Factsheet for HORVU7Hr1G098540.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G328500.1	Wheat	nucleus	89.93	91.18
TraesCS7D01G420400.1	Wheat	nucleus	87.88	89.88
TraesCS7A01G428300.2	Wheat	nucleus	83.28	83.99
Os06t0695600-01	Rice	nucleus	67.24	68.05
HORVU3Hr1G054920.1	Barley	cytosol	9.56	60.87
KXG20741	Sorghum	nucleus	58.7	58.31
Zm00001d014609_P002	Maize	nucleus	56.14	56.24
HORVU3Hr1G054870.1	Barley	cytosol, mitochondrion	32.08	43.82
HORVU6Hr1G022370.10	Barley	mitochondrion	50.0	42.16
CDX97032	Canola	plastid	23.89	41.79
CDY71882	Canola	plastid	24.23	40.57
CDX85750	Canola	nucleus	25.94	39.38
GSMUA_Achr3P05160_001	Banana	nucleus	37.88	37.69
CDY40109	Canola	nucleus	11.95	37.63
VIT_04s0008g02390.t01	Wine grape	nucleus	34.81	37.09
GSMUA_Achr6P03840_001	Banana	nucleus	22.87	36.12
Bra024009.1-P	Field mustard	nucleus	10.41	34.86
KRH04957	Soybean	nucleus	31.57	34.77
CDX88140	Canola	nucleus	28.16	34.23
PGSC0003DMT400067670	Potato	nucleus	30.72	34.09
Solyc08g006460.2.1	Tomato	nucleus	30.72	33.9
CDX95473	Canola	nucleus	26.79	33.84
CDX78393	Canola	nucleus	28.5	33.81
Bra006070.1-P	Field mustard	nucleus	28.5	33.74
CDY68658	Canola	nucleus	26.96	33.69
KRH52597	Soybean	nucleus	30.89	33.46
KRH16134	Soybean	nucleus	31.57	33.33
CDX70363	Canola	nucleus	27.3	32.92
CDX97044	Canola	nucleus	28.33	32.55
Solyc12g096420.1.1	Tomato	nucleus	30.03	31.94
CDY13429	Canola	cytosol	13.99	31.78
AT5G24870.2	Thale cress	nucleus	28.16	31.73
PGSC0003DMT400075959	Potato	nucleus	28.84	31.01
AT5G10650.2	Thale cress	nucleus	27.65	30.86
GSMUA_Achr10P...	Banana	nucleus	26.11	30.24
Bra009015.1-P	Field mustard	plastid	27.3	30.02
CDX69813	Canola	mitochondrion	27.3	30.02
KRH61936	Soybean	nucleus	27.13	28.55
HORVU2Hr1G101370.5	Barley	nucleus	17.92	28.0
Bra009800.1-P	Field mustard	nucleus	18.77	26.83
GSMUA_Achr7P15850_001	Banana	nucleus	26.45	23.85
HORVU5Hr1G080540.5	Barley	nucleus	6.14	20.93
HORVU3Hr1G064370.1	Barley	plastid	13.48	20.52
CDY63645	Canola	nucleus	16.04	20.35
HORVU7Hr1G009940.2	Barley	nucleus	8.19	20.17
Bra024007.1-P	Field mustard	nucleus	16.04	20.13
CDY13433	Canola	nucleus	15.87	19.96
AT4G31450.2	Thale cress	nucleus	16.72	19.72
HORVU1Hr1G082970.1	Barley	plastid	11.95	18.57
HORVU2Hr1G094980.4	Barley	cytosol	7.34	16.23
HORVU5Hr1G082790.2	Barley	nucleus	9.56	16.18
HORVU1Hr1G024190.2	Barley	nucleus	14.68	16.01
HORVU1Hr1G087900.1	Barley	cytosol	14.16	15.96
HORVU7Hr1G057310.5	Barley	cytosol, nucleus, plastid	8.02	15.72
HORVU2Hr1G113970.2	Barley	cytosol, nucleus	15.19	15.4
HORVU2Hr1G113930.2	Barley	nucleus	16.55	14.83
HORVU2Hr1G003340.5	Barley	nucleus	17.75	14.73
HORVU3Hr1G018800.2	Barley	cytosol, plastid	14.16	14.09
HORVU3Hr1G061010.4	Barley	nucleus	12.46	13.88
HORVU4Hr1G055690.5	Barley	peroxisome, plastid	8.02	13.35

Protein Annotations

EnsemblPlants:HORVU7Hr1G098540.1	EnsemblPlantsGene:HORVU7Hr1G098540	Gene3D:3.30.40.10	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR22937	PANTHER:PTHR22937:SF99	PFAM:PF13639	PFscan:PS50089	SEG:seg
SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI000296D703	UniProt:M0V7P2	MapMan:35.1	:

Description

No Description!

Coordinates

chrchr7H:-:598341043..598368078

Molecular Weight (calculated)

64422.6 Da

IEP (calculated)

8.259

GRAVY (calculated)

-0.902

Length

586 amino acids

Sequence
(BLAST)

001: MEENASRSTT TVGLLRRGSG VSLRNQSNEE RPNQFQNKPG NTTKLNPAKA TWAGNKEKPG YLRESFNSSG SKSVSASSSK AHVRKNYEEK LRRPLSAQFN
101: NAESSNRRTV VNRLQSSKKA IADEEDGHPC AQQVESEESS STSTTGDQPT GLDPEVLDSS VSSGSSPHAV DSAGRNTAPR TKPPRQKDKE EIFLGKTQTA
201: STSVHQPTGP RNLAIGVKSS NGAGPGVQRR GIKNLGCTSI SDVLQSGCSS SNSVSGKRTE IARKRISDGQ TSSRPSGLSG QSSLGHSPSL YPGITGPRVR
301: DSEQSASQQT TRTSNRTIRN SADSVRMRRP STQQARMRMP DETEQGVFAM RETVSGARQP DWARFSLDEV PPQRSARPFP MELPHAIYSS SRQGSSNRTS
401: RSRASSRPED SSSQMFRDVY RRMNMDGIAE VLLALERIEQ HDELSYEQLL VLETNLFLSG LGLNDQHRDM RMDIDDMSYE ELLQLEDRIG SVSTALSEEQ
501: LAKCLSRVVY KQANPGPEVS RPVVDDVKCS ICQEEYTEDE EVGRMKCEHQ YHVSCIQEWL RQKNWCPICK ASAVPSSPSD ADEGSA

Best Arabidopsis Sequence Match ( AT5G24870.3 )
(BLAST)

001: MDGFKGKRTS RPIMPRKASG LVLHENMKKK DDKSVVPICS RIGCSSRVSS TKGDLIDHKA KATVSSFRSP LSGKETVGSS SRSMSGFGGT KKASKVIGRR
101: QLSSLLDMDS SESSSVNEDS PTSERSLPRG KTKESTISVH SESSVSGEVV TEAGSSSRGT GRSIHQRPDL VSRDARVSNS EQNARASVNK NGLRDLRNKS
201: GSDVLPSNST PTRKSNIFRK KTSDGESSSS SRGNKTEGSV VGGKNISSPQ GNGITMSEPR RNRNLPSVRD NSVVSSSTRR STGYYGRTGR AGAVATLQAP
301: RPPTRADLNP SRSAEASRSP LNSYSRPISS NGRLRSLMMP GSPSEAGLSR SLMNRDTFRR YNMNGVAEVL LALERIEQDE ELTYEQLAVL ETNLFLNGMS
401: SFHDQHRDMR LDIDNMSYEE LLALEEKMGT VSTALSEEAL LKSLKSSIYR PNDESDDICL NKDDDVKCSI CQEEYVDGDE VGTLPCQHKY HVSCAQQWLR
501: MKNWCPICKT SAESQPHPFS

Arabidopsis Description

At5g24870 [Source:UniProtKB/TrEMBL;Acc:Q8L775]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.