Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017205.1-P | Field mustard | nucleus | 97.02 | 97.02 |
| CDY55435 | Canola | nucleus | 94.79 | 96.4 |
| CDX79718 | Canola | nucleus | 78.4 | 79.28 |
| CDY46757 | Canola | nucleus | 77.09 | 77.67 |
| AT2G37150.3 | Thale cress | endoplasmic reticulum, extracellular | 77.28 | 69.28 |
| VIT_16s0022g00290.t01 | Wine grape | nucleus | 7.45 | 52.63 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.12 | 43.75 |
| VIT_13s0019g04100.t01 | Wine grape | extracellular | 35.94 | 34.16 |
| CDY13429 | Canola | cytosol | 13.59 | 28.29 |
| GSMUA_Achr5P08460_001 | Banana | nucleus | 27.93 | 26.13 |
| CDX77848 | Canola | nucleus | 8.94 | 22.64 |
| GSMUA_Achr11P... | Banana | cytosol, nucleus, peroxisome | 21.42 | 22.46 |
| CDY67192 | Canola | nucleus | 8.75 | 22.07 |
| CDX97032 | Canola | plastid | 13.41 | 21.49 |
| CDY53710 | Canola | nucleus | 9.68 | 21.49 |
| CDY63645 | Canola | nucleus | 18.44 | 21.43 |
| CDY71882 | Canola | plastid | 13.78 | 21.14 |
| CDY13433 | Canola | nucleus | 18.25 | 21.03 |
| CDX93901 | Canola | nucleus | 9.31 | 20.83 |
| Os01t0159300-01 | Rice | nucleus | 19.37 | 20.76 |
| CDY32973 | Canola | nucleus | 15.83 | 20.73 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 20.3 | 20.3 |
| Zm00001d008649_P003 | Maize | cytosol | 19.74 | 20.11 |
| Os05t0163400-03 | Rice | nucleus | 19.93 | 20.07 |
| TraesCS1B01G129600.1 | Wheat | nucleus | 19.93 | 20.04 |
| EES00281 | Sorghum | nucleus | 19.18 | 20.0 |
| CDY24110 | Canola | nucleus | 17.13 | 20.0 |
| TraesCS1D01G111500.1 | Wheat | nucleus | 19.93 | 19.96 |
| TraesCS1A01G107600.1 | Wheat | nucleus | 19.93 | 19.93 |
| CDY26006 | Canola | nucleus | 17.13 | 19.91 |
| CDY11092 | Canola | cytosol, plastid | 12.85 | 19.83 |
| CDY43590 | Canola | nucleus | 15.46 | 19.71 |
| CDY25871 | Canola | nucleus | 17.5 | 19.67 |
| Zm00001d039769_P002 | Maize | cytosol | 20.11 | 19.6 |
| CDX68213 | Canola | nucleus, plastid | 12.66 | 19.48 |
| CDY55839 | Canola | nucleus | 17.5 | 19.22 |
| EES19093 | Sorghum | nucleus | 18.81 | 18.77 |
| TraesCS3D01G105300.1 | Wheat | cytosol | 18.06 | 18.73 |
| TraesCS3B01G120600.2 | Wheat | cytosol | 18.06 | 18.73 |
| CDY17114 | Canola | nucleus | 18.44 | 18.64 |
| CDX91624 | Canola | nucleus | 7.64 | 18.64 |
| CDX97629 | Canola | nucleus | 15.27 | 18.59 |
| CDX73013 | Canola | plastid | 12.29 | 18.59 |
| CDX85750 | Canola | nucleus | 13.22 | 18.39 |
| CDX82450 | Canola | nucleus | 15.27 | 18.3 |
| CDY60141 | Canola | plastid | 12.1 | 18.21 |
| TraesCS3A01G103000.1 | Wheat | nucleus | 17.5 | 18.11 |
| CDX75805 | Canola | cytosol | 14.9 | 18.06 |
| CDY68521 | Canola | nucleus | 14.71 | 17.91 |
| CDY27083 | Canola | nucleus | 7.26 | 17.81 |
| CDX83878 | Canola | nucleus | 11.73 | 17.65 |
| CDX96741 | Canola | nucleus | 11.73 | 17.31 |
| CDY68658 | Canola | nucleus | 15.08 | 17.27 |
| CDY17061 | Canola | nucleus | 18.99 | 16.83 |
| CDX88140 | Canola | nucleus | 15.08 | 16.8 |
| CDX95473 | Canola | nucleus | 14.34 | 16.59 |
| CDY43220 | Canola | nucleus | 18.81 | 16.58 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 17.88 | 16.3 |
| CDY22376 | Canola | nucleus | 18.25 | 15.94 |
| CDX97044 | Canola | nucleus | 15.08 | 15.88 |
| CDY24595 | Canola | nucleus | 9.31 | 15.87 |
| CDY62314 | Canola | nucleus | 17.32 | 15.71 |
| CDY37230 | Canola | nucleus | 17.13 | 15.62 |
| CDY40109 | Canola | nucleus | 5.4 | 15.59 |
| CDY00512 | Canola | nucleus | 7.82 | 15.38 |
| CDX78393 | Canola | nucleus | 14.15 | 15.38 |
| CDY25357 | Canola | nucleus | 9.12 | 15.31 |
| CDY42218 | Canola | nucleus | 9.5 | 15.27 |
| CDX71531 | Canola | nucleus | 18.06 | 15.23 |
| CDY33429 | Canola | nucleus | 9.31 | 15.15 |
| CDX70363 | Canola | nucleus | 13.59 | 15.02 |
| CDX69813 | Canola | mitochondrion | 14.9 | 15.01 |
| CDY31919 | Canola | nucleus | 7.45 | 14.65 |
| CDX91625 | Canola | cytosol | 5.96 | 13.97 |
| CDY27082 | Canola | cytosol | 6.15 | 13.87 |
| CDY47948 | Canola | nucleus | 9.5 | 10.14 |
| CDY69560 | Canola | nucleus | 8.01 | 8.45 |
| CDY36635 | Canola | nucleus | 7.26 | 6.54 |
Protein Annotations
| EnsemblPlants:CDY68424 | EnsemblPlantsGene:GSBRNA2T00074197001 | Gene3D:3.30.40.10 | GO:A0A078JNS7 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF47 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY68424 | ProteinID:CDY68424.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE775F |
| UniProt:A0A078JNS7 | MapMan:35.2 | : | : | : | : |
Description
BnaAnng27220DBnaAnng27220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JNS7]
Coordinates
chrLK037318:+:1632..4053
Molecular Weight (calculated)
60281.9 Da
IEP (calculated)
7.177
GRAVY (calculated)
-0.892
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MGHRHFPGSF QFFDDEQDQG WNHIHPEHPY TSLARTGTSV SRSHVNPAGN MLNEGMPFSS HWNSSTGPNA YTASGHGVER PHYNPGTSGP SHVPFMSTAA
101: ATFSAPHEHY VTSASSSYCN SQTWSLDSYV DLHMENVRGA QKRKTPCDSS VYEMGSSSHY HGGRTSSDIP FSSELDMGKS TTRDHGPHYM PWLMNPSYRS
201: NNLSIRGESS SRNVRSRPTL DLETSVDRNI FSRSLDLDSH PTHHNVEHSS SGQFPGQTSH RNKDWNWNFP RHSPVPRDLN GFSPKTNNFL PTRSVANSTS
301: VDTSWYHQGL IGNRNSTVSH GFPGTSTQSA TSSRFSHRST PTYRSSSNGL RLEHSASSSG DRSPFVTETY PSRHLRPPPH ISWRSSDRPG RRRSSYERFQ
401: PPFDEVALHE PFSSQGFMAV DHQQHYGSRN MHDHHRDLRL DIDDMTYEDL LDLVERIGSV NTGLSNGAIA SCLLETIFYP LYQTDEERKC AICLEEYKEG
501: EELGELKGCG HDYHGGCIKK WLSLKNSCPI CKSPAFT
101: ATFSAPHEHY VTSASSSYCN SQTWSLDSYV DLHMENVRGA QKRKTPCDSS VYEMGSSSHY HGGRTSSDIP FSSELDMGKS TTRDHGPHYM PWLMNPSYRS
201: NNLSIRGESS SRNVRSRPTL DLETSVDRNI FSRSLDLDSH PTHHNVEHSS SGQFPGQTSH RNKDWNWNFP RHSPVPRDLN GFSPKTNNFL PTRSVANSTS
301: VDTSWYHQGL IGNRNSTVSH GFPGTSTQSA TSSRFSHRST PTYRSSSNGL RLEHSASSSG DRSPFVTETY PSRHLRPPPH ISWRSSDRPG RRRSSYERFQ
401: PPFDEVALHE PFSSQGFMAV DHQQHYGSRN MHDHHRDLRL DIDDMTYEDL LDLVERIGSV NTGLSNGAIA SCLLETIFYP LYQTDEERKC AICLEEYKEG
501: EELGELKGCG HDYHGGCIKK WLSLKNSCPI CKSPAFT
001: MRSEVYNMVG TCYKGLMGHR HFLGSSQFFD DEHDQGWNHT HPEHPYSSQA TSGTSENRSH VYPAENMLNE GMPVSSHWNS SPGPNAYTDS GHSVERPHYN
101: PGVSGPSHDP SVNSTVPTFS APHENYVTFA SSSSYNSQTW SNASYVDHQS MESVRGAQKR KRPCPSSIYE MGSSSQYHGD RTPADTHFPS ELHLGKSITH
201: DHDPHYMPWL MNPTYRSNNL SIRGESSSRN VRSRPTLDSE TSLGRNNLPR SLSLDSHSTH HHSVDHYGSG QFPGQTSHGN KDWNCARLSP VLRDINGFSP
301: ETNNFLPARS VVNSLSVNTS GYHHHELTGN RNPTVSHGVP GTSTLSTSSS RFSHRSTSTY RSSSHGSRSG HVASSSGDRS HLVTETYPSR HLRPPPHISW
401: RSGDRPGRRR SSYERFQPPF DEVALHERFS SEEFMVEDRQ PQYYGSRNML DHHRDMRLDI DNMSYEELLD LGERIGSVNT GLSDSAISSC LLATMYYPSY
501: QTEEQRKCAI CLEEYKEKEE LGEVKGCGHD YHGRCIKKWL SMKNSCPICK SPALPDASKN SS
101: PGVSGPSHDP SVNSTVPTFS APHENYVTFA SSSSYNSQTW SNASYVDHQS MESVRGAQKR KRPCPSSIYE MGSSSQYHGD RTPADTHFPS ELHLGKSITH
201: DHDPHYMPWL MNPTYRSNNL SIRGESSSRN VRSRPTLDSE TSLGRNNLPR SLSLDSHSTH HHSVDHYGSG QFPGQTSHGN KDWNCARLSP VLRDINGFSP
301: ETNNFLPARS VVNSLSVNTS GYHHHELTGN RNPTVSHGVP GTSTLSTSSS RFSHRSTSTY RSSSHGSRSG HVASSSGDRS HLVTETYPSR HLRPPPHISW
401: RSGDRPGRRR SSYERFQPPF DEVALHERFS SEEFMVEDRQ PQYYGSRNML DHHRDMRLDI DNMSYEELLD LGERIGSVNT GLSDSAISSC LLATMYYPSY
501: QTEEQRKCAI CLEEYKEKEE LGEVKGCGHD YHGRCIKKWL SMKNSCPICK SPALPDASKN SS
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IQ07]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.