Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038240.1-P | Field mustard | nucleus | 99.1 | 99.4 |
| CDY33429 | Canola | nucleus | 95.21 | 96.36 |
| CDY25357 | Canola | nucleus | 83.83 | 87.5 |
| CDY24595 | Canola | nucleus | 81.74 | 86.67 |
| AT3G19910.1 | Thale cress | nucleus | 81.44 | 80.0 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 48.8 | 52.92 |
| GSMUA_Achr4P05140_001 | Banana | nucleus | 45.21 | 51.01 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 17.96 | 50.85 |
| GSMUA_Achr3P26700_001 | Banana | nucleus | 42.81 | 48.97 |
| KRG90628 | Soybean | nucleus | 48.8 | 48.66 |
| OQU80744 | Sorghum | mitochondrion | 20.96 | 48.61 |
| TraesCS7A01G271500.1 | Wheat | cytosol, mitochondrion, nucleus | 41.02 | 47.57 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 17.07 | 46.72 |
| EES15239 | Sorghum | nucleus | 42.81 | 45.54 |
| Os08t0548300-01 | Rice | nucleus | 41.32 | 45.25 |
| Os09t0535100-01 | Rice | nucleus | 43.71 | 44.92 |
| EER97094 | Sorghum | nucleus | 43.41 | 44.75 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 45.51 | 44.71 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 38.02 | 44.25 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 39.22 | 43.81 |
| TraesCS7D01G271800.4 | Wheat | cytosol, mitochondrion, nucleus | 38.92 | 43.33 |
| KRH36126 | Soybean | cytosol, mitochondrion, nucleus | 45.81 | 43.1 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 44.31 | 42.77 |
| TraesCS7B01G170500.1 | Wheat | cytosol, mitochondrion, nucleus | 38.02 | 42.47 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 40.12 | 41.61 |
| Zm00001d006226_P001 | Maize | peroxisome | 39.52 | 41.51 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 45.81 | 40.48 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 44.31 | 40.0 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 35.93 | 39.87 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 35.93 | 39.09 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 23.95 | 36.04 |
| CDX93901 | Canola | nucleus | 20.96 | 29.17 |
| CDY53710 | Canola | nucleus | 20.96 | 28.93 |
| CDX77848 | Canola | nucleus | 16.17 | 25.47 |
| CDY67192 | Canola | nucleus | 15.87 | 24.88 |
| CDY27083 | Canola | nucleus | 15.87 | 24.2 |
| CDX91624 | Canola | nucleus | 15.87 | 24.09 |
| CDY00512 | Canola | nucleus | 19.16 | 23.44 |
| CDY31919 | Canola | nucleus | 19.16 | 23.44 |
| CDX91625 | Canola | cytosol | 14.37 | 20.96 |
| CDY27082 | Canola | cytosol | 13.17 | 18.49 |
| CDY13429 | Canola | cytosol | 12.57 | 16.28 |
| CDX97032 | Canola | plastid | 14.07 | 14.03 |
| CDY71882 | Canola | plastid | 14.07 | 13.43 |
| CDX85750 | Canola | nucleus | 15.27 | 13.21 |
| CDY40109 | Canola | nucleus | 6.89 | 12.37 |
| CDY60141 | Canola | plastid | 12.57 | 11.76 |
| CDX73013 | Canola | plastid | 12.28 | 11.55 |
| CDY32973 | Canola | nucleus | 14.07 | 11.46 |
| CDX68213 | Canola | nucleus, plastid | 11.68 | 11.17 |
| CDY43590 | Canola | nucleus | 14.07 | 11.16 |
| CDY17114 | Canola | nucleus | 17.37 | 10.92 |
| CDX95473 | Canola | nucleus | 14.97 | 10.78 |
| CDY46757 | Canola | nucleus | 17.07 | 10.69 |
| CDY11092 | Canola | cytosol, plastid | 11.08 | 10.63 |
| CDX75805 | Canola | cytosol | 14.07 | 10.61 |
| CDX82450 | Canola | nucleus | 14.07 | 10.49 |
| CDX96741 | Canola | nucleus | 11.38 | 10.44 |
| CDY68521 | Canola | nucleus | 13.77 | 10.43 |
| CDX97044 | Canola | nucleus | 15.87 | 10.39 |
| CDX88140 | Canola | nucleus | 14.97 | 10.37 |
| CDX83878 | Canola | nucleus | 11.08 | 10.36 |
| CDX79718 | Canola | nucleus | 16.47 | 10.36 |
| CDY68658 | Canola | nucleus | 14.37 | 10.23 |
| CDX97629 | Canola | nucleus | 13.47 | 10.2 |
| CDY63645 | Canola | nucleus | 14.07 | 10.17 |
| CDX78393 | Canola | nucleus | 14.97 | 10.12 |
| CDY13433 | Canola | nucleus | 14.07 | 10.09 |
| CDY24110 | Canola | nucleus | 13.47 | 9.78 |
| CDY26006 | Canola | nucleus | 13.47 | 9.74 |
| CDX70363 | Canola | nucleus | 14.07 | 9.67 |
| CDY55435 | Canola | nucleus | 15.27 | 9.66 |
| CDY25871 | Canola | nucleus | 13.77 | 9.62 |
| CDY55839 | Canola | nucleus | 14.07 | 9.61 |
| CDX69813 | Canola | mitochondrion | 15.27 | 9.57 |
| CDY68424 | Canola | nucleus | 15.27 | 9.5 |
| CDY22376 | Canola | nucleus | 16.47 | 8.94 |
| CDX71531 | Canola | nucleus | 16.47 | 8.63 |
| CDY62314 | Canola | nucleus | 14.97 | 8.45 |
| CDY37230 | Canola | nucleus | 14.67 | 8.32 |
| CDY43220 | Canola | nucleus | 14.97 | 8.21 |
| CDY17061 | Canola | nucleus | 14.67 | 8.09 |
| CDY47948 | Canola | nucleus | 8.68 | 5.77 |
| CDY69560 | Canola | nucleus | 5.39 | 3.54 |
| CDY36635 | Canola | nucleus | 4.79 | 2.68 |
Protein Annotations
| EnsemblPlants:CDY42218 | EnsemblPlantsGene:GSBRNA2T00074431001 | Gene3D:3.30.40.10 | GO:A0A078HZL7 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF166 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY42218 | ProteinID:CDY42218.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EDE0FE |
| UniProt:A0A078HZL7 | MapMan:35.1 | : | : | : | : |
Description
BnaA01g25770DBnaA01g25770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZL7]
Coordinates
chrLK032518:+:150771..153653
Molecular Weight (calculated)
36412.2 Da
IEP (calculated)
3.640
GRAVY (calculated)
-0.896
Length
334 amino acids
Sequence
(BLAST)
(BLAST)
001: MAMEKDNSDH ASNVAVTAEQ ATKINDADAR SPENRQTGVE PESGSGSSEK GEEGAETAAA AVDDDESGSN SVGELLPPRS SSSARVPFTN LSQIDSDLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYEEDEFDD PEDEDEDEYE TDDDPQEDAP DVNANGDDQE DGGRNAETEE AGYSDDEAFA RAIQEAEARE
201: MADRLSALTG LANRVEVLED DDHTSEDAWD EMDPDELSYE ELLALGDIVG TESRGLSADT IASLPSKRYK DGENQNGTNE SCVICRLDYE DDDDLILLPC
301: KHSYHSECIN NWLKINKICP VCSAEVSTSS AGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYEEDEFDD PEDEDEDEYE TDDDPQEDAP DVNANGDDQE DGGRNAETEE AGYSDDEAFA RAIQEAEARE
201: MADRLSALTG LANRVEVLED DDHTSEDAWD EMDPDELSYE ELLALGDIVG TESRGLSADT IASLPSKRYK DGENQNGTNE SCVICRLDYE DDDDLILLPC
301: KHSYHSECIN NWLKINKICP VCSAEVSTSS AGQS
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.