Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015967.1-P | Field mustard | nucleus | 95.77 | 95.24 |
| CDY60141 | Canola | plastid | 95.49 | 94.96 |
| CDX68213 | Canola | nucleus, plastid | 75.21 | 76.5 |
| CDY11092 | Canola | cytosol, plastid | 71.55 | 72.99 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 72.11 | 69.75 |
| CDX96741 | Canola | nucleus | 56.34 | 54.95 |
| CDX83878 | Canola | nucleus | 54.37 | 54.06 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 44.23 | 42.32 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 23.38 | 41.5 |
| KRH41763 | Soybean | nucleus | 43.94 | 41.38 |
| KRH48568 | Soybean | nucleus | 39.44 | 39.55 |
| Solyc03g118840.2.1 | Tomato | nucleus | 42.82 | 39.28 |
| PGSC0003DMT400014732 | Potato | nucleus | 42.54 | 38.92 |
| KRH39137 | Soybean | nucleus | 38.87 | 37.4 |
| PGSC0003DMT400078539 | Potato | plastid | 26.2 | 37.35 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 34.08 | 36.23 |
| KRH60461 | Soybean | nucleus | 43.94 | 36.19 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 34.37 | 35.36 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 34.08 | 35.28 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 29.3 | 34.1 |
| OQU87370 | Sorghum | nucleus | 33.24 | 33.81 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 33.24 | 33.62 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 32.11 | 33.53 |
| Zm00001d011636_P001 | Maize | nucleus | 31.55 | 33.14 |
| Zm00001d043784_P002 | Maize | nucleus | 32.11 | 32.95 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 20.0 | 32.27 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 34.08 | 31.84 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 31.55 | 31.11 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 30.42 | 31.03 |
| HORVU3Hr1G064370.1 | Barley | plastid | 33.24 | 30.65 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 29.86 | 30.64 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 29.3 | 29.8 |
| Os05t0550000-00 | Rice | nucleus | 29.58 | 28.85 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 30.14 | 28.46 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 30.42 | 28.12 |
| HORVU1Hr1G082970.1 | Barley | plastid | 28.17 | 26.53 |
| CDY13429 | Canola | cytosol | 17.18 | 23.64 |
| CDX97032 | Canola | plastid | 21.41 | 22.69 |
| CDY71882 | Canola | plastid | 21.41 | 21.71 |
| CDX85750 | Canola | nucleus | 23.1 | 21.24 |
| CDY40109 | Canola | nucleus | 10.7 | 20.43 |
| CDX77848 | Canola | nucleus | 10.7 | 17.92 |
| CDY67192 | Canola | nucleus | 10.7 | 17.84 |
| CDX95473 | Canola | nucleus | 22.82 | 17.46 |
| CDY68658 | Canola | nucleus | 22.82 | 17.27 |
| CDX78393 | Canola | nucleus | 23.94 | 17.21 |
| CDX88140 | Canola | nucleus | 22.82 | 16.8 |
| CDX91625 | Canola | cytosol | 10.7 | 16.59 |
| CDY31919 | Canola | nucleus | 12.68 | 16.48 |
| CDY00512 | Canola | nucleus | 12.68 | 16.48 |
| CDX97044 | Canola | nucleus | 23.66 | 16.47 |
| CDY27083 | Canola | nucleus | 10.14 | 16.44 |
| CDX91624 | Canola | nucleus | 10.14 | 16.36 |
| CDY53710 | Canola | nucleus | 10.99 | 16.12 |
| CDY32973 | Canola | nucleus | 18.59 | 16.1 |
| CDX70363 | Canola | nucleus | 21.97 | 16.05 |
| CDX93901 | Canola | nucleus | 10.7 | 15.83 |
| CDX69813 | Canola | mitochondrion | 23.38 | 15.57 |
| CDY43590 | Canola | nucleus | 18.03 | 15.2 |
| CDX97629 | Canola | nucleus | 17.46 | 14.06 |
| CDY27082 | Canola | cytosol | 9.3 | 13.87 |
| CDY63645 | Canola | nucleus | 18.03 | 13.85 |
| CDY13433 | Canola | nucleus | 18.03 | 13.73 |
| CDY68521 | Canola | nucleus | 16.9 | 13.61 |
| CDX75805 | Canola | cytosol | 16.9 | 13.54 |
| CDY17114 | Canola | nucleus | 19.72 | 13.18 |
| CDY24595 | Canola | nucleus | 11.55 | 13.02 |
| CDX82450 | Canola | nucleus | 16.34 | 12.95 |
| CDY25357 | Canola | nucleus | 11.55 | 12.81 |
| CDX79718 | Canola | nucleus | 19.15 | 12.81 |
| CDY55435 | Canola | nucleus | 18.87 | 12.69 |
| CDY24110 | Canola | nucleus | 16.34 | 12.61 |
| CDY26006 | Canola | nucleus | 16.34 | 12.55 |
| CDY33429 | Canola | nucleus | 11.55 | 12.42 |
| CDY17061 | Canola | nucleus | 21.13 | 12.38 |
| CDY25871 | Canola | nucleus | 16.62 | 12.34 |
| CDY62314 | Canola | nucleus | 20.56 | 12.33 |
| CDY68424 | Canola | nucleus | 18.59 | 12.29 |
| CDY42218 | Canola | nucleus | 11.55 | 12.28 |
| CDY46757 | Canola | nucleus | 18.31 | 12.2 |
| CDY43220 | Canola | nucleus | 20.85 | 12.15 |
| CDY37230 | Canola | nucleus | 20.0 | 12.05 |
| CDY55839 | Canola | nucleus | 16.34 | 11.86 |
| CDY22376 | Canola | nucleus | 19.44 | 11.22 |
| CDX71531 | Canola | nucleus | 20.0 | 11.15 |
| CDY69560 | Canola | nucleus | 7.32 | 5.11 |
| CDY47948 | Canola | nucleus | 6.48 | 4.57 |
| CDY36635 | Canola | nucleus | 7.32 | 4.36 |
Protein Annotations
| EnsemblPlants:CDX73013 | EnsemblPlantsGene:GSBRNA2T00103453001 | Gene3D:3.30.40.10 | GO:A0A078CDK8 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF98 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX73013 | ProteinID:CDX73013.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE8F4B |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC06g34610D
Coordinates
chrLK031797:-:1661497..1663447
Molecular Weight (calculated)
39124.2 Da
IEP (calculated)
9.301
GRAVY (calculated)
-0.720
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVSSEPSST STTIGQHIRL RPRNPPSFPT ADEPLVPKPT RVSKSAMSSF FLLPSNETTR KTTSSFRRLG CTSSASQQVS VPAVIRSSAD WGATKTKSKN
101: KNKGTGRDSG GSVKILTEAG DGGNACGAVP DVWCGPGVGF STDAVVDPVE ADPPRRNIPA RRKIDGGDNN ISSTSHKSNQ TEGSSVPPRR SHNQESNHYF
201: DSDLTSRGEQ TLFSDRYHRH LRQPYPNGLS EMMLLQNGLV MGGVLSSYDH FRDLRLNVDG MSYEQLLELG DRIGYVNTGL NEKQIKTCLR KVKPFNKDTP
301: LEDRKCSICQ EDYEAKDEVG KLRCGHRYHI SCVKQWLLRK NCCPVCKTMP CVSKS
101: KNKGTGRDSG GSVKILTEAG DGGNACGAVP DVWCGPGVGF STDAVVDPVE ADPPRRNIPA RRKIDGGDNN ISSTSHKSNQ TEGSSVPPRR SHNQESNHYF
201: DSDLTSRGEQ TLFSDRYHRH LRQPYPNGLS EMMLLQNGLV MGGVLSSYDH FRDLRLNVDG MSYEQLLELG DRIGYVNTGL NEKQIKTCLR KVKPFNKDTP
301: LEDRKCSICQ EDYEAKDEVG KLRCGHRYHI SCVKQWLLRK NCCPVCKTMP CVSKS
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.