Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU80147 | Sorghum | nucleus | 58.89 | 62.01 |
| Zm00001d024406_P002 | Maize | nucleus | 56.23 | 59.22 |
| Os04t0603200-01 | Rice | nucleus | 44.03 | 50.46 |
| Bra024009.1-P | Field mustard | nucleus | 13.0 | 28.0 |
| CDX97032 | Canola | plastid | 23.87 | 26.87 |
| CDY71882 | Canola | plastid | 24.14 | 26.0 |
| CDY13429 | Canola | cytosol | 17.51 | 25.58 |
| CDX85750 | Canola | nucleus | 24.93 | 24.35 |
| CDY40109 | Canola | nucleus | 10.34 | 20.97 |
| CDX95473 | Canola | nucleus | 25.73 | 20.91 |
| CDX78393 | Canola | nucleus | 26.53 | 20.24 |
| Bra006070.1-P | Field mustard | nucleus | 26.53 | 20.2 |
| CDX70363 | Canola | nucleus | 25.99 | 20.16 |
| CDX97044 | Canola | nucleus | 26.79 | 19.8 |
| Os05t0550000-00 | Rice | nucleus | 18.57 | 19.23 |
| AT5G10650.2 | Thale cress | nucleus | 26.53 | 19.05 |
| CDX69813 | Canola | mitochondrion | 26.79 | 18.95 |
| Bra009015.1-P | Field mustard | plastid | 26.79 | 18.95 |
| CDY68658 | Canola | nucleus | 22.55 | 18.12 |
| Os06t0695600-01 | Rice | nucleus | 27.59 | 17.96 |
| Os04t0571200-01 | Rice | nucleus | 11.94 | 17.72 |
| AT5G24870.2 | Thale cress | nucleus | 24.4 | 17.69 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 25.73 | 17.64 |
| CDX88140 | Canola | nucleus | 22.55 | 17.63 |
| Solyc12g096420.1.1 | Tomato | nucleus | 25.73 | 17.6 |
| KRH04957 | Soybean | nucleus | 24.67 | 17.48 |
| KRH16134 | Soybean | nucleus | 25.46 | 17.3 |
| KRH52597 | Soybean | nucleus | 24.67 | 17.19 |
| PGSC0003DMT400075959 | Potato | nucleus | 24.67 | 17.06 |
| Solyc08g006460.2.1 | Tomato | nucleus | 23.87 | 16.95 |
| PGSC0003DMT400067670 | Potato | nucleus | 23.61 | 16.86 |
| Os03t0173900-01 | Rice | nucleus | 11.14 | 16.8 |
| Os08t0548300-01 | Rice | nucleus | 13.0 | 16.07 |
| Bra024007.1-P | Field mustard | nucleus | 19.63 | 15.85 |
| CDY63645 | Canola | nucleus | 19.36 | 15.8 |
| CDY13433 | Canola | nucleus | 19.36 | 15.67 |
| Os02t0150700-01 | Rice | extracellular | 26.53 | 15.6 |
| Os09t0535100-01 | Rice | nucleus | 12.47 | 14.46 |
| AT4G31450.2 | Thale cress | nucleus | 18.83 | 14.29 |
| Os06t0125800-01 | Rice | nucleus | 9.81 | 14.18 |
| Os01t0159300-01 | Rice | nucleus | 18.83 | 14.17 |
| Bra009800.1-P | Field mustard | nucleus | 15.12 | 13.9 |
| Os05t0564300-01 | Rice | nucleus | 17.77 | 13.4 |
| Os01t0667700-02 | Rice | nucleus | 18.57 | 13.36 |
| KRH61936 | Soybean | nucleus | 19.63 | 13.29 |
| Os05t0163400-03 | Rice | nucleus | 18.04 | 12.76 |
| Os04t0648800-01 | Rice | nucleus | 20.95 | 11.84 |
| Os04t0185500-01 | Rice | nucleus | 20.42 | 10.86 |
Protein Annotations
| EnsemblPlants:Os08t0241400-00 | EnsemblPlantsGene:Os08g0241400 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0008270 |
| InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF44 |
| PFAM:PF13639 | PFscan:PS50089 | ProteinID:BAT04498.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00039389C0 | UniProt:A0A0N7KPI3 | MapMan:35.1 | : | : | : |
Description
RING finger proteinSimilar to protein binding protein. (Os08t0241400-00)
Coordinates
chr8:+:8581992..8584058
Molecular Weight (calculated)
41896.3 Da
IEP (calculated)
9.284
GRAVY (calculated)
-0.758
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MMTYSSLKLE LAPFFFQLNM DETMGRRTVG GLLLTKGGSI LVYREDSPRH KATACCTRTG CSSKLFRDKE KKMRRPTKEA VIPQRSLLVS GSNRLLPQGR
101: MAYGSRRNAA GTCSETGNRP RRETAGQDLL DHLKERVNSS RKRSLSGGSS PSSSNTSSAG SLSSSSRSIS RQLHRSVPKT RKDGGTNGSN ARMRSDSGGN
201: SGANVHRRAD LQGPTGRFVS QSLLRHRSRN QEEPVSHLEN SLNDSTEYWR FGVDESDEVR LSIDASSDRH RGMRMDIDDM SYEELLALGE TIGTVSTGLP
301: EDELSNCLKR IHYVPSASTS HEDGDIKCII CQEEYLPAEE VAEMACKHYY HLACIQQWLR QKNWCPICKS VGSATKH
101: MAYGSRRNAA GTCSETGNRP RRETAGQDLL DHLKERVNSS RKRSLSGGSS PSSSNTSSAG SLSSSSRSIS RQLHRSVPKT RKDGGTNGSN ARMRSDSGGN
201: SGANVHRRAD LQGPTGRFVS QSLLRHRSRN QEEPVSHLEN SLNDSTEYWR FGVDESDEVR LSIDASSDRH RGMRMDIDDM SYEELLALGE TIGTVSTGLP
301: EDELSNCLKR IHYVPSASTS HEDGDIKCII CQEEYLPAEE VAEMACKHYY HLACIQQWLR QKNWCPICKS VGSATKH
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.