Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY40109 | Canola | nucleus | 38.08 | 79.03 |
| CDX97032 | Canola | plastid | 58.55 | 67.46 |
| CDY71882 | Canola | plastid | 58.55 | 64.57 |
| CDX97044 | Canola | nucleus | 76.94 | 58.24 |
| CDX78393 | Canola | nucleus | 73.83 | 57.69 |
| CDX95473 | Canola | nucleus | 68.65 | 57.11 |
| CDX70363 | Canola | nucleus | 71.24 | 56.58 |
| AT5G10650.2 | Thale cress | nucleus | 75.13 | 55.24 |
| CDX69813 | Canola | mitochondrion | 75.91 | 54.97 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 12.18 | 51.09 |
| Zm00001d015453_P001 | Maize | cytosol | 16.58 | 49.61 |
| Zm00001d019616_P001 | Maize | cytosol | 16.32 | 48.84 |
| Zm00001d013776_P001 | Maize | cytosol | 16.32 | 48.84 |
| CDX88140 | Canola | nucleus | 54.66 | 43.78 |
| CDY68658 | Canola | nucleus | 52.59 | 43.28 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.32 | 40.0 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 51.55 | 36.18 |
| KRH04957 | Soybean | nucleus | 47.93 | 34.77 |
| PGSC0003DMT400067670 | Potato | nucleus | 45.85 | 33.52 |
| KRH52597 | Soybean | nucleus | 46.89 | 33.46 |
| Solyc08g006460.2.1 | Tomato | nucleus | 45.08 | 32.77 |
| CDY13429 | Canola | cytosol | 21.76 | 32.56 |
| KRH16134 | Soybean | nucleus | 46.63 | 32.43 |
| Solyc12g096420.1.1 | Tomato | nucleus | 46.11 | 32.3 |
| PGSC0003DMT400075959 | Potato | nucleus | 44.82 | 31.74 |
| KRH61936 | Soybean | nucleus | 41.19 | 28.55 |
| EES12797 | Sorghum | nucleus | 25.65 | 26.47 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 34.97 | 26.26 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 38.86 | 25.95 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 39.38 | 25.94 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 25.13 | 25.87 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 38.34 | 25.83 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 24.61 | 25.75 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 24.61 | 25.47 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 24.35 | 25.27 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 36.79 | 25.18 |
| OQU80147 | Sorghum | nucleus | 23.32 | 25.14 |
| Os08t0241400-00 | Rice | nucleus | 24.35 | 24.93 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 37.56 | 24.87 |
| Zm00001d024406_P002 | Maize | nucleus | 22.8 | 24.58 |
| KXG20741 | Sorghum | nucleus | 37.31 | 24.41 |
| Os06t0695600-01 | Rice | nucleus | 36.53 | 24.35 |
| Zm00001d014609_P002 | Maize | nucleus | 36.79 | 24.27 |
| Zm00001d026248_P001 | Maize | nucleus | 23.58 | 23.95 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 37.05 | 23.71 |
| Zm00001d015289_P001 | Maize | nucleus | 34.46 | 23.5 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 24.09 | 23.43 |
| EES04530 | Sorghum | nucleus | 31.35 | 23.36 |
| Os04t0603200-01 | Rice | nucleus | 19.69 | 23.1 |
| CDX73013 | Canola | plastid | 21.24 | 23.1 |
| CDY60141 | Canola | plastid | 20.98 | 22.69 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 33.42 | 22.2 |
| CDY11092 | Canola | cytosol, plastid | 19.43 | 21.55 |
| Os02t0150700-01 | Rice | extracellular | 35.75 | 21.53 |
| CDX68213 | Canola | nucleus, plastid | 19.43 | 21.49 |
| CDY67192 | Canola | nucleus | 11.66 | 21.13 |
| CDX77848 | Canola | nucleus | 11.4 | 20.75 |
| CDY63645 | Canola | nucleus | 24.61 | 20.56 |
| CDX83878 | Canola | nucleus | 18.91 | 20.45 |
| CDY13433 | Canola | nucleus | 24.61 | 20.39 |
| CDX96741 | Canola | nucleus | 19.17 | 20.33 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 36.53 | 20.29 |
| CDX93901 | Canola | nucleus | 11.92 | 19.17 |
| CDY53710 | Canola | nucleus | 11.92 | 19.01 |
| CDY32973 | Canola | nucleus | 19.17 | 18.05 |
| CDY31919 | Canola | nucleus | 12.44 | 17.58 |
| CDY00512 | Canola | nucleus | 12.44 | 17.58 |
| CDY43590 | Canola | nucleus | 19.17 | 17.58 |
| CDY27083 | Canola | nucleus | 9.33 | 16.44 |
| CDX91624 | Canola | nucleus | 9.33 | 16.36 |
| CDX75805 | Canola | cytosol | 18.65 | 16.25 |
| CDY68521 | Canola | nucleus | 17.88 | 15.65 |
| CDX82450 | Canola | nucleus | 18.13 | 15.62 |
| CDY42218 | Canola | nucleus | 13.21 | 15.27 |
| CDY24595 | Canola | nucleus | 12.44 | 15.24 |
| CDY33429 | Canola | nucleus | 12.95 | 15.15 |
| CDX97629 | Canola | nucleus | 17.1 | 14.97 |
| CDY25357 | Canola | nucleus | 12.18 | 14.69 |
| CDY26006 | Canola | nucleus | 17.36 | 14.5 |
| CDY24110 | Canola | nucleus | 17.1 | 14.35 |
| CDX79718 | Canola | nucleus | 19.69 | 14.31 |
| CDY46757 | Canola | nucleus | 19.69 | 14.26 |
| CDY17114 | Canola | nucleus | 19.43 | 14.12 |
| CDX91625 | Canola | cytosol | 8.03 | 13.54 |
| CDY55435 | Canola | nucleus | 18.39 | 13.45 |
| CDY17061 | Canola | nucleus | 20.98 | 13.37 |
| CDY68424 | Canola | nucleus | 18.39 | 13.22 |
| CDY25871 | Canola | nucleus | 16.32 | 13.18 |
| CDY43220 | Canola | nucleus | 20.73 | 13.14 |
| CDY37230 | Canola | nucleus | 19.95 | 13.07 |
| CDY22376 | Canola | nucleus | 20.73 | 13.01 |
| CDY55839 | Canola | nucleus | 16.32 | 12.88 |
| CDY62314 | Canola | nucleus | 19.69 | 12.84 |
| CDY27082 | Canola | cytosol | 7.77 | 12.61 |
| CDX71531 | Canola | nucleus | 20.21 | 12.24 |
| CDY47948 | Canola | nucleus | 8.29 | 6.36 |
| CDY69560 | Canola | nucleus | 5.7 | 4.32 |
| CDY36635 | Canola | nucleus | 5.44 | 3.52 |
Protein Annotations
| EnsemblPlants:CDX85750 | EnsemblPlantsGene:GSBRNA2T00143504001 | Gene3D:3.30.40.10 | GO:A0A078D951 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX85750 | ProteinID:CDX85750.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EDC8D6 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA02g00630D
Coordinates
chrLK031842:+:1533720..1535361
Molecular Weight (calculated)
41741.7 Da
IEP (calculated)
8.676
GRAVY (calculated)
-0.569
Length
386 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGCSGKRSV NRMVLPRKAS GTVLLRENMS KKDEKSVSFC SRIGCSAKVS YTKGTRMVNN TKLGSSSNGK EIVGSSSRTP GGFGYLRKPA TFTTGSPLIG
101: SSVSSSGSEH TVRGGGLSRN GLRCSSVSDA LSTNATRISV TKRKNSDGES SSSSTRASKT SVSGTKGRNQ SSSSGITVSD SRRSRIVPTI RGNSVVSVSG
201: ERSSSSHSRP SSNSGPSPSR SLVSQDSLSR YNINIIAEVL LALERIEHDQ ELTYERLASL ETSLFSSGVF RFYDEHRDMR LDIDNMSYEE LLALGDKMGT
301: VSTALSEEAL SKSLLKSIYQ ETDETGSTSL NKDDDIKCSI CQEEYVDGDE VGTMSCEHMY HVSCVQQWLR MKSWCPICKT SAEEEK
101: SSVSSSGSEH TVRGGGLSRN GLRCSSVSDA LSTNATRISV TKRKNSDGES SSSSTRASKT SVSGTKGRNQ SSSSGITVSD SRRSRIVPTI RGNSVVSVSG
201: ERSSSSHSRP SSNSGPSPSR SLVSQDSLSR YNINIIAEVL LALERIEHDQ ELTYERLASL ETSLFSSGVF RFYDEHRDMR LDIDNMSYEE LLALGDKMGT
301: VSTALSEEAL SKSLLKSIYQ ETDETGSTSL NKDDDIKCSI CQEEYVDGDE VGTMSCEHMY HVSCVQQWLR MKSWCPICKT SAEEEK
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.