Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH70661 | Soybean | mitochondrion, nucleus | 93.99 | 92.18 |
| PGSC0003DMT400079217 | Potato | cytosol | 9.65 | 69.7 |
| KRH05664 | Soybean | nucleus | 11.33 | 66.94 |
| GSMUA_Achr4P06090_001 | Banana | cytosol | 12.03 | 58.5 |
| VIT_03s0063g00160.t01 | Wine grape | nucleus | 48.25 | 47.0 |
| Zm00001d026446_P001 | Maize | cytosol | 11.75 | 45.65 |
| Bra015221.1-P | Field mustard | nucleus | 33.57 | 40.2 |
| CDY62314 | Canola | nucleus | 32.03 | 38.68 |
| CDY37230 | Canola | nucleus | 31.75 | 38.54 |
| Bra039842.1-P | Field mustard | nucleus | 31.89 | 38.19 |
| AT4G34040.1 | Thale cress | nucleus | 34.83 | 37.39 |
| KRH61306 | Soybean | nucleus | 32.87 | 35.93 |
| KRH52013 | Soybean | nucleus | 34.83 | 35.17 |
| PGSC0003DMT400066252 | Potato | nucleus | 34.69 | 34.69 |
| Solyc01g107940.2.1 | Tomato | nucleus | 34.27 | 34.65 |
| Solyc10g050170.1.1 | Tomato | mitochondrion, nucleus | 35.1 | 34.57 |
| KRH61311 | Soybean | nucleus | 34.97 | 34.06 |
| Solyc01g107930.2.1 | Tomato | nucleus | 33.99 | 33.84 |
| AT2G15530.4 | Thale cress | nucleus | 34.55 | 31.67 |
| EES11547 | Sorghum | nucleus | 27.13 | 29.39 |
| Zm00001d002080_P002 | Maize | nucleus | 27.13 | 29.26 |
| GSMUA_Achr4P12850_001 | Banana | nucleus | 18.6 | 29.17 |
| HORVU2Hr1G113970.2 | Barley | cytosol, nucleus | 23.5 | 29.07 |
| Zm00001d026445_P001 | Maize | nucleus | 26.29 | 28.7 |
| TraesCS2B01G542200.2 | Wheat | nucleus | 26.57 | 28.36 |
| HORVU2Hr1G113930.2 | Barley | nucleus | 25.87 | 28.29 |
| Os04t0648800-01 | Rice | nucleus | 26.29 | 28.19 |
| TraesCS2D01G516000.1 | Wheat | nucleus | 26.15 | 27.95 |
| TraesCS2A01G514400.3 | Wheat | nucleus | 26.15 | 27.95 |
| GSMUA_Achr9P22530_001 | Banana | nucleus | 24.62 | 27.33 |
| KRH53246 | Soybean | nucleus | 6.99 | 27.32 |
| KRH64669 | Soybean | nucleus | 7.27 | 25.74 |
| KRH05663 | Soybean | cytosol | 20.7 | 25.47 |
| EES10483 | Sorghum | nucleus | 24.62 | 25.29 |
| Zm00001d004300_P003 | Maize | nucleus | 23.92 | 24.64 |
| Os04t0185500-01 | Rice | nucleus | 23.92 | 24.12 |
| KRH41763 | Soybean | nucleus | 12.45 | 23.61 |
| Zm00001d025027_P002 | Maize | nucleus | 22.94 | 23.56 |
| HORVU2Hr1G003340.5 | Barley | nucleus | 22.94 | 23.23 |
| KRH17980 | Soybean | nucleus | 6.57 | 23.15 |
| TraesCS2D01G022900.1 | Wheat | nucleus | 22.66 | 23.11 |
| TraesCS2A01G022100.1 | Wheat | nucleus | 22.66 | 23.11 |
| KRH16134 | Soybean | nucleus | 17.9 | 23.06 |
| KRH32434 | Soybean | nucleus | 17.34 | 23.01 |
| TraesCS2B01G030700.1 | Wheat | nucleus | 22.52 | 22.97 |
| KRH04957 | Soybean | nucleus | 17.06 | 22.93 |
| KRH48568 | Soybean | nucleus | 11.05 | 22.32 |
| KRH19845 | Soybean | nucleus | 16.92 | 22.0 |
| KRH67668 | Soybean | nucleus | 16.92 | 21.96 |
| KRH16389 | Soybean | nucleus | 6.29 | 21.95 |
| KRH39137 | Soybean | nucleus | 11.33 | 21.95 |
| KRG95955 | Soybean | nucleus | 16.78 | 21.86 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 7.41 | 21.46 |
| KRH30071 | Soybean | cytosol | 10.21 | 21.22 |
| KRH52597 | Soybean | nucleus | 15.8 | 20.89 |
| KRH60461 | Soybean | nucleus | 12.45 | 20.65 |
| KRH20832 | Soybean | nucleus | 7.13 | 20.65 |
| KRH29702 | Soybean | nucleus | 6.99 | 20.16 |
| KRH55161 | Soybean | nucleus | 12.87 | 20.09 |
| KRH55165 | Soybean | nucleus | 8.67 | 19.94 |
| KRH26195 | Soybean | nucleus | 12.73 | 19.87 |
| KRH24699 | Soybean | nucleus | 6.71 | 19.35 |
| KRH22017 | Soybean | nucleus | 14.27 | 19.32 |
| KRG90628 | Soybean | nucleus | 8.53 | 18.21 |
| KRH61936 | Soybean | nucleus | 13.99 | 17.95 |
| KRH55090 | Soybean | nucleus | 9.23 | 17.74 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 8.53 | 17.18 |
| KRH04591 | Soybean | nucleus | 7.27 | 15.43 |
| KRH04592 | Soybean | nucleus | 7.13 | 15.27 |
Protein Annotations
| EMBL:ACUP02004680 | EnsemblPlants:KRH50319 | EnsemblPlantsGene:GLYMA_07G214600 | EntrezGene:100809024 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF101 | PFAM:PF13639 |
| PFscan:PS50089 | ProteinID:KRH50319 | ProteinID:KRH50319.1 | ProteinID:KRH50320.1 | SEG:seg | SMART:SM00184 |
| SUPFAM:SSF57850 | UniParc:UPI000233863B | UniProt:I1KM15 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr7:-:38661924..38670366
Molecular Weight (calculated)
77625.7 Da
IEP (calculated)
6.421
GRAVY (calculated)
-0.589
Length
715 amino acids
Sequence
(BLAST)
(BLAST)
001: MQGQRRTIGS FPAIVSMMQG PSSSGTDMSH QSSLNHVQNA VDFRLSDYRG SSGETACLRG TGHNVQSFNG WSTGESSSRL NLINQVNDEG LKSEHGLSSS
101: YNAATEDGLR SEERQFEPNN VIFPVSSNTN LHGNQSRVHP SFLQGSSSTR ISQNISLDMG HVTNAADRGK GKEAGSSVNA NNTSGIDREK TLFGSASCNH
201: IGASSESSGY MAQGDSANSS SSLVNWGPSC KRKALEGSSR QLCSGGSSST LVQSGNGCWP IDPVDLNASS SLSDSTPIED IPVTSPPLFQ NARNEVRQEA
301: SNAFPLISIA ENVERPLRNF DRRMGHLQHQ ESVPLNLPST GSARHHNHSS LHQIPGSHSI NDSLELRLTA GVSSANSGAS LNQSPALRIH SFPWNRTANR
401: RGARSSTSYN SGERAVWEDF NLRMFPRDST EHPMNVPASS GHEPTGWHTP SGNVNNSGGV PPPSWIGSSS NVHSPPNPSW IFNHEVPAEN MQSVSEFSPW
501: SLFPSISSAS GVHNGHSAPS SSGPPSFTQG SSSNQPYART ALLMERRGGD VLSGPHSLRA LTFDNEGRRR LISEIRQVLM AMRRGENLRA EDYMLFDPFL
601: YHGMAEMHDR HREMRLDVDN MSYEELLALE ERIGDVSTGL SEDIIIKLMK QRIYVSVMTD SSIDLEPCCI CQDEFADGEN VGSLDCGHEF HSGCIKQWLM
701: QKNLCPICKT TALAT
101: YNAATEDGLR SEERQFEPNN VIFPVSSNTN LHGNQSRVHP SFLQGSSSTR ISQNISLDMG HVTNAADRGK GKEAGSSVNA NNTSGIDREK TLFGSASCNH
201: IGASSESSGY MAQGDSANSS SSLVNWGPSC KRKALEGSSR QLCSGGSSST LVQSGNGCWP IDPVDLNASS SLSDSTPIED IPVTSPPLFQ NARNEVRQEA
301: SNAFPLISIA ENVERPLRNF DRRMGHLQHQ ESVPLNLPST GSARHHNHSS LHQIPGSHSI NDSLELRLTA GVSSANSGAS LNQSPALRIH SFPWNRTANR
401: RGARSSTSYN SGERAVWEDF NLRMFPRDST EHPMNVPASS GHEPTGWHTP SGNVNNSGGV PPPSWIGSSS NVHSPPNPSW IFNHEVPAEN MQSVSEFSPW
501: SLFPSISSAS GVHNGHSAPS SSGPPSFTQG SSSNQPYART ALLMERRGGD VLSGPHSLRA LTFDNEGRRR LISEIRQVLM AMRRGENLRA EDYMLFDPFL
601: YHGMAEMHDR HREMRLDVDN MSYEELLALE ERIGDVSTGL SEDIIIKLMK QRIYVSVMTD SSIDLEPCCI CQDEFADGEN VGSLDCGHEF HSGCIKQWLM
701: QKNLCPICKT TALAT
001: MNPMQGPRSI GGSSTEVNQV DGESIYCTET SLNTMLNPAD TGFPNNSTPS GRPTYASSSS HAAQDHTWWR FGESSSIPGP SDQVNSIGIK TSHQLPQDGT
101: HHFVGYGSEG RQTGLNGMMV DGGVHAGSHI RNVPSFLRGS SSNPMPQHVD MSMDMDSDNC NAQTSGVVIR HNSYGSSLGS SVQAAGESSS GPASPFGGWG
201: SSCKRKALEG SPSHYFSGET PNRIVQTENS ASHASLSQYG ASSSLSLATP SQSSPNVTNH FGRTEQMFGS GGGRAVAASA FHSTRNTDTL SRAGRRLNPR
301: QPQESVAFSV SHGGTSVRPT GSLQQNLPLN SPFVDPPDVR SSSITSGSNT GENQTNIVHL PALTRNIHQY AWDASFSSRA SNPSGIGMPA ERLGPQWETP
401: RSNQEQPLFA PATDMRQPVH DLWNFARGSP GSSVDSLFVP RAGPSSAIHT PQPNPTWIPP QNAPPHNPSR TSELSPWSLF PSIESPSASH GGPLPLLPAG
501: PSVSSNEVTM PSSSNSRSHR SRHRRSGLLL ERQNELLHLR HIGRSLAADG NGRNQIISEI RQVLHAMRRG ENLRVEDYMV FDPLIYQGMT DMHDRHREMR
601: LDVDNMSYEE LLALGERIGD VSTGLSEEVI LKAMKQHKHT SSSPSSVELH QNIEPCCICQ EEYVEGDNLG TLKCGHEFHK DCIKQWVMIK NLCPICKTEA
701: LKTP
101: HHFVGYGSEG RQTGLNGMMV DGGVHAGSHI RNVPSFLRGS SSNPMPQHVD MSMDMDSDNC NAQTSGVVIR HNSYGSSLGS SVQAAGESSS GPASPFGGWG
201: SSCKRKALEG SPSHYFSGET PNRIVQTENS ASHASLSQYG ASSSLSLATP SQSSPNVTNH FGRTEQMFGS GGGRAVAASA FHSTRNTDTL SRAGRRLNPR
301: QPQESVAFSV SHGGTSVRPT GSLQQNLPLN SPFVDPPDVR SSSITSGSNT GENQTNIVHL PALTRNIHQY AWDASFSSRA SNPSGIGMPA ERLGPQWETP
401: RSNQEQPLFA PATDMRQPVH DLWNFARGSP GSSVDSLFVP RAGPSSAIHT PQPNPTWIPP QNAPPHNPSR TSELSPWSLF PSIESPSASH GGPLPLLPAG
501: PSVSSNEVTM PSSSNSRSHR SRHRRSGLLL ERQNELLHLR HIGRSLAADG NGRNQIISEI RQVLHAMRRG ENLRVEDYMV FDPLIYQGMT DMHDRHREMR
601: LDVDNMSYEE LLALGERIGD VSTGLSEEVI LKAMKQHKHT SSSPSSVELH QNIEPCCICQ EEYVEGDNLG TLKCGHEFHK DCIKQWVMIK NLCPICKTEA
701: LKTP
Arabidopsis Description
RING/U-box superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IIG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.