Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 1
- plastid 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G260700.1 | Wheat | nucleus | 50.13 | 96.5 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 83.64 | 93.88 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 83.9 | 93.62 |
| OQU87370 | Sorghum | nucleus | 74.03 | 81.66 |
| Zm00001d011636_P001 | Maize | nucleus | 70.39 | 80.18 |
| Zm00001d043784_P002 | Maize | nucleus | 70.65 | 78.61 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 51.95 | 59.88 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 50.39 | 57.06 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 50.39 | 51.05 |
| HORVU1Hr1G082970.1 | Barley | plastid | 45.45 | 46.42 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 41.04 | 43.89 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 41.04 | 42.59 |
| KRH48568 | Soybean | nucleus | 35.58 | 38.7 |
| KRH41763 | Soybean | nucleus | 36.88 | 37.67 |
| Solyc03g118840.2.1 | Tomato | nucleus | 37.66 | 37.47 |
| KRH39137 | Soybean | nucleus | 35.84 | 37.4 |
| PGSC0003DMT400014732 | Potato | nucleus | 37.4 | 37.11 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 32.99 | 36.18 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 28.05 | 35.41 |
| PGSC0003DMT400078539 | Potato | plastid | 22.6 | 34.94 |
| KRH60461 | Soybean | nucleus | 38.7 | 34.57 |
| CDX73013 | Canola | plastid | 30.65 | 33.24 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 29.09 | 33.04 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 31.43 | 32.97 |
| Bra015967.1-P | Field mustard | nucleus | 30.39 | 32.77 |
| CDY60141 | Canola | plastid | 30.39 | 32.77 |
| CDX83878 | Canola | nucleus | 29.87 | 32.21 |
| CDX96741 | Canola | nucleus | 30.13 | 31.87 |
| Bra016574.1-P | Field mustard | nucleus | 29.61 | 31.84 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 7.53 | 31.52 |
| CDX68213 | Canola | nucleus, plastid | 28.57 | 31.52 |
| CDY11092 | Canola | cytosol, plastid | 28.31 | 31.32 |
| AT1G17970.1 | Thale cress | nucleus | 27.53 | 28.8 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 16.36 | 28.64 |
| AT4G00070.1 | Thale cress | nucleus | 11.69 | 25.14 |
| HORVU5Hr1G080540.5 | Barley | nucleus | 9.87 | 22.09 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 20.26 | 20.8 |
| HORVU7Hr1G009940.2 | Barley | nucleus | 11.69 | 18.91 |
| AT1G36950.1 | Thale cress | cytosol | 10.65 | 18.14 |
| HORVU2Hr1G094980.4 | Barley | cytosol | 11.95 | 17.36 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 12.47 | 16.05 |
| HORVU4Hr1G055690.5 | Barley | peroxisome, plastid | 13.25 | 14.49 |
| HORVU1Hr1G087900.1 | Barley | cytosol | 19.48 | 14.42 |
| HORVU3Hr1G061010.4 | Barley | nucleus | 19.48 | 14.26 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 12.73 | 14.16 |
| HORVU1Hr1G024190.2 | Barley | nucleus | 19.22 | 13.78 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 20.52 | 13.48 |
| HORVU2Hr1G113970.2 | Barley | cytosol, nucleus | 20.0 | 13.32 |
| HORVU3Hr1G018800.2 | Barley | cytosol, plastid | 19.74 | 12.9 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 22.86 | 12.66 |
| HORVU2Hr1G113930.2 | Barley | nucleus | 20.78 | 12.23 |
| HORVU2Hr1G003340.5 | Barley | nucleus | 21.3 | 11.61 |
| HORVU3Hr1G054870.1 | Barley | cytosol, mitochondrion | 7.53 | 6.76 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G064370.1 | EnsemblPlantsGene:HORVU3Hr1G064370 | Gene3D:3.30.40.10 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF63 | PFAM:PF13639 | PFscan:PS50089 | SEG:seg |
| SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI000B48755A | UniProt:A0A287LCT8 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr3H:+:491370347..491374100
Molecular Weight (calculated)
41589.6 Da
IEP (calculated)
9.798
GRAVY (calculated)
-0.570
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: RTLDNKREPA PLCSARSQAL LSSSAITAPT RLAGPEHASG AGLPVMAGDR RGGSPTAERR RGIRRLLLPR GEASSAPLPP PAAAEAGRRK GFASAALRGL
101: GCTSAAASQA YAPGAGSAAA AAVRSSADWH GRRRKGKDRR KERGAGAGGG GLVGGGIGGD VWCAPGIPFA AEASSVDCVV ARHQMLGRGR GGDPERPHRE
201: RPCLSRRTSM QEQISSSFME SPPPPPLPQH MDGPFFGADL LPSARLRRMR GYRPSPGGLE EEIMMFQTRV LLGGMNMYDR YQDWRLDVDN MTYEELLELG
301: ERIGHVNTGL REDEITRNLR KVKPDSSFRF PTEVEKKCSI CQEEFEANDE MGRLGCGHSY HVYCIKQWLS QKNVCPVCKT AVTKT
101: GCTSAAASQA YAPGAGSAAA AAVRSSADWH GRRRKGKDRR KERGAGAGGG GLVGGGIGGD VWCAPGIPFA AEASSVDCVV ARHQMLGRGR GGDPERPHRE
201: RPCLSRRTSM QEQISSSFME SPPPPPLPQH MDGPFFGADL LPSARLRRMR GYRPSPGGLE EEIMMFQTRV LLGGMNMYDR YQDWRLDVDN MTYEELLELG
301: ERIGHVNTGL REDEITRNLR KVKPDSSFRF PTEVEKKCSI CQEEFEANDE MGRLGCGHSY HVYCIKQWLS QKNVCPVCKT AVTKT
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.