Factsheet for Zm00001d008649_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00281	Sorghum	nucleus	84.44	86.41
Zm00001d039769_P002	Maize	cytosol	83.49	79.85
Os01t0159300-01	Rice	nucleus	53.32	56.09
TraesCS3D01G105300.1	Wheat	cytosol	53.13	54.05
TraesCS3B01G120600.2	Wheat	cytosol	52.75	53.67
TraesCS3A01G103000.1	Wheat	nucleus	51.8	52.6
GSMUA_AchrUn_...	Banana	nucleus	10.44	49.11
HORVU3Hr1G018800.2	Barley	cytosol, plastid	52.75	47.2
VIT_16s0022g00290.t01	Wine grape	nucleus	5.69	39.47
Zm00001d026446_P001	Maize	cytosol	12.33	35.33
Zm00001d015453_P001	Maize	cytosol	7.59	31.01
Zm00001d019616_P001	Maize	cytosol	7.59	31.01
Zm00001d013776_P001	Maize	cytosol	7.02	28.68
Zm00001d037536_P006	Maize	mitochondrion, plastid	31.12	26.67
Zm00001d021225_P002	Maize	cytosol	8.73	26.29
VIT_08s0040g02160.t01	Wine grape	nucleus	23.53	22.71
PGSC0003DMT400004449	Potato	nucleus	22.77	22.14
Solyc09g007530.2.1	Tomato	nucleus	22.58	21.96
KRH32434	Soybean	nucleus	21.63	21.15
KRH19845	Soybean	nucleus	21.63	20.73
KRG95955	Soybean	nucleus	21.44	20.58
KRH67668	Soybean	nucleus	21.44	20.51
Zm00001d024406_P002	Maize	nucleus	13.85	20.39
CDY55435	Canola	nucleus	20.11	20.08
CDX79718	Canola	nucleus	20.11	19.96
CDY68424	Canola	nucleus	20.11	19.74
Bra023101.1-P	Field mustard	nucleus	19.92	19.7
Zm00001d043784_P002	Maize	nucleus	12.9	19.65
Zm00001d011636_P001	Maize	nucleus	12.52	19.53
Zm00001d026248_P001	Maize	nucleus	14.04	19.47
Bra017205.1-P	Field mustard	nucleus	19.73	19.37
CDY46757	Canola	nucleus	19.35	19.14
Zm00001d045517_P001	Maize	mitochondrion, nucleus	9.68	19.03
Zm00001d002416_P002	Maize	endoplasmic reticulum, extracellular, vacuole	14.04	18.64
Zm00001d015323_P002	Maize	cytosol	3.98	18.58
VIT_13s0019g04100.t01	Wine grape	extracellular	19.92	18.58
GSMUA_Achr11P...	Banana	cytosol, nucleus, peroxisome	18.03	18.55
Zm00001d048301_P001	Maize	cytosol	8.16	17.84
GSMUA_Achr5P08460_001	Banana	nucleus	19.35	17.77
Zm00001d038909_P001	Maize	cytosol, mitochondrion	12.52	17.19
AT2G37150.3	Thale cress	endoplasmic reticulum, extracellular	19.35	17.03
Zm00001d011541_P004	Maize	nucleus	16.89	16.79
Zm00001d053212_P002	Maize	cytosol, mitochondrion, nucleus, plastid	9.11	16.72
Zm00001d009571_P002	Maize	nucleus	15.94	16.41
Zm00001d002080_P002	Maize	nucleus	20.3	16.14
Zm00001d026445_P001	Maize	nucleus	19.92	16.03
Zm00001d004300_P003	Maize	nucleus	20.68	15.71
Zm00001d027868_P004	Maize	cytosol	7.97	15.56
Zm00001d015289_P001	Maize	nucleus	16.13	15.02
Zm00001d021314_P005	Maize	cytosol, mitochondrion, nucleus	9.11	14.91
Zm00001d025027_P002	Maize	nucleus	19.54	14.8
Zm00001d006226_P001	Maize	peroxisome	8.92	14.78
Zm00001d002624_P003	Maize	cytosol	8.73	13.69
Zm00001d014609_P002	Maize	nucleus	15.18	13.68
Zm00001d039015_P002	Maize	cytosol	9.87	12.71
Bra028576.1-P	Field mustard	cytosol	6.45	12.01
CDY47948	Canola	nucleus	8.92	9.34
Bra036336.1-P	Field mustard	nucleus	8.92	9.34

Protein Annotations

EntrezGene:100277549	Gene3D:3.30.40.10	MapMan:35.1	ProteinID:AQK90352.1	ProteinID:AQK90353.1	ProteinID:AQK90354.1
ProteinID:AQK90355.1	EMBL:BT062519	UniProt:C0P2K0	InterPro:IPR001841	InterPro:IPR013083	PFAM:PF13639
PFscan:PS50089	PANTHER:PTHR22937	PANTHER:PTHR22937:SF45	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI0001948C36
EnsemblPlantsGene:Zm00001d008649	EnsemblPlants:Zm00001d008649_P003	EnsemblPlants:Zm00001d008649_T003	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

RING/U-box superfamily protein

Coordinates

chr8:-:15902709..15910403

Molecular Weight (calculated)

57097.3 Da

IEP (calculated)

8.116

GRAVY (calculated)

-0.468

Length

527 amino acids

Sequence
(BLAST)

001: MARNNEGHLQ LPEMDHIQPK NTPHNEPLPL GQKLMLHHGS DAPLRIGHSS HENMRLRSND LPPLSHTVQT QGYRVGNPGA SHAPFVHCHA GSSSSHLPEP
101: AVNYPHRSEE GFAPVGSHMD NRRAATKRKD PIVHPAGISA TGYYVGSSSN TQLSNSVQPN PAPLSEPLLR QIPLSIDRSG WDGLHLIHQE GFQRNVRARQ
201: RHSHNISLEP RTASTYPLNS VHVPSFGSTT SASLSMSVER NQASVSVPTR NVPSGAPGIT SRSLTRRAYY PVVGSSNSSV DVVPTICGSS GAAIFANGGY
301: ALNADAGTVS IYPNPAPATS SGSITMPMPM LHQMVIQSHP PATSAATSTS MWIAQPLPAR TAAASRHARR VSAGLANNGR YRRARSSYYS LHPLMMVEAE
401: RFMMDQLVFY ESRAAAADPH RDMRLDIDNM SYEDLLALGE SMGNVNTGLA DEKISKCVKE VVCCSSDQMQ TDQDDQDDDG SCVICLEGYR DKDMLGILKC
501: RHDFHAGCIK KWLQTKNSCP VCKAAAA

Best Arabidopsis Sequence Match ( AT5G10650.1 )
(BLAST)

001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI

Arabidopsis Description

At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.