Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES00281 | Sorghum | nucleus | 56.49 | 54.95 |
| Zm00001d008649_P003 | Maize | cytosol | 56.09 | 53.32 |
| TraesCS3D01G105300.1 | Wheat | cytosol | 53.09 | 51.35 |
| Zm00001d039769_P002 | Maize | cytosol | 55.69 | 50.64 |
| TraesCS3B01G120600.2 | Wheat | cytosol | 52.3 | 50.58 |
| TraesCS3A01G103000.1 | Wheat | nucleus | 52.1 | 50.29 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 52.89 | 44.99 |
| Os05t0163400-03 | Rice | nucleus | 46.11 | 43.34 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.58 | 42.86 |
| VIT_16s0022g00290.t01 | Wine grape | nucleus | 5.79 | 38.16 |
| VIT_08s0040g02160.t01 | Wine grape | nucleus | 23.15 | 21.25 |
| KRG95955 | Soybean | nucleus | 23.15 | 21.13 |
| PGSC0003DMT400004449 | Potato | nucleus | 22.75 | 21.03 |
| Solyc09g007530.2.1 | Tomato | nucleus | 22.75 | 21.03 |
| KRH32434 | Soybean | nucleus | 22.16 | 20.59 |
| KRH67668 | Soybean | nucleus | 22.55 | 20.51 |
| KRH19845 | Soybean | nucleus | 22.16 | 20.18 |
| CDX79718 | Canola | nucleus | 20.96 | 19.77 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 20.16 | 19.73 |
| CDY55435 | Canola | nucleus | 20.76 | 19.7 |
| Os04t0571200-01 | Rice | nucleus | 9.98 | 19.68 |
| GSMUA_Achr5P08460_001 | Banana | nucleus | 22.36 | 19.51 |
| CDY68424 | Canola | nucleus | 20.76 | 19.37 |
| Bra017205.1-P | Field mustard | nucleus | 20.56 | 19.18 |
| Bra023101.1-P | Field mustard | nucleus | 20.16 | 18.95 |
| Os08t0241400-00 | Rice | nucleus | 14.17 | 18.83 |
| CDY46757 | Canola | nucleus | 19.56 | 18.39 |
| VIT_13s0019g04100.t01 | Wine grape | extracellular | 20.56 | 18.23 |
| Os05t0550000-00 | Rice | nucleus | 13.17 | 18.13 |
| Os01t0667700-02 | Rice | nucleus | 18.56 | 17.75 |
| Os03t0173900-01 | Rice | nucleus | 8.58 | 17.2 |
| AT2G37150.3 | Thale cress | endoplasmic reticulum, extracellular | 20.36 | 17.03 |
| Os05t0564300-01 | Rice | nucleus | 16.57 | 16.6 |
| Os04t0603200-01 | Rice | nucleus | 10.78 | 16.41 |
| Os08t0548300-01 | Rice | nucleus | 9.58 | 15.74 |
| Os06t0125800-01 | Rice | nucleus | 8.18 | 15.71 |
| Os09t0535100-01 | Rice | nucleus | 9.98 | 15.38 |
| Os04t0648800-01 | Rice | nucleus | 19.56 | 14.69 |
| Os06t0695600-01 | Rice | nucleus | 16.77 | 14.51 |
| Os02t0150700-01 | Rice | extracellular | 17.37 | 13.57 |
| Os04t0185500-01 | Rice | nucleus | 18.76 | 13.26 |
| Bra028576.1-P | Field mustard | cytosol | 6.19 | 10.95 |
| CDY47948 | Canola | nucleus | 8.38 | 8.35 |
| Bra036336.1-P | Field mustard | nucleus | 8.38 | 8.35 |
Protein Annotations
| EMBL:AK073728 | EMBL:HQ324798 | EnsemblPlants:Os01t0159300-01 | EnsemblPlantsGene:Os01g0159300 | EntrezGene:4324061 | Gene3D:3.30.40.10 |
| InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 |
| PFAM:PF13639 | PFscan:PS50089 | ProteinID:BAF03997.1 | ProteinID:BAS70513.1 | RefSeq:XP_015620967.1 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0000DD898A | UniProt:Q0JQI1 | MapMan:35.1 | : |
Description
Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os01t0159300-01)
Coordinates
chr1:-:3100294..3105226
Molecular Weight (calculated)
54653.0 Da
IEP (calculated)
8.408
GRAVY (calculated)
-0.579
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MARHHGNHSL LPEMVQPNNE QLNQPLPLGQ KLFVHAGNDA ALKIGPSYHG NVAIRSNDLP SSSRVAQYSG HRVKNTGTLH NSYVHYPAGS SGGHVSYNPQ
101: TEPVITYPHR SEGEFARGSS QIDNRTAAVK RKNPVIYPEY SINGDGYCAG SSSSTQFSNY PQPAPFSESL HRQMPPSVGP INWNDQSLVN QEGSQRNVRA
201: RHNFNNISLE PRPVHSTSNV SQSTSMKRNG PSFSTRMRTM PSGASGMHSG EMPYTMGSSN SSVPVPTLQG SSSSAIFASG VFAPRHVHGD TVPSYIHLPS
301: VASSSSTAIP HEVIIPSYQP ATSATTSTPM RASQPLPVRA VASSRHARNV LIGHANSGRN RRARSSYYGI QPLMIDAQQL IMMQQFALRE SREAQDPHRA
401: MRLDIDNMSY EDLLALGESI GNVCTGLVDE KISGCVREVI YCSSDEQQND QDDGKCAICL EEYKDNSLLG ILKCNHDFHT DCVKKWLKEK NSCPICKSAA
501: A
101: TEPVITYPHR SEGEFARGSS QIDNRTAAVK RKNPVIYPEY SINGDGYCAG SSSSTQFSNY PQPAPFSESL HRQMPPSVGP INWNDQSLVN QEGSQRNVRA
201: RHNFNNISLE PRPVHSTSNV SQSTSMKRNG PSFSTRMRTM PSGASGMHSG EMPYTMGSSN SSVPVPTLQG SSSSAIFASG VFAPRHVHGD TVPSYIHLPS
301: VASSSSTAIP HEVIIPSYQP ATSATTSTPM RASQPLPVRA VASSRHARNV LIGHANSGRN RRARSSYYGI QPLMIDAQQL IMMQQFALRE SREAQDPHRA
401: MRLDIDNMSY EDLLALGESI GNVCTGLVDE KISGCVREVI YCSSDEQQND QDDGKCAICL EEYKDNSLLG ILKCNHDFHT DCVKKWLKEK NSCPICKSAA
501: A
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.