Factsheet for HORVU1Hr1G082970.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G380000.2	Wheat	nucleus	69.76	76.01
TraesCS1B01G393400.2	Wheat	nucleus	70.03	75.86
TraesCS1A01G373200.1	Wheat	nucleus	68.97	74.5
Os05t0550000-00	Rice	nucleus	53.32	55.22
EES18624	Sorghum	cytosol, mitochondrion, nucleus, plastid	53.32	53.46
Zm00001d038909_P001	Maize	cytosol, mitochondrion	53.32	52.34
HORVU3Hr1G064370.1	Barley	plastid	46.42	45.45
GSMUA_Achr4P11130_001	Banana	nucleus, plastid	40.05	45.21
GSMUA_Achr9P21480_001	Banana	plastid	40.32	44.71
GSMUA_Achr3P29390_001	Banana	golgi, plastid	40.85	40.53
GSMUA_Achr1P23200_001	Banana	nucleus	33.69	35.28
HORVU3Hr1G054920.1	Barley	cytosol	8.22	33.7
PGSC0003DMT400078539	Potato	plastid	22.02	33.33
VIT_17s0000g03210.t01	Wine grape	nucleus	32.36	32.88
VIT_01s0011g04080.t01	Wine grape	nucleus	27.85	29.91
Solyc03g118840.2.1	Tomato	nucleus	30.24	29.46
KRH48568	Soybean	nucleus	27.59	29.38
Solyc12g040390.1.1	Tomato	nucleus, plastid	23.61	29.18
PGSC0003DMT400014732	Potato	nucleus	29.97	29.12
KRH41763	Soybean	nucleus	28.65	28.65
KRH39137	Soybean	nucleus	27.59	28.18
CDX73013	Canola	plastid	26.53	28.17
Bra003830.1-P	Field mustard	nucleus, plastid	25.2	28.02
CDY60141	Canola	plastid	26.53	28.01
Bra015967.1-P	Field mustard	nucleus	26.53	28.01
Bra016574.1-P	Field mustard	nucleus	26.53	27.93
CDX96741	Canola	nucleus	26.53	27.47
CDX68213	Canola	nucleus, plastid	24.67	26.65
CDX83878	Canola	nucleus	25.2	26.61
CDY11092	Canola	cytosol, plastid	24.14	26.15
AT1G73760.1	Thale cress	nucleus, plastid	24.93	25.61
KRH60461	Soybean	nucleus	28.12	24.59
AT1G17970.1	Thale cress	nucleus	23.87	24.46
Solyc05g008840.1.1	Tomato	nucleus, plastid	14.06	24.09
AT4G00070.1	Thale cress	nucleus	11.41	24.02
HORVU5Hr1G080540.5	Barley	nucleus	9.28	20.35
HORVU2Hr1G101370.5	Barley	nucleus	19.1	19.2
HORVU7Hr1G009940.2	Barley	nucleus	10.88	17.23
AT1G36950.1	Thale cress	cytosol	9.55	15.93
HORVU2Hr1G094980.4	Barley	cytosol	10.88	15.47
HORVU5Hr1G082790.2	Barley	nucleus	13.26	14.45
HORVU7Hr1G057310.5	Barley	cytosol, nucleus, plastid	11.41	14.38
HORVU4Hr1G055690.5	Barley	peroxisome, plastid	11.94	12.78
HORVU1Hr1G087900.1	Barley	cytosol	17.51	12.69
HORVU2Hr1G113970.2	Barley	cytosol, nucleus	18.83	12.28
HORVU6Hr1G022370.10	Barley	mitochondrion	22.55	12.23
HORVU1Hr1G024190.2	Barley	nucleus	17.24	12.1
HORVU3Hr1G061010.4	Barley	nucleus	16.71	11.98
HORVU7Hr1G098540.1	Barley	nucleus	18.57	11.95
HORVU3Hr1G018800.2	Barley	cytosol, plastid	17.51	11.21
HORVU2Hr1G113930.2	Barley	nucleus	18.83	10.86
HORVU2Hr1G003340.5	Barley	nucleus	18.04	9.63
HORVU3Hr1G054870.1	Barley	cytosol, mitochondrion	6.1	5.36

Protein Annotations

EnsemblPlants:HORVU1Hr1G082970.1	EnsemblPlantsGene:HORVU1Hr1G082970	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR22937	PANTHER:PTHR22937:SF63	PFAM:PF13639	PFscan:PS50089	SEG:seg
SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI000B46503B	UniProt:A0A287GIB0	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr1H:+:530844532..530847327

Molecular Weight (calculated)

41745.4 Da

IEP (calculated)

9.919

GRAVY (calculated)

-0.751

Length

377 amino acids

Sequence
(BLAST)

001: KEITNCLPPL RSPPPTATPS SEPHARTPKG ACLVRSDGPR RRVGGAAAGG AAGPAGARRG LLLLSPAAGA GGGAGEQAAV ARAAPARPRL RVRRRVPXAH
101: APVAASASVR PAADDEEEDE DWRESRRRRR RRERRAARAA GGGAAPAGDV WCTCTPGIPF AAEASSVDCV VARHHHHHAP APGRRGEADR RHRERTAEQR
201: ARRVTMREHI SSSFMDSPPR FHMPFHDADL LHSGRHRHIT GFGHPYDRTE EEIMMFRTRL LLGRMGMYDQ YQDWRLDVDN MNYEELLALE DRIGYVSTGL
301: REDEIVRGLR VGKHQAFERK HFSTETERRC SICQEDFEAS EEVGRLSCGH GYHVHCIKQW LSRKNACPLC KIPVSKP

Best Arabidopsis Sequence Match ( AT1G73760.1 )
(BLAST)

001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS

Arabidopsis Description

Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.