Factsheet for AT4G34040.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079217	Potato	cytosol	10.06	67.68
AT2G15530.4	Thale cress	nucleus	66.82	57.05
Zm00001d026446_P001	Maize	cytosol	12.61	45.65
VIT_03s0063g00160.t01	Wine grape	nucleus	42.79	38.83
KRH50319	Soybean	nucleus	37.39	34.83
KRH70661	Soybean	mitochondrion, nucleus	36.64	33.47
Solyc01g107940.2.1	Tomato	nucleus	30.93	29.14
AT5G42940.1	Thale cress	nucleus	29.58	28.51
GSMUA_Achr9P11290_001	Banana	nucleus	29.58	28.26
GSMUA_Achr8P15680_001	Banana	nucleus	30.48	28.19
AT1G45180.3	Thale cress	nucleus	27.18	28.06
PGSC0003DMT400066252	Potato	nucleus	29.88	27.83
Solyc10g050170.1.1	Tomato	mitochondrion, nucleus	30.33	27.82
Solyc01g107930.2.1	Tomato	nucleus	29.43	27.3
HORVU2Hr1G113970.2	Barley	cytosol, nucleus	23.42	26.99
EES11547	Sorghum	nucleus	26.73	26.97
Zm00001d002080_P002	Maize	nucleus	26.73	26.85
Os04t0648800-01	Rice	nucleus	26.73	26.69
TraesCS2B01G542200.2	Wheat	nucleus	26.43	26.27
Zm00001d026445_P001	Maize	nucleus	25.53	25.95
TraesCS2A01G514400.3	Wheat	nucleus	25.98	25.86
TraesCS2D01G516000.1	Wheat	nucleus	25.68	25.56
HORVU2Hr1G113930.2	Barley	nucleus	25.08	25.54
Zm00001d025027_P002	Maize	nucleus	25.83	24.71
Zm00001d004300_P003	Maize	nucleus	25.53	24.5
EES10483	Sorghum	nucleus	25.53	24.43
TraesCS2A01G022100.1	Wheat	nucleus	25.53	24.25
TraesCS2D01G022900.1	Wheat	nucleus	25.53	24.25
Os04t0185500-01	Rice	nucleus	25.68	24.12
TraesCS2B01G030700.1	Wheat	nucleus	25.38	24.11
HORVU2Hr1G003340.5	Barley	nucleus	25.23	23.8
AT4G00070.1	Thale cress	nucleus	6.31	23.46
AT1G73760.1	Thale cress	nucleus, plastid	12.61	22.89
AT3G47180.1	Thale cress	cytosol	7.06	22.38
AT5G24870.2	Thale cress	nucleus	17.12	21.92
AT1G17970.1	Thale cress	nucleus	11.26	20.38
AT5G10650.2	Thale cress	nucleus	15.47	19.62
AT5G52140.1	Thale cress	nucleus	7.96	18.93
AT3G63530.2	Thale cress	cytosol	6.91	18.55
AT1G53190.1	Thale cress	nucleus	13.36	18.02
AT3G15070.1	Thale cress	nucleus	12.91	17.7
AT1G36950.1	Thale cress	cytosol	5.86	17.26
AT4G31450.2	Thale cress	nucleus	12.76	17.1
AT2G37150.3	Thale cress	endoplasmic reticulum, extracellular	14.71	16.36
AT5G52150.1	Thale cress	cytosol, nucleus, peroxisome	4.8	16.0
AT5G52155.1	Thale cress	nucleus	4.2	15.38
AT3G19910.1	Thale cress	nucleus	7.21	14.12

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:829550	ProteinID:AEE86313.1	EMBL:AK229265	ArrayExpress:AT4G34040
EnsemblPlantsGene:AT4G34040	RefSeq:AT4G34040	TAIR:AT4G34040	RefSeq:AT4G34040-TAIR-G	EnsemblPlants:AT4G34040.1	TAIR:AT4G34040.1
Unigene:At.2085	EMBL:BT015366	EMBL:BT020341	ProteinID:CAA17568.1	ProteinID:CAB80121.1	GO:GO:0000003
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0007275
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009791	GO:GO:0009908	GO:GO:0009987
GO:GO:0010228	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0040007	GO:GO:0040008
GO:GO:0043161	GO:GO:0046872	GO:GO:0061630	InterPro:IPR001841	InterPro:IPR013083	RefSeq:NP_195130.1
UniProt:O49500	PFAM:PF13639	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50089
PANTHER:PTHR22937	PANTHER:PTHR22937:SF101	SMART:SM00184	SUPFAM:SSF57850	UniParc:UPI000009D5C4	InterPro:Znf_RING
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

MBR2E3 ubiquitin-protein ligase MBR2 [Source:UniProtKB/Swiss-Prot;Acc:O49500]

Coordinates

chr4:-:16304215..16308801

Molecular Weight (calculated)

71542.5 Da

IEP (calculated)

6.227

GRAVY (calculated)

-0.607

Length

666 amino acids

Sequence
(BLAST)

001: MQGPRSTGDS STGINYADGE PICSTNSETT SNNILNPVDV QFPNNTTGSG RPTYASSSSH VVQNHNWWSF GESSSRLGPS DHLNSNGSKT DRQLLSDGYG
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.