Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH60461 | Soybean | nucleus | 93.9 | 82.13 |
| KRH48568 | Soybean | nucleus | 64.72 | 68.93 |
| KRH39137 | Soybean | nucleus | 63.93 | 65.31 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 56.76 | 57.68 |
| Solyc03g118840.2.1 | Tomato | nucleus | 47.75 | 46.51 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 24.67 | 46.5 |
| PGSC0003DMT400014732 | Potato | nucleus | 47.75 | 46.39 |
| KRH05664 | Soybean | nucleus | 14.59 | 45.45 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 43.5 | 44.69 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 39.52 | 43.95 |
| CDX73013 | Canola | plastid | 41.38 | 43.94 |
| CDX68213 | Canola | nucleus, plastid | 40.32 | 43.55 |
| Bra015967.1-P | Field mustard | nucleus | 40.85 | 43.14 |
| CDY60141 | Canola | plastid | 40.85 | 43.14 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 38.73 | 42.32 |
| CDX83878 | Canola | nucleus | 40.05 | 42.3 |
| CDY11092 | Canola | cytosol, plastid | 38.99 | 42.24 |
| CDX96741 | Canola | nucleus | 40.32 | 41.76 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 37.93 | 41.69 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 33.69 | 41.64 |
| Bra016574.1-P | Field mustard | nucleus | 39.26 | 41.34 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 37.14 | 39.89 |
| OQU87370 | Sorghum | nucleus | 36.34 | 39.26 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 34.75 | 39.22 |
| Zm00001d011636_P001 | Maize | nucleus | 35.01 | 39.05 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 22.55 | 38.64 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 34.75 | 38.53 |
| AT1G17970.1 | Thale cress | nucleus | 37.4 | 38.32 |
| Zm00001d043784_P002 | Maize | nucleus | 34.48 | 37.57 |
| HORVU3Hr1G064370.1 | Barley | plastid | 37.67 | 36.88 |
| PGSC0003DMT400078539 | Potato | plastid | 23.87 | 36.14 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 35.28 | 35.0 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 31.57 | 34.1 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 31.83 | 33.33 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 30.77 | 33.33 |
| Os05t0550000-00 | Rice | nucleus | 32.1 | 33.24 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 30.5 | 33.24 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 30.5 | 30.59 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 30.24 | 29.69 |
| HORVU1Hr1G082970.1 | Barley | plastid | 28.65 | 28.65 |
| AT4G00070.1 | Thale cress | nucleus | 12.73 | 26.82 |
| KRH53246 | Soybean | nucleus | 11.41 | 23.5 |
| KRH17980 | Soybean | nucleus | 11.94 | 22.17 |
| KRH16389 | Soybean | nucleus | 11.94 | 21.95 |
| KRH64669 | Soybean | nucleus | 11.41 | 21.29 |
| KRH29702 | Soybean | nucleus | 11.67 | 17.74 |
| KRH24699 | Soybean | nucleus | 11.67 | 17.74 |
| KRH52597 | Soybean | nucleus | 25.2 | 17.56 |
| KRH04957 | Soybean | nucleus | 24.14 | 17.11 |
| AT1G36950.1 | Thale cress | cytosol | 9.81 | 16.37 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 10.61 | 16.19 |
| KRH16134 | Soybean | nucleus | 23.34 | 15.86 |
| KRH30071 | Soybean | cytosol | 13.79 | 15.12 |
| KRH55165 | Soybean | nucleus | 12.47 | 15.11 |
| KRH20832 | Soybean | nucleus | 9.81 | 14.98 |
| KRG90628 | Soybean | nucleus | 13.26 | 14.93 |
| KRH19845 | Soybean | nucleus | 21.75 | 14.91 |
| KRH61936 | Soybean | nucleus | 21.22 | 14.36 |
| KRH32434 | Soybean | nucleus | 20.42 | 14.29 |
| KRG95955 | Soybean | nucleus | 20.69 | 14.21 |
| KRH67668 | Soybean | nucleus | 20.42 | 13.97 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 13.0 | 13.8 |
| KRH55161 | Soybean | nucleus | 16.45 | 13.54 |
| KRH55090 | Soybean | nucleus | 12.73 | 12.9 |
| KRH26195 | Soybean | nucleus | 15.65 | 12.88 |
| KRH50319 | Soybean | nucleus | 23.61 | 12.45 |
| KRH70661 | Soybean | mitochondrion, nucleus | 23.34 | 12.07 |
| KRH61306 | Soybean | nucleus | 20.69 | 11.93 |
| KRH04591 | Soybean | nucleus | 10.34 | 11.57 |
| KRH52013 | Soybean | nucleus | 21.49 | 11.44 |
| KRH04592 | Soybean | nucleus | 10.08 | 11.38 |
| KRH61311 | Soybean | nucleus | 22.02 | 11.31 |
| KRH22017 | Soybean | nucleus | 15.65 | 11.17 |
| KRH05663 | Soybean | cytosol | 9.81 | 6.37 |
Protein Annotations
| EMBL:ACUP02004779 | EnsemblPlants:KRH41763 | EnsemblPlantsGene:GLYMA_08G049400 | EntrezGene:100819907 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF96 | PFAM:PF13639 |
| PFscan:PS50089 | ProteinID:KRH41763 | ProteinID:KRH41763.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 |
| UniParc:UPI00023380D6 | UniProt:I1KQF3 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:3853925..3858663
Molecular Weight (calculated)
42213.2 Da
IEP (calculated)
8.616
GRAVY (calculated)
-0.744
Length
377 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVTNTTTPT VAEHIKWRRP RNQFNHHQHP ISETDPNPQI PSIIQSTRCK STISSLLLST FSNNTSSNND TPTTFNATAH SKKKSNFSAS TFRGLGCTAG
101: ASQQVSVPAV IRSSADWQGK KTRKKKHKRS SSSSKNKTFH GGVLEGSNPE CVDFQDVWCG PGIGFSTDAA AAASVDCVVA RKNVSSARGK IDVDKITHRE
201: RSSYVGRRTE TFTFLDSTDP DIFTPRSASD SYGTATYYRH VRDPSSDGFA EIMMLQGSLL MGGQLNSHDH FKDWRLDVDN MSYEQLLELG ERIGHVNTGL
301: KEDEMGRNIR KTRLQFWDDT SKHQVDKECS ICQEEYEAGN ELGRLNCEHI YHFQCIKQWA AQKNFCPVCK QQVAARH
101: ASQQVSVPAV IRSSADWQGK KTRKKKHKRS SSSSKNKTFH GGVLEGSNPE CVDFQDVWCG PGIGFSTDAA AAASVDCVVA RKNVSSARGK IDVDKITHRE
201: RSSYVGRRTE TFTFLDSTDP DIFTPRSASD SYGTATYYRH VRDPSSDGFA EIMMLQGSLL MGGQLNSHDH FKDWRLDVDN MSYEQLLELG ERIGHVNTGL
301: KEDEMGRNIR KTRLQFWDDT SKHQVDKECS ICQEEYEAGN ELGRLNCEHI YHFQCIKQWA AQKNFCPVCK QQVAARH
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.