Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra009015.1-P | Field mustard | plastid | 96.44 | 96.44 |
| CDY71882 | Canola | plastid | 60.98 | 92.86 |
| CDX97032 | Canola | plastid | 58.16 | 92.54 |
| CDX97044 | Canola | nucleus | 88.18 | 92.16 |
| CDX95473 | Canola | nucleus | 79.74 | 91.59 |
| CDX78393 | Canola | nucleus | 71.67 | 77.33 |
| CDX70363 | Canola | nucleus | 69.79 | 76.54 |
| CDX85750 | Canola | nucleus | 54.97 | 75.91 |
| AT5G10650.2 | Thale cress | nucleus | 72.05 | 73.14 |
| CDY40109 | Canola | nucleus | 23.08 | 66.13 |
| CDX88140 | Canola | nucleus | 48.03 | 53.11 |
| CDY68658 | Canola | nucleus | 46.34 | 52.67 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 9.01 | 52.17 |
| Zm00001d013776_P001 | Maize | cytosol | 11.63 | 48.06 |
| Zm00001d019616_P001 | Maize | cytosol | 11.63 | 48.06 |
| Zm00001d015453_P001 | Maize | cytosol | 11.63 | 48.06 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 44.47 | 43.09 |
| GSMUA_AchrUn_... | Banana | nucleus | 18.01 | 42.67 |
| KRH04957 | Soybean | nucleus | 41.09 | 41.17 |
| KRH52597 | Soybean | nucleus | 40.9 | 40.3 |
| KRH16134 | Soybean | nucleus | 39.96 | 38.38 |
| PGSC0003DMT400067670 | Potato | nucleus | 37.34 | 37.69 |
| Solyc12g096420.1.1 | Tomato | nucleus | 38.65 | 37.39 |
| Solyc08g006460.2.1 | Tomato | nucleus | 36.4 | 36.53 |
| PGSC0003DMT400075959 | Potato | nucleus | 37.15 | 36.33 |
| KRH61936 | Soybean | nucleus | 36.96 | 35.37 |
| CDY13429 | Canola | cytosol | 16.89 | 34.88 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 28.89 | 29.96 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 30.58 | 28.9 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 31.33 | 28.64 |
| Os06t0695600-01 | Rice | nucleus | 30.58 | 28.15 |
| KXG20741 | Sorghum | nucleus | 30.77 | 27.8 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 30.02 | 27.68 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 29.46 | 27.4 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 30.96 | 27.36 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 30.02 | 27.3 |
| Zm00001d014609_P002 | Maize | nucleus | 29.83 | 27.18 |
| Os08t0241400-00 | Rice | nucleus | 18.95 | 26.79 |
| EES12797 | Sorghum | nucleus | 18.76 | 26.74 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 18.76 | 26.67 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 18.57 | 26.54 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 18.2 | 26.29 |
| Zm00001d015289_P001 | Maize | nucleus | 27.77 | 26.15 |
| EES04530 | Sorghum | nucleus | 25.33 | 26.06 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 18.01 | 25.81 |
| OQU80147 | Sorghum | nucleus | 17.26 | 25.7 |
| Zm00001d024406_P002 | Maize | nucleus | 17.26 | 25.7 |
| Zm00001d026248_P001 | Maize | nucleus | 17.64 | 24.74 |
| Os02t0150700-01 | Rice | extracellular | 29.46 | 24.49 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 18.01 | 24.18 |
| Os04t0603200-01 | Rice | nucleus | 14.82 | 24.01 |
| CDY63645 | Canola | nucleus | 20.64 | 23.81 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 25.89 | 23.75 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 30.58 | 23.45 |
| CDX73013 | Canola | plastid | 15.57 | 23.38 |
| CDY13433 | Canola | nucleus | 20.26 | 23.18 |
| CDY60141 | Canola | plastid | 15.38 | 22.97 |
| CDY11092 | Canola | cytosol, plastid | 14.63 | 22.41 |
| CDX68213 | Canola | nucleus, plastid | 14.63 | 22.35 |
| CDY67192 | Canola | nucleus | 8.82 | 22.07 |
| CDX77848 | Canola | nucleus | 8.63 | 21.7 |
| CDX96741 | Canola | nucleus | 14.63 | 21.43 |
| CDX83878 | Canola | nucleus | 14.26 | 21.29 |
| CDX93901 | Canola | nucleus | 9.19 | 20.42 |
| CDY53710 | Canola | nucleus | 9.19 | 20.25 |
| CDY27083 | Canola | nucleus | 7.69 | 18.72 |
| CDX91624 | Canola | nucleus | 7.69 | 18.64 |
| CDY26006 | Canola | nucleus | 15.38 | 17.75 |
| CDY43590 | Canola | nucleus | 13.88 | 17.58 |
| CDY32973 | Canola | nucleus | 13.51 | 17.56 |
| CDY31919 | Canola | nucleus | 8.82 | 17.22 |
| CDY00512 | Canola | nucleus | 8.82 | 17.22 |
| CDY24110 | Canola | nucleus | 14.82 | 17.17 |
| CDX75805 | Canola | cytosol | 14.07 | 16.93 |
| CDY68521 | Canola | nucleus | 13.88 | 16.78 |
| CDX97629 | Canola | nucleus | 13.7 | 16.55 |
| CDY25871 | Canola | nucleus | 14.45 | 16.11 |
| CDX82450 | Canola | nucleus | 13.51 | 16.07 |
| CDX79718 | Canola | nucleus | 15.95 | 16.01 |
| CDY62314 | Canola | nucleus | 17.64 | 15.88 |
| CDY24595 | Canola | nucleus | 9.38 | 15.87 |
| CDY17114 | Canola | nucleus | 15.76 | 15.82 |
| CDY37230 | Canola | nucleus | 17.45 | 15.79 |
| CDY46757 | Canola | nucleus | 15.76 | 15.76 |
| CDY55839 | Canola | nucleus | 14.26 | 15.54 |
| CDY55435 | Canola | nucleus | 15.2 | 15.34 |
| CDY25357 | Canola | nucleus | 9.19 | 15.31 |
| CDY42218 | Canola | nucleus | 9.57 | 15.27 |
| CDY33429 | Canola | nucleus | 9.38 | 15.15 |
| CDY68424 | Canola | nucleus | 15.01 | 14.9 |
| CDY17061 | Canola | nucleus | 16.89 | 14.85 |
| CDY43220 | Canola | nucleus | 16.7 | 14.61 |
| CDY22376 | Canola | nucleus | 16.7 | 14.47 |
| CDX91625 | Canola | cytosol | 6.0 | 13.97 |
| CDX71531 | Canola | nucleus | 16.14 | 13.5 |
| CDY27082 | Canola | cytosol | 5.82 | 13.03 |
| CDY47948 | Canola | nucleus | 7.32 | 7.75 |
| CDY69560 | Canola | nucleus | 6.19 | 6.48 |
| CDY36635 | Canola | nucleus | 6.75 | 6.04 |
Protein Annotations
| EnsemblPlants:CDX69813 | EnsemblPlantsGene:GSBRNA2T00135868001 | Gene3D:3.30.40.10 | GO:A0A078C451 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDX69813 | ProteinID:CDX69813.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EE0137 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA10g21620D
Coordinates
chrLK031790:+:1942663..1946207
Molecular Weight (calculated)
57881.3 Da
IEP (calculated)
10.065
GRAVY (calculated)
-0.650
Length
533 amino acids
Sequence
(BLAST)
(BLAST)
001: MFILVNPSLH VFYGRRRIIA RRRKKRERMD GCAGKRSVDR MVLPRKASGP VLRENMKKKD EKSVSFCSRI ACSAKVTSTK GTNRIGSTAD NAKVGRPGKE
101: IVGSSSRAPG GFGYLRKPAV GTTGRRQPSS NVDTGSSETS SSLDHPAAVK PILPRLKTKR GAISVQSQNT VSGEVVGSSS RGTIRSSHQK PDLRTRDTLM
201: PPSVSSSSGG DHTLRGGLSR NGLRNLRCNS VSDVLPTKSS SGTKVSVTKK KNSDGESSSS SQGIKSRVLV MKGRNQSSTH GNGVTVSDNR RNRMVPTIRD
301: NSVVSSSGRR SGRLGVVASP ATSRQTPQPA TPVNPNPSLS VTPSNSHSST DWLSSMMPGS PSEAQPSSSL VDRDGLSDYN MNGIAEALLV LDRIDQELRY
401: EQLASLETNL FASGMIRFYD QHSDMRLDID NMSYEELLAL GDEIGTVSTA LSEEALSRSL KKSIYQETDE TGPISLDKDD DIKCSICQEE YVDGDEVGTM
501: PCEHMYHVNC VQQWLRMKNW CPICKTSAEE EKS
101: IVGSSSRAPG GFGYLRKPAV GTTGRRQPSS NVDTGSSETS SSLDHPAAVK PILPRLKTKR GAISVQSQNT VSGEVVGSSS RGTIRSSHQK PDLRTRDTLM
201: PPSVSSSSGG DHTLRGGLSR NGLRNLRCNS VSDVLPTKSS SGTKVSVTKK KNSDGESSSS SQGIKSRVLV MKGRNQSSTH GNGVTVSDNR RNRMVPTIRD
301: NSVVSSSGRR SGRLGVVASP ATSRQTPQPA TPVNPNPSLS VTPSNSHSST DWLSSMMPGS PSEAQPSSSL VDRDGLSDYN MNGIAEALLV LDRIDQELRY
401: EQLASLETNL FASGMIRFYD QHSDMRLDID NMSYEELLAL GDEIGTVSTA LSEEALSRSL KKSIYQETDE TGPISLDKDD DIKCSICQEE YVDGDEVGTM
501: PCEHMYHVNC VQQWLRMKNW CPICKTSAEE EKS
001: MDGCAGKRSV DRLVVPRKAS GLTLRENMNK TDGKNVPFCS RVGCTAKVTS TKRSRIGSTD NNTKVGLPPV PSTLNRKEIV GSSSRTPGGF GYLRKPAKVT
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
101: ARRQPSSSLD TESSETSCIH DDPAATEPTL PRQKTKRVTI NVHPQSAVSR EVVITKAGSS SRGTSRISHP KSELGTRDAL TGPSVSTSSG NSEHTVRGGL
201: SRHRLRNLSC NSVSDVLPTN SNSATKISVT KKKNADGESS LSSKGSKTSV LVPKVRNQIS SHGNGVTVSD NRRNRVVPSI RDSSTVVSNG CRRAGYFGRS
301: ERLGATASSA TSRQMPHPTT PTDPNPSLSF CPSNIYSSTG RVHSNMPGSP TEADPSSSLV NRDGLSHYNM NGIAEVLLAL ERIEHDEELT YEQLASIETN
401: LFSSGMFRFY DQHRDMRLDI DNMSYEELLA LGDKMGTVST ALSEEALSRS LKQSIYQETD ETGSISLYKD DDIKCSICQE EYVDGDELGT IPCQHMYHVS
501: CVQQWLRMKN WCPICKTSAE EEKSI
Arabidopsis Description
At5g10650 [Source:UniProtKB/TrEMBL;Acc:Q5XEP8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.