Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 95.8 | 59.14 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 43.82 | 32.08 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 7.93 | 9.07 |
| HORVU2Hr1G003340.5 | Barley | nucleus | 13.99 | 8.5 |
| HORVU3Hr1G064370.1 | Barley | plastid | 6.76 | 7.53 |
| HORVU2Hr1G113970.2 | Barley | cytosol, nucleus | 9.32 | 6.92 |
| HORVU2Hr1G113930.2 | Barley | nucleus | 10.49 | 6.88 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 1.4 | 6.52 |
| HORVU1Hr1G082970.1 | Barley | plastid | 5.36 | 6.1 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 7.23 | 5.96 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 6.99 | 5.7 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 6.29 | 5.03 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 3.5 | 5.02 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 6.76 | 4.92 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 3.73 | 4.62 |
| Zm00001d037536_P006 | Maize | mitochondrion, plastid | 6.29 | 4.39 |
| HORVU7Hr1G009940.2 | Barley | nucleus | 2.1 | 3.78 |
| HORVU5Hr1G080540.5 | Barley | nucleus | 1.4 | 3.49 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 2.1 | 3.4 |
| HORVU4Hr1G055690.5 | Barley | peroxisome, plastid | 1.17 | 1.42 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G054870.1 | EnsemblPlantsGene:HORVU3Hr1G054870 | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF60 | SEG:seg | UniParc:UPI000B465B34 |
| UniProt:A0A287L3T4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:-:408976103..408977718
Molecular Weight (calculated)
47130.8 Da
IEP (calculated)
10.529
GRAVY (calculated)
-0.891
Length
429 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEYLSRRSR TAIGFLRRGS GINRSPEETI SQNTEVQGRT SRVNPMKTRL VDNQERPRYL HGSYKYASSN VMSGSSSKFP KKFPLRKFGE EKRRQTLLEG
101: ADVAESSRRK SDVGCLEGSK KTIVENQGSD APQTETEGLT AKDDELIAPD PEVSHSAGSS GIPAHTDGSL IRSASLSSET HRQKNKELNL GRPGYSCSSS
201: FSNQPTIPRI PTVGAKPSYG LVSGEQRRVP RGLKNLGCTS VSDVLPSGCS SDSVYRMSFD AMRKRASDGD GSSRSRFISG PSSLGHSHTI YPSISGPRIR
301: TTEESVRQQK LRSRSRNIQD SAVSVRTRRT SPRDTRFRMS EETEDSVLHL NESNAGNQQS VGADFSVEEG SSERSIRPVS VELPHAIYSS SRQGSSTRTR
401: RXEHRPLVLS KAPHKHFAVW RGKEVATDA
101: ADVAESSRRK SDVGCLEGSK KTIVENQGSD APQTETEGLT AKDDELIAPD PEVSHSAGSS GIPAHTDGSL IRSASLSSET HRQKNKELNL GRPGYSCSSS
201: FSNQPTIPRI PTVGAKPSYG LVSGEQRRVP RGLKNLGCTS VSDVLPSGCS SDSVYRMSFD AMRKRASDGD GSSRSRFISG PSSLGHSHTI YPSISGPRIR
301: TTEESVRQQK LRSRSRNIQD SAVSVRTRRT SPRDTRFRMS EETEDSVLHL NESNAGNQQS VGADFSVEEG SSERSIRPVS VELPHAIYSS SRQGSSTRTR
401: RXEHRPLVLS KAPHKHFAVW RGKEVATDA
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.