLIDY EKGDRITTLT
201: PCNHIYHTDC ISEWLKKSAV CVLITSLIDL INFINHKK
001: MFRNRAYNFH GCQACIVNSQ YHGCPCCRQS QYHSPYCSTP FFHLHDVPST SGRFYGYNSY GNSSPDQHTL RRSSSDISLH SFYNEGLNEV EASVGDESGG
101: VPEWKISKFR THKYGKKLKF RWWWQKKKKF VADDSQCSIC LVDYEKGDKI MTLPCNHIYH KDCISYWFKE NRVCCVCKRE VY
101: VPEWKISKFR THKYGKKLKF RWWWQKKKKF VADDSQCSIC LVDYEKGDKI MTLPCNHIYH KDCISYWFKE NRVCCVCKRE VY
Arabidopsis Description
E3 ubiquitin ligase BIG BROTHER-like protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8BFJ4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.