Factsheet for Zm00001d026446_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400079217	Potato	cytosol	37.5	69.7
Zm00001d015453_P001	Maize	cytosol	23.37	33.33
Zm00001d019616_P001	Maize	cytosol	22.83	32.56
Zm00001d013776_P001	Maize	cytosol	21.74	31.01
Zm00001d026445_P001	Maize	nucleus	76.63	21.53
Zm00001d021225_P002	Maize	cytosol	20.11	21.14
HORVU2Hr1G113970.2	Barley	cytosol, nucleus	63.59	20.24
Zm00001d002080_P002	Maize	nucleus	72.28	20.06
EES11547	Sorghum	nucleus	71.2	19.85
Os04t0648800-01	Rice	nucleus	65.76	18.14
TraesCS2D01G516000.1	Wheat	nucleus	65.76	18.09
TraesCS2A01G514400.3	Wheat	nucleus	65.76	18.09
HORVU2Hr1G113930.2	Barley	nucleus	63.59	17.89
TraesCS2B01G542200.2	Wheat	nucleus	64.13	17.61
Zm00001d048301_P001	Maize	cytosol	22.83	17.43
Zm00001d026248_P001	Maize	nucleus	35.33	17.11
Zm00001d011636_P001	Maize	nucleus	29.89	16.27
Zm00001d024406_P002	Maize	nucleus	31.52	16.2
Zm00001d043784_P002	Maize	nucleus	29.89	15.9
Zm00001d002416_P002	Maize	endoplasmic reticulum, extracellular, vacuole	33.15	15.37
Zm00001d038909_P001	Maize	cytosol, mitochondrion	31.52	15.1
Zm00001d015323_P002	Maize	cytosol	9.24	15.04
Zm00001d027868_P004	Maize	cytosol	21.74	14.81
Zm00001d045517_P001	Maize	mitochondrion, nucleus	20.11	13.81
CDY37230	Canola	nucleus	42.93	13.41
CDY62314	Canola	nucleus	42.93	13.34
Zm00001d053212_P002	Maize	cytosol, mitochondrion, nucleus, plastid	20.65	13.24
Bra039842.1-P	Field mustard	nucleus	42.93	13.23
Bra015221.1-P	Field mustard	nucleus	42.93	13.23
AT4G34040.1	Thale cress	nucleus	45.65	12.61
Zm00001d011541_P004	Maize	nucleus	35.87	12.45
Solyc10g050170.1.1	Tomato	mitochondrion, nucleus	48.91	12.4
Zm00001d008649_P003	Maize	cytosol	35.33	12.33
PGSC0003DMT400066252	Potato	nucleus	47.83	12.31
Zm00001d009571_P002	Maize	nucleus	34.24	12.3
Zm00001d025027_P002	Maize	nucleus	46.2	12.21
Solyc01g107940.2.1	Tomato	nucleus	45.65	11.88
VIT_03s0063g00160.t01	Wine grape	nucleus	47.28	11.85
Zm00001d039769_P002	Maize	cytosol	35.33	11.8
KRH50319	Soybean	nucleus	45.65	11.75
Solyc01g107930.2.1	Tomato	nucleus	45.65	11.7
Zm00001d002624_P003	Maize	cytosol	21.2	11.61
Zm00001d004300_P003	Maize	nucleus	43.48	11.53
Zm00001d015289_P001	Maize	nucleus	35.33	11.48
KRH70661	Soybean	mitochondrion, nucleus	43.48	10.97
Zm00001d014609_P002	Maize	nucleus	34.24	10.77
Zm00001d006226_P001	Maize	peroxisome	18.48	10.69
Zm00001d021314_P005	Maize	cytosol, mitochondrion, nucleus	18.48	10.56
AT2G15530.4	Thale cress	nucleus	44.57	10.51
Zm00001d039015_P002	Maize	cytosol	11.96	5.38
Zm00001d037536_P006	Maize	mitochondrion, plastid	17.93	5.37

Protein Annotations

EnsemblPlants:Zm00001d026446_P001	EnsemblPlants:Zm00001d026446_T001	EnsemblPlantsGene:Zm00001d026446	Gene3D:3.30.40.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0016874	InterPro:IPR001841	InterPro:IPR013083	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR14155
PANTHER:PTHR14155:SF464	PFAM:PF13639	PFscan:PS50089	ProteinID:AQK46662.1	SMART:SM00184	SUPFAM:SSF57850
UniParc:UPI0008458A19	UniProt:A0A1D6JG00	MapMan:35.1	:	:	:

Description

E3 ubiquitin-protein ligase MBR2

Coordinates

chr10:+:145978827..145981979

Molecular Weight (calculated)

20684.1 Da

IEP (calculated)

7.312

GRAVY (calculated)

-0.279

Length

184 amino acids

Sequence
(BLAST)

001: MKTAKAQITI DPWTPAVNAK GCLQKGWFRI SGIPMEQRSL VTIAKVGGLV GKVIEIDERT RLRNEYSIFY GGVDIHDRHR DMRLDIDNMS YEELLALEER
101: IGNVGTGLSE EAVIRLLKQR KFSSWTLKAS LDPEPCCICQ EEYADGDDLG KLDCGHDFHA GCIKQWLVVK NVCPICKSTA LKKT

Best Arabidopsis Sequence Match ( AT2G15530.5 )
(BLAST)

001: MNPMQGPRSI GGSSTEVNQV DGESIYCTET SLNTMLNPAD TGFPNNSTPS GRPTYASSSS HAAQDHTWWR FGESSSIPGP SDQVNSIGIK TSHQLPQDGT
101: HHFVGYGSEG RQTGLNGMMV DGGVHAGSHI RNVPSFLRGS SSNPMPQHVD MSMDMDSDNC NAQTSGVVIR HNSYGSSLGS SVQAAGESSS GPASPFGGWG
201: SSCKRKALEG SPSHYFSGET PNRIVQTENS ASHASLSQYG ASSSLSLATP SQSSPNVTNH FGRTEQMFGS GGGRAVAASA FHSTRNTDTL SRAGRRLNPR
301: QPQESVAFSV SHGGTSVRPT GSLQQNLPLN SPFVDPPDVR SSSITSGSNT GENQTNIVHL PALTRNIHQY AWDASFSSRA SNPSGIGMPA ERLGPQWETP
401: RSNQEQPLFA PATDMRQPVH DLWNFARGSP GSSVDSLFVP RAGPSSAIHT PQPNPTWIPP QNAPPHNPSR TSELSPWSLF PSIESPSASH GGPLPLLPAG
501: PSVSSNEVTM PSSSNSRSHR SRHRRSGLLL ERQNELLHLR HIGRSLAADG NGRNQIISEI RQVLHAMRRG ENLRVEDYMV FDPLIYQGMT DMHDRHREMR
601: LDVDNMSYEE LLALGERIGD VSTGLSEEVI LKAMKQHKHT SSSPSSVELH QNIEPCCICQ EEYVEGDNLG TLKCGHEFHK DCIKQWVMIK NLCPICKTEA
701: LKTP

Arabidopsis Description

RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.