Factsheet for Os01t0667700-02

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G061010.4	Barley	nucleus	76.14	75.86
TraesCS3D01G244600.1	Wheat	nucleus	76.34	75.76
TraesCS3B01G272400.4	Wheat	nucleus	76.14	75.57
TraesCS3A01G246900.3	Wheat	nucleus	75.57	75.14
EES03404	Sorghum	nucleus	72.71	73.13
Zm00001d011541_P004	Maize	nucleus	71.37	70.57
Os05t0564300-01	Rice	nucleus	50.19	52.6
VIT_19s0014g01850.t01	Wine grape	nucleus	24.05	23.42
Solyc12g014070.1.1	Tomato	nucleus	23.28	22.8
PGSC0003DMT400039631	Potato	nucleus	23.28	22.76
KRH26195	Soybean	nucleus	19.85	22.71
VIT_03s0088g00930.t01	Wine grape	nucleus, plastid	16.98	22.65
KRH30071	Soybean	cytosol	14.69	22.38
KRH55161	Soybean	nucleus	19.47	22.27
CDY24110	Canola	nucleus	19.47	22.17
Bra039659.1-P	Field mustard	nucleus	19.47	22.17
VIT_03s0097g00680.t01	Wine grape	nucleus	17.75	22.09
CDY26006	Canola	nucleus	19.08	21.64
VIT_03s0088g01090.t01	Wine grape	nucleus	18.7	21.44
KRH22017	Soybean	nucleus	21.56	21.4
CDY25871	Canola	nucleus	19.47	21.34
CDY55839	Canola	nucleus	19.85	21.27
Bra038109.1-P	Field mustard	nucleus	19.47	21.25
KRH55165	Soybean	nucleus	12.6	21.22
Os05t0550000-00	Rice	nucleus	14.5	20.88
CDY68521	Canola	nucleus	17.56	20.86
AT1G53190.1	Thale cress	nucleus	19.66	20.85
Os03t0173900-01	Rice	nucleus	9.73	20.4
Solyc10g007140.2.1	Tomato	nucleus	20.04	20.23
Bra027282.1-P	Field mustard	nucleus	17.18	20.22
CDX97629	Canola	nucleus	16.98	20.18
AT3G15070.1	Thale cress	nucleus	18.7	20.16
CDX75805	Canola	cytosol	16.98	20.09
CDX82450	Canola	nucleus	17.18	20.09
PGSC0003DMT400054921	Potato	nucleus	19.85	20.04
Bra001582.1-P	Field mustard	nucleus	16.41	19.68
KRH55090	Soybean	nucleus	13.74	19.35
Os04t0571200-01	Rice	nucleus	9.16	18.9
Os06t0125800-01	Rice	nucleus	9.35	18.77
Os05t0163400-03	Rice	nucleus	19.08	18.76
Os08t0241400-00	Rice	nucleus	13.36	18.57
Os01t0159300-01	Rice	nucleus	17.75	18.56
Os04t0603200-01	Rice	nucleus	10.11	16.11
Os09t0535100-01	Rice	nucleus	9.73	15.69
Os04t0648800-01	Rice	nucleus	19.27	15.14
Os08t0548300-01	Rice	nucleus	8.59	14.75
Os06t0695600-01	Rice	nucleus	16.03	14.51
Os04t0185500-01	Rice	nucleus	19.08	14.1
PGSC0003DMT400032385	Potato	nucleus	20.99	13.55
Os02t0150700-01	Rice	extracellular	16.41	13.42
Solyc07g062720.1.1	Tomato	nucleus	19.66	13.29

Protein Annotations

EnsemblPlants:Os01t0667700-02	EnsemblPlantsGene:Os01g0667700	EntrezGene:4326322	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR22937	PANTHER:PTHR22937:SF67	PFAM:PF13639	PFscan:PS50089
ProteinID:BAD73651.1	ProteinID:BAS73593.1	ProteinID:BAS73594.1	RefSeq:XP_015615383.1	SEG:seg	SMART:SM00184
SUPFAM:SSF57850	UniParc:UPI000048E027	MapMan:35.1	:	:	:

Description

RING finger protein, E3 ligase OsZFP1Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-01);Similar to RING-finger protein like. (Os01t0667700-02);Similar to RING-finger protein like. (Os01t0667700-03);Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0667700-04)

Coordinates

chr1:-:27303264..27312272

Molecular Weight (calculated)

57756.0 Da

IEP (calculated)

6.582

GRAVY (calculated)

-0.591

Length

524 amino acids

Sequence
(BLAST)

001: MAYRNTVCTP QVIDLETEQG HSHIHSESFN RTGNDSSDQG AQHAVRGVGN ATNIGLSDMR SYYDAGMNHP HQPVHNLPPN LGVDSGFVFP SSMYNPCMST
101: TSMNQYVSHT QSFGLPSNQV VLGSMDEGSR NENAGESARG FIKRKNAAVA GSYHCANGFA SSSSSHASLN PTHRPWDPSF ESNVLPNTAS YNPSEYHSQT
201: SWPSMEGSSI PSNGFNLMGA HPESAQHGNY AFPTSHISQC FQPTSNTWIS QSANGIADGI PQWEYVNGMN NAPAGRFSRS GMTETVNGSF REYQNGPSTL
301: CRGPLPYFHQ HAGMHAHNLL DHTQVQAPYQ QCHNNPVLHG VNHSGNRFHL GPRIPVLFSN SERTFGPPHH PLLANPVNHR NIRILPPEHA TIMDFSRLYE
401: VSNVVDEHRD MRLDIDSMTY EELLALEEQI GDVNTGLAKS YIVEKLKTSL FVPGSSCMSN KSSESSMEND ACIICQEEYQ VKECIGTLDC GHRYHEDCIK
501: QWLMVKNLCP ICKTTALSTG RRSG

Best Arabidopsis Sequence Match ( AT5G42940.1 )
(BLAST)

001: MQGERASLGY LSEALNFEHG SSSSNGVIDH WENIHSLGDN DLQDYMIANS ESNTSLANSV YHEQQGLRRF SLGEASSSGT KDEASSHNEQ RMETRCFDGR
101: GNEIIDLDPV FAQPSGTNQP VQNVNLNAEY IEIHEDINPY RGRSGFIEAN GPGTRVSQPG RSFEENGVGT GSSVEGRRAS CKRKALEGSI SQSSSGGYHD
201: FQRGESSSWT PGSTVFRPGN GLNISGSLDN GPRGMVSGTV PNFPVSAPNF PVSAIAESSS RNICVRSNPS DHQETVNPST FAAGTVVRRP VPPSQLNLSR
301: HLPADQHSLD LRPGQSFVVS RNPNSTPVSI PPGSRTMLPP FRWTGSSLVG GTSNSTAPVE RNLHLDETRS RSIPGNTLEI PMFAAPEVGN FARSQSSRNV
401: TNGNLNSASS VSRTGSTTSV PPPPPPSSNL AWTSYQNSPH YQRRRTERSE LARRSLLSSL AADATNQRSG DHPTLRSLAP PASSDGLVLQ PGGDNSQMHN
501: RAYSRAGPLF DRQGDSVVGI PHPLRALAAA SRGRSRLMVS QMQNVLDVMR RDANNNNLRL EDVMLLNHSV LFDGATGHDR YRDMRLDVDN MSYEELLALE
601: ERIGDVCTGV NEETISNRLK QRKYKSNTKS PQDAEPCCVC QEEYTEGEDM GTLECGHEFH SQCIKEWLKQ KNLCPICKTT GLNTAKKRRI A

Arabidopsis Description

RHG1AProbable E3 ubiquitin-protein ligase RHG1A [Source:UniProtKB/Swiss-Prot;Acc:Q9FMM4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.