Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 5
- cytosol 1
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY60141 | Canola | plastid | 70.84 | 72.83 |
| Bra015967.1-P | Field mustard | nucleus | 70.84 | 72.83 |
| CDX73013 | Canola | plastid | 69.75 | 72.11 |
| Bra003830.1-P | Field mustard | nucleus, plastid | 63.49 | 68.73 |
| CDX68213 | Canola | nucleus, plastid | 64.85 | 68.19 |
| CDY11092 | Canola | cytosol, plastid | 63.76 | 67.24 |
| AT1G17970.1 | Thale cress | nucleus | 56.95 | 56.79 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 44.14 | 43.67 |
| KRH41763 | Soybean | nucleus | 44.69 | 43.5 |
| KRH48568 | Soybean | nucleus | 41.14 | 42.66 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 23.16 | 42.5 |
| Solyc03g118840.2.1 | Tomato | nucleus | 43.32 | 41.09 |
| KRH39137 | Soybean | nucleus | 40.87 | 40.65 |
| PGSC0003DMT400014732 | Potato | nucleus | 42.78 | 40.46 |
| KRH60461 | Soybean | nucleus | 44.69 | 38.05 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 33.79 | 36.15 |
| PGSC0003DMT400078539 | Potato | plastid | 24.52 | 36.14 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 33.79 | 35.94 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 32.43 | 35.63 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 32.7 | 34.19 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 28.34 | 34.1 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 31.34 | 33.82 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 20.16 | 33.64 |
| OQU87370 | Sorghum | nucleus | 31.34 | 32.95 |
| Zm00001d011636_P001 | Maize | nucleus | 29.97 | 32.54 |
| Zm00001d043784_P002 | Maize | nucleus | 30.25 | 32.08 |
| HORVU3Hr1G064370.1 | Barley | plastid | 32.97 | 31.43 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 30.79 | 31.39 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 32.15 | 31.05 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 28.07 | 29.6 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 27.79 | 29.48 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 27.52 | 28.94 |
| Os05t0550000-00 | Rice | nucleus | 28.07 | 28.3 |
| AT4G00070.1 | Thale cress | nucleus | 13.62 | 27.93 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 27.52 | 26.86 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 27.79 | 26.56 |
| HORVU1Hr1G082970.1 | Barley | plastid | 25.61 | 24.93 |
| AT5G52155.1 | Thale cress | nucleus | 9.54 | 19.23 |
| AT1G36950.1 | Thale cress | cytosol | 11.72 | 19.03 |
| AT3G47180.1 | Thale cress | cytosol | 9.81 | 17.14 |
| AT3G63530.2 | Thale cress | cytosol | 11.44 | 16.94 |
| AT5G52150.1 | Thale cress | cytosol, nucleus, peroxisome | 8.99 | 16.5 |
| AT5G10650.2 | Thale cress | nucleus | 23.43 | 16.38 |
| AT5G24870.2 | Thale cress | nucleus | 22.89 | 16.15 |
| AT5G52140.1 | Thale cress | nucleus | 11.99 | 15.71 |
| AT3G15070.1 | Thale cress | nucleus | 16.89 | 12.76 |
| AT4G31450.2 | Thale cress | nucleus | 17.17 | 12.68 |
| AT4G34040.1 | Thale cress | nucleus | 22.89 | 12.61 |
| AT1G45180.3 | Thale cress | nucleus | 21.53 | 12.25 |
| AT1G53190.1 | Thale cress | nucleus | 16.35 | 12.15 |
| AT2G37150.3 | Thale cress | endoplasmic reticulum, extracellular | 19.62 | 12.02 |
| AT5G42940.1 | Thale cress | nucleus | 21.8 | 11.58 |
| AT3G19910.1 | Thale cress | nucleus | 10.35 | 11.18 |
| AT2G15530.4 | Thale cress | nucleus | 21.8 | 10.26 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | EntrezGene:843711 | ProteinID:AAG52076.1 | ProteinID:AEE35505.1 | ArrayExpress:AT1G73760 |
| EnsemblPlantsGene:AT1G73760 | RefSeq:AT1G73760 | TAIR:AT1G73760 | RefSeq:AT1G73760-TAIR-G | EnsemblPlants:AT1G73760.1 | TAIR:AT1G73760.1 |
| InterPro:IPR001841 | InterPro:IPR013083 | RefSeq:NP_177517.1 | PFAM:PF13639 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50089 | PANTHER:PTHR22937 |
| PANTHER:PTHR22937:SF98 | UniProt:Q9C9T6 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI00000AB60D | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
Coordinates
chr1:-:27739168..27742008
Molecular Weight (calculated)
40618.2 Da
IEP (calculated)
9.684
GRAVY (calculated)
-0.638
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.