Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra003830.1-P | Field mustard | nucleus, plastid | 95.13 | 97.94 |
| CDY11092 | Canola | cytosol, plastid | 90.26 | 90.52 |
| CDX73013 | Canola | plastid | 76.5 | 75.21 |
| CDY60141 | Canola | plastid | 75.93 | 74.23 |
| AT1G73760.1 | Thale cress | nucleus, plastid | 68.19 | 64.85 |
| CDX96741 | Canola | nucleus | 54.73 | 52.47 |
| CDX83878 | Canola | nucleus | 53.58 | 52.38 |
| VIT_17s0000g03210.t01 | Wine grape | nucleus | 44.7 | 42.05 |
| KRH41763 | Soybean | nucleus | 43.55 | 40.32 |
| KRH48568 | Soybean | nucleus | 38.68 | 38.14 |
| KRH39137 | Soybean | nucleus | 39.26 | 37.13 |
| TraesCS3D01G260700.1 | Wheat | nucleus | 21.2 | 37.0 |
| Solyc03g118840.2.1 | Tomato | nucleus | 40.97 | 36.95 |
| PGSC0003DMT400014732 | Potato | nucleus | 40.69 | 36.6 |
| PGSC0003DMT400078539 | Potato | plastid | 25.21 | 35.34 |
| GSMUA_Achr4P11130_001 | Banana | nucleus, plastid | 33.81 | 35.33 |
| KRH60461 | Soybean | nucleus | 43.55 | 35.27 |
| GSMUA_Achr9P21480_001 | Banana | plastid | 32.66 | 33.53 |
| TraesCS3A01G260500.1 | Wheat | nucleus | 32.95 | 33.33 |
| TraesCS3B01G293600.1 | Wheat | nucleus | 32.66 | 33.24 |
| Solyc12g040390.1.1 | Tomato | nucleus, plastid | 28.65 | 32.79 |
| VIT_01s0011g04080.t01 | Wine grape | nucleus | 32.95 | 32.76 |
| OQU87370 | Sorghum | nucleus | 31.81 | 31.81 |
| Zm00001d043784_P002 | Maize | nucleus | 30.66 | 30.92 |
| Solyc05g008840.1.1 | Tomato | nucleus, plastid | 19.48 | 30.91 |
| GSMUA_Achr3P29390_001 | Banana | golgi, plastid | 33.24 | 30.53 |
| Zm00001d011636_P001 | Maize | nucleus | 29.51 | 30.47 |
| TraesCS1B01G393400.2 | Wheat | nucleus | 30.09 | 30.17 |
| TraesCS1D01G380000.2 | Wheat | nucleus | 29.23 | 29.48 |
| TraesCS1A01G373200.1 | Wheat | nucleus | 29.23 | 29.23 |
| GSMUA_Achr1P23200_001 | Banana | nucleus | 30.09 | 29.17 |
| HORVU3Hr1G064370.1 | Barley | plastid | 31.52 | 28.57 |
| Os05t0550000-00 | Rice | nucleus | 29.8 | 28.57 |
| EES18624 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 29.8 | 27.66 |
| Zm00001d038909_P001 | Maize | cytosol, mitochondrion | 29.8 | 27.08 |
| HORVU1Hr1G082970.1 | Barley | plastid | 26.65 | 24.67 |
| CDX97032 | Canola | plastid | 21.2 | 22.09 |
| CDY13429 | Canola | cytosol | 16.05 | 21.71 |
| CDY71882 | Canola | plastid | 21.2 | 21.14 |
| CDX85750 | Canola | nucleus | 21.49 | 19.43 |
| CDX77848 | Canola | nucleus | 11.17 | 18.4 |
| CDY67192 | Canola | nucleus | 11.17 | 18.31 |
| CDY40109 | Canola | nucleus | 9.46 | 17.74 |
| CDX78393 | Canola | nucleus | 23.5 | 16.6 |
| CDY31919 | Canola | nucleus | 12.89 | 16.48 |
| CDY00512 | Canola | nucleus | 12.89 | 16.48 |
| CDX95473 | Canola | nucleus | 21.78 | 16.38 |
| CDX91624 | Canola | nucleus | 10.32 | 16.36 |
| CDY32973 | Canola | nucleus | 19.2 | 16.34 |
| CDY68658 | Canola | nucleus | 21.49 | 15.99 |
| CDY27083 | Canola | nucleus | 10.03 | 15.98 |
| CDX88140 | Canola | nucleus | 21.78 | 15.77 |
| CDY53710 | Canola | nucleus | 10.89 | 15.7 |
| CDY43590 | Canola | nucleus | 18.91 | 15.68 |
| CDX70363 | Canola | nucleus | 21.49 | 15.43 |
| CDX93901 | Canola | nucleus | 10.6 | 15.42 |
| CDX97044 | Canola | nucleus | 22.35 | 15.29 |
| CDX91625 | Canola | cytosol | 10.03 | 15.28 |
| CDX97629 | Canola | nucleus | 19.2 | 15.19 |
| CDX69813 | Canola | mitochondrion | 22.35 | 14.63 |
| CDY68521 | Canola | nucleus | 18.34 | 14.51 |
| CDX75805 | Canola | cytosol | 17.77 | 14.0 |
| CDX82450 | Canola | nucleus | 17.48 | 13.62 |
| CDY55435 | Canola | nucleus | 20.34 | 13.45 |
| CDX79718 | Canola | nucleus | 20.06 | 13.18 |
| CDY27082 | Canola | cytosol | 8.88 | 13.03 |
| CDY17114 | Canola | nucleus | 19.77 | 12.99 |
| CDY62314 | Canola | nucleus | 21.78 | 12.84 |
| CDY63645 | Canola | nucleus | 16.91 | 12.77 |
| CDY46757 | Canola | nucleus | 19.48 | 12.76 |
| CDY37230 | Canola | nucleus | 21.49 | 12.73 |
| CDY24595 | Canola | nucleus | 11.46 | 12.7 |
| CDY68424 | Canola | nucleus | 19.48 | 12.66 |
| CDY25357 | Canola | nucleus | 11.46 | 12.5 |
| CDX71531 | Canola | nucleus | 22.64 | 12.4 |
| CDY22376 | Canola | nucleus | 21.78 | 12.36 |
| CDY13433 | Canola | nucleus | 16.33 | 12.23 |
| CDY24110 | Canola | nucleus | 16.05 | 12.17 |
| CDY26006 | Canola | nucleus | 16.05 | 12.12 |
| CDY17061 | Canola | nucleus | 20.63 | 11.88 |
| CDY43220 | Canola | nucleus | 20.63 | 11.82 |
| CDY33429 | Canola | nucleus | 11.17 | 11.82 |
| CDY25871 | Canola | nucleus | 16.05 | 11.72 |
| CDY42218 | Canola | nucleus | 11.17 | 11.68 |
| CDY55839 | Canola | nucleus | 16.05 | 11.45 |
| CDY69560 | Canola | nucleus | 8.88 | 6.09 |
| CDY36635 | Canola | nucleus | 7.74 | 4.53 |
| CDY47948 | Canola | nucleus | 5.44 | 3.78 |
Protein Annotations
| EnsemblPlants:CDX68213 | EnsemblPlantsGene:GSBRNA2T00099476001 | Gene3D:3.30.40.10 | GO:A0A078BZ79 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF96 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX68213 | ProteinID:CDX68213.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EEF22E |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA07g22530D
Coordinates
chrLK031787:+:4436041..4439173
Molecular Weight (calculated)
38806.0 Da
IEP (calculated)
8.902
GRAVY (calculated)
-0.739
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MPSSGDPSTT IGQHIRHQPM NLPPFPTSDE PLIPKPSRIC KSAMSTFFLL PSSSNEPNNR RKGKKQTTSS FRSLGCTSSA SQQVSVPAVI RSSANWDASD
101: VKSKKTKSKK KNNGCSGYSG GGSVKILSEA ERSGCGPVPD VWCGPGVGFS TDAVVSGTVE AEPPSRNIPA RRKIDGEGSS VPPRRSHNQE TSLYFDSDLT
201: SRDEQMQTLF SDRYHRHLRQ PYPNGLDEMM MIHNGFVMGE MLGSHDHFRD LRLNVDGMSY EQLLELGDRI GYVDTGLNEK QIKTCLWRVK PSHKATPLED
301: RKCSICQEEY EGKDEVGKLR CGHRYHIHCA KQWLLRKNSC PVCKTMPFA
101: VKSKKTKSKK KNNGCSGYSG GGSVKILSEA ERSGCGPVPD VWCGPGVGFS TDAVVSGTVE AEPPSRNIPA RRKIDGEGSS VPPRRSHNQE TSLYFDSDLT
201: SRDEQMQTLF SDRYHRHLRQ PYPNGLDEMM MIHNGFVMGE MLGSHDHFRD LRLNVDGMSY EQLLELGDRI GYVDTGLNEK QIKTCLWRVK PSHKATPLED
301: RKCSICQEEY EGKDEVGKLR CGHRYHIHCA KQWLLRKNSC PVCKTMPFA
001: MPVSAEPSSS SSTTIGQHMR LQRPRNHRNL PPISTADEPL IPKPSRVSKS AMSSFFLLPE TTKKKPNGTA SFRGLGCTTS ASQQVSVPAV IRSSADWDAS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
101: NFKIKKTKKK NKNKGSSSYN GGSIKILSEA STSSSVACAA IPDVWCGPGV GFSTDAVVGG SIDTVVSDPP RRNIPVRRKI DGDKTNSNSN NHREGSSSLL
201: PRRSLNQESN PYFDSDSSFL TSRAEQTDRY HRHLRLPYPD GLAEMMMMQN GFVMGGVLSS FDQFRDMRLN VDNMTYEQLL ELGERIGHVN TGLTEKQIKS
301: CLRKVKPCRQ DTTVADRKCI ICQDEYEAKD EVGELRCGHR FHIDCVNQWL VRKNSCPVCK TMAYNKS
Arabidopsis Description
Putative RING zinc finger protein; 69105-67310 [Source:UniProtKB/TrEMBL;Acc:Q9C9T6]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.