Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G113970.2 | Barley | cytosol, nucleus | 88.38 | 100.0 |
| TraesCS2D01G516000.1 | Wheat | nucleus | 93.88 | 91.78 |
| TraesCS2A01G514400.3 | Wheat | nucleus | 93.12 | 91.03 |
| TraesCS2B01G542200.2 | Wheat | nucleus | 90.37 | 88.21 |
| Os04t0648800-01 | Rice | nucleus | 72.63 | 71.21 |
| EES11547 | Sorghum | nucleus | 69.11 | 68.48 |
| Zm00001d026445_P001 | Maize | nucleus | 68.04 | 67.94 |
| Zm00001d002080_P002 | Maize | nucleus | 68.04 | 67.12 |
| PGSC0003DMT400079217 | Potato | cytosol | 9.79 | 64.65 |
| Zm00001d026446_P001 | Maize | cytosol | 17.89 | 63.59 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 5.2 | 36.96 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 31.8 | 28.34 |
| Bra015221.1-P | Field mustard | nucleus | 25.54 | 27.97 |
| CDY62314 | Canola | nucleus | 23.7 | 26.18 |
| KRH50319 | Soybean | nucleus | 28.29 | 25.87 |
| CDY37230 | Canola | nucleus | 23.24 | 25.81 |
| Bra039842.1-P | Field mustard | nucleus | 23.39 | 25.63 |
| AT4G34040.1 | Thale cress | nucleus | 25.54 | 25.08 |
| KRH70661 | Soybean | mitochondrion, nucleus | 27.83 | 24.97 |
| Solyc10g050170.1.1 | Tomato | mitochondrion, nucleus | 27.68 | 24.93 |
| PGSC0003DMT400066252 | Potato | nucleus | 27.22 | 24.9 |
| Solyc01g107940.2.1 | Tomato | nucleus | 26.61 | 24.61 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 14.07 | 24.53 |
| Solyc01g107930.2.1 | Tomato | nucleus | 26.61 | 24.23 |
| HORVU2Hr1G003340.5 | Barley | nucleus | 25.99 | 24.08 |
| AT2G15530.4 | Thale cress | nucleus | 26.76 | 22.44 |
| HORVU5Hr1G080540.5 | Barley | nucleus | 5.5 | 20.93 |
| HORVU3Hr1G064370.1 | Barley | plastid | 12.23 | 20.78 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 15.75 | 19.58 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 15.75 | 19.18 |
| HORVU1Hr1G082970.1 | Barley | plastid | 10.86 | 18.83 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 7.49 | 18.49 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 14.07 | 17.69 |
| HORVU7Hr1G009940.2 | Barley | nucleus | 6.42 | 17.65 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 7.65 | 16.72 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 14.83 | 16.55 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 14.68 | 16.3 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 8.26 | 15.61 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 16.05 | 15.11 |
| HORVU4Hr1G055690.5 | Barley | peroxisome, plastid | 7.8 | 14.49 |
| HORVU3Hr1G054870.1 | Barley | cytosol, mitochondrion | 6.88 | 10.49 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G113930.2 | EnsemblPlantsGene:HORVU2Hr1G113930 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF464 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0002951829 | UniProt:M0Z561 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr2H:+:730544261..730547900
Molecular Weight (calculated)
71108.6 Da
IEP (calculated)
6.508
GRAVY (calculated)
-0.564
Length
654 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGQRNSVEQ LADVFGFDHG SGSGNPVMDQ QAYWNSMLGA AESQNLQGYE MNRGDGAIPY GGEGHQDGQF LGFWGSGEAS SSGNALNIGG GLRIGERRLG
101: AEHSLSLDNV DINLNASGHD LFGQSSNANA TSQASQQNAG CSRADTTAQA TELRLHPYRT FGLDDEQPEP FPSLNAFEHP LGNFSLMPED IDQRPGSSLD
201: GRRLACKRKN IEGVHGQFSA GASTSFSHRN DNAFHSVPSS SFNPAPGPNV SSHNFLLAPS SIEEQLPNYG TTTGMSSVSY NPPSGGNNSS GNSQRSFRAR
301: TTTAQQVSPY GVWPSSGSIR HPGSYYHQAP AFQSAFDELE AAMPVVSGIN LQYQHPGNVV PGIPQTAQRF AGRAAASSSR AGSLDNIILG REDVRNLVVP
401: SFPNAAPHSA LNMRHLVPEL SNWNPDIPGA TIPGNVSSVS RANATSTISR PAGSTSIAHQ NLHRRHPRNL SEEIGRLSGA LRSQQHPRLR SGFLLERQGD
501: GVWGVPLPMR NSREGRRLME IRNALEMIQR GENVRFEQSI FYGGVEIHDR HRDMRLDIDN MSYEELLALE ERIGNVSTGL TENDVMKLLK QRKFSSWRLS
601: SMEFEPCCIC QEDYVEGDDL GTLHCGHDFH ASCISQWLVV KNLCPICKST ALKT
101: AEHSLSLDNV DINLNASGHD LFGQSSNANA TSQASQQNAG CSRADTTAQA TELRLHPYRT FGLDDEQPEP FPSLNAFEHP LGNFSLMPED IDQRPGSSLD
201: GRRLACKRKN IEGVHGQFSA GASTSFSHRN DNAFHSVPSS SFNPAPGPNV SSHNFLLAPS SIEEQLPNYG TTTGMSSVSY NPPSGGNNSS GNSQRSFRAR
301: TTTAQQVSPY GVWPSSGSIR HPGSYYHQAP AFQSAFDELE AAMPVVSGIN LQYQHPGNVV PGIPQTAQRF AGRAAASSSR AGSLDNIILG REDVRNLVVP
401: SFPNAAPHSA LNMRHLVPEL SNWNPDIPGA TIPGNVSSVS RANATSTISR PAGSTSIAHQ NLHRRHPRNL SEEIGRLSGA LRSQQHPRLR SGFLLERQGD
501: GVWGVPLPMR NSREGRRLME IRNALEMIQR GENVRFEQSI FYGGVEIHDR HRDMRLDIDN MSYEELLALE ERIGNVSTGL TENDVMKLLK QRKFSSWRLS
601: SMEFEPCCIC QEDYVEGDDL GTLHCGHDFH ASCISQWLVV KNLCPICKST ALKT
001: MQGPRSTGDS STGINYADGE PICSTNSETT SNNILNPVDV QFPNNTTGSG RPTYASSSSH VVQNHNWWSF GESSSRLGPS DHLNSNGSKT DRQLLSDGYG
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST
Arabidopsis Description
MBR2E3 ubiquitin-protein ligase MBR2 [Source:UniProtKB/Swiss-Prot;Acc:O49500]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.