Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra024009.1-P | Field mustard | nucleus | 54.26 | 80.0 |
| CDY63645 | Canola | nucleus | 92.64 | 51.73 |
| CDY13433 | Canola | nucleus | 91.47 | 50.64 |
| AT4G31450.2 | Thale cress | nucleus | 82.17 | 42.66 |
| HORVU3Hr1G054920.1 | Barley | cytosol | 14.73 | 41.3 |
| Zm00001d015453_P001 | Maize | cytosol | 20.54 | 41.09 |
| Zm00001d019616_P001 | Maize | cytosol | 20.16 | 40.31 |
| Zm00001d013776_P001 | Maize | cytosol | 20.16 | 40.31 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.91 | 32.0 |
| CDX97032 | Canola | plastid | 33.72 | 25.97 |
| CDY71882 | Canola | plastid | 33.72 | 24.86 |
| CDX85750 | Canola | nucleus | 32.56 | 21.76 |
| CDY40109 | Canola | nucleus | 14.73 | 20.43 |
| OQU80147 | Sorghum | nucleus | 27.13 | 19.55 |
| TraesCS2B01G456100.1 | Wheat | nucleus | 27.52 | 19.03 |
| EES12797 | Sorghum | nucleus | 27.52 | 18.98 |
| TraesCS2A01G437200.1 | Wheat | nucleus | 27.13 | 18.97 |
| CDX95473 | Canola | nucleus | 34.11 | 18.97 |
| Zm00001d024406_P002 | Maize | nucleus | 25.97 | 18.72 |
| HORVU2Hr1G101370.5 | Barley | nucleus | 27.13 | 18.67 |
| TraesCS2D01G432800.1 | Wheat | nucleus | 26.74 | 18.55 |
| CDX77848 | Canola | nucleus | 15.12 | 18.4 |
| CDY67192 | Canola | nucleus | 15.12 | 18.31 |
| CDX70363 | Canola | nucleus | 34.11 | 18.11 |
| CDX78393 | Canola | nucleus | 34.5 | 18.02 |
| CDX97044 | Canola | nucleus | 34.88 | 17.65 |
| Os08t0241400-00 | Rice | nucleus | 25.58 | 17.51 |
| Zm00001d026248_P001 | Maize | nucleus | 25.58 | 17.37 |
| CDY60141 | Canola | plastid | 24.03 | 17.37 |
| CDY68658 | Canola | nucleus | 31.4 | 17.27 |
| CDX73013 | Canola | plastid | 23.64 | 17.18 |
| CDY27083 | Canola | nucleus | 14.34 | 16.89 |
| CDX69813 | Canola | mitochondrion | 34.88 | 16.89 |
| CDX91624 | Canola | nucleus | 14.34 | 16.82 |
| Zm00001d002416_P002 | Maize | endoplasmic reticulum, extracellular, vacuole | 25.58 | 16.62 |
| CDX88140 | Canola | nucleus | 31.01 | 16.6 |
| KRH04957 | Soybean | nucleus | 33.72 | 16.35 |
| VIT_04s0008g02390.t01 | Wine grape | nucleus | 34.5 | 16.18 |
| CDY11092 | Canola | cytosol, plastid | 21.71 | 16.09 |
| CDX68213 | Canola | nucleus, plastid | 21.71 | 16.05 |
| EES04530 | Sorghum | nucleus | 32.17 | 16.02 |
| KRH16134 | Soybean | nucleus | 34.11 | 15.86 |
| CDX93901 | Canola | nucleus | 14.73 | 15.83 |
| PGSC0003DMT400075959 | Potato | nucleus | 33.33 | 15.78 |
| CDY46757 | Canola | nucleus | 32.56 | 15.76 |
| GSMUA_Achr1P23500_001 | Banana | nucleus | 31.4 | 15.76 |
| CDY53710 | Canola | nucleus | 14.73 | 15.7 |
| KRH52597 | Soybean | nucleus | 32.56 | 15.53 |
| CDX79718 | Canola | nucleus | 31.78 | 15.44 |
| Solyc08g006460.2.1 | Tomato | nucleus | 31.4 | 15.25 |
| PGSC0003DMT400067670 | Potato | nucleus | 31.01 | 15.15 |
| CDY32973 | Canola | nucleus | 24.03 | 15.12 |
| Solyc12g096420.1.1 | Tomato | nucleus | 32.17 | 15.06 |
| CDY24110 | Canola | nucleus | 26.74 | 15.0 |
| CDY43590 | Canola | nucleus | 24.42 | 14.96 |
| CDY26006 | Canola | nucleus | 26.74 | 14.94 |
| Os04t0603200-01 | Rice | nucleus | 18.99 | 14.89 |
| CDX91625 | Canola | cytosol | 13.18 | 14.85 |
| CDX75805 | Canola | cytosol | 25.19 | 14.67 |
| CDY25871 | Canola | nucleus | 27.13 | 14.64 |
| CDY55839 | Canola | nucleus | 27.52 | 14.52 |
| CDY68521 | Canola | nucleus | 24.81 | 14.51 |
| Os06t0695600-01 | Rice | nucleus | 32.56 | 14.51 |
| Zm00001d015289_P001 | Maize | nucleus | 31.4 | 14.31 |
| CDY00512 | Canola | nucleus | 15.12 | 14.29 |
| CDY31919 | Canola | nucleus | 15.12 | 14.29 |
| CDX82450 | Canola | nucleus | 24.81 | 14.29 |
| CDX97629 | Canola | nucleus | 24.03 | 14.06 |
| TraesCS7B01G328500.1 | Wheat | nucleus | 31.4 | 14.01 |
| CDX83878 | Canola | nucleus | 19.38 | 14.01 |
| HORVU7Hr1G098540.1 | Barley | nucleus | 31.78 | 13.99 |
| TraesCS7D01G420400.1 | Wheat | nucleus | 31.01 | 13.96 |
| CDY27082 | Canola | cytosol | 12.79 | 13.87 |
| CDY55435 | Canola | nucleus | 28.29 | 13.83 |
| CDX96741 | Canola | nucleus | 19.38 | 13.74 |
| CDY68424 | Canola | nucleus | 28.29 | 13.59 |
| Zm00001d014609_P002 | Maize | nucleus | 30.62 | 13.5 |
| TraesCS6B01G149700.2 | Wheat | nucleus | 29.46 | 13.48 |
| KXG20741 | Sorghum | nucleus | 30.23 | 13.22 |
| CDY25357 | Canola | nucleus | 16.28 | 13.12 |
| Os02t0150700-01 | Rice | extracellular | 32.17 | 12.95 |
| KRH61936 | Soybean | nucleus | 27.91 | 12.93 |
| TraesCS6A01G121400.2 | Wheat | nucleus | 29.07 | 12.86 |
| CDY33429 | Canola | nucleus | 16.28 | 12.73 |
| CDY24595 | Canola | nucleus | 15.5 | 12.7 |
| TraesCS6D01G111500.2 | Wheat | nucleus | 29.46 | 12.6 |
| CDY42218 | Canola | nucleus | 16.28 | 12.57 |
| CDY17114 | Canola | nucleus | 25.58 | 12.43 |
| CDY22376 | Canola | nucleus | 27.52 | 11.54 |
| CDY43220 | Canola | nucleus | 25.97 | 11.0 |
| CDY62314 | Canola | nucleus | 25.19 | 10.98 |
| HORVU6Hr1G022370.10 | Barley | mitochondrion | 29.46 | 10.94 |
| CDY17061 | Canola | nucleus | 25.58 | 10.89 |
| CDY37230 | Canola | nucleus | 24.81 | 10.87 |
| CDX71531 | Canola | nucleus | 25.58 | 10.36 |
| TraesCS7A01G428300.2 | Wheat | nucleus | 22.87 | 10.15 |
| CDY47948 | Canola | nucleus | 5.04 | 2.58 |
| CDY69560 | Canola | nucleus | 3.1 | 1.57 |
| CDY36635 | Canola | nucleus | 3.1 | 1.34 |
Protein Annotations
| EnsemblPlants:CDY13429 | EnsemblPlantsGene:GSBRNA2T00077714001 | Gene3D:3.30.40.10 | GO:A0A078FKE3 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR22937 | PANTHER:PTHR22937:SF53 | PFAM:PF13639 | PFscan:PS50089 |
| ProteinID:CDY13429 | ProteinID:CDY13429.1 | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EEB418 | UniProt:A0A078FKE3 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA03g51470DBnaA03g51470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKE3]
Coordinates
chrLK032035:-:259440..260903
Molecular Weight (calculated)
29262.4 Da
IEP (calculated)
4.789
GRAVY (calculated)
-0.526
Length
258 amino acids
Sequence
(BLAST)
(BLAST)
001: MQPFIKIVSE LPSEERRLAF NPRGGSVLDT RRARHCILND ASVGSQRSVN RDSQNRGIGR NGLSSIITRE MSQTETSNNL NSPVSLELFS GFPDFGSLSS
101: QDSFHNYNLD GISEILPELD RIEQDIELNY EELLIMESGL LLGGLSFYDQ HRDMRLDIDN MSYEELLALE ERIGTVRTAL TEEAISKSLK TSIYQIKPCD
201: HKEDAKCSIC QEEYTIGDEV GRLHCEHTYH LKCVQEWLRM KSWCPICKTS ADTSSSSK
101: QDSFHNYNLD GISEILPELD RIEQDIELNY EELLIMESGL LLGGLSFYDQ HRDMRLDIDN MSYEELLALE ERIGTVRTAL TEEAISKSLK TSIYQIKPCD
201: HKEDAKCSIC QEEYTIGDEV GRLHCEHTYH LKCVQEWLRM KSWCPICKTS ADTSSSSK
001: MDRWSSKRAM EARPDSKKKG GVVFRDRFNS NSCKVPICSD EKKSMNFTRF VGSSDKKEKS VLSTYRSSPN GKEVIGTSSK ICISSSSSVK SGEKQPFSQI
101: AIDSSESSRG SEDEVESEIL QVPLGRDKRR MNNKLIYGKV ITPEAECSKL PSSSRIKRGF RQRFGLSKQE FHPGPSGQST SANRGCSPLL SGVIPSGFGL
201: DKRLSRKADT ISKTKVYGES SSSSSARGKN VTEPPPVEVR RRSFNPRGSV SDSRRARHCI LDDDNDVASV GSQRLANRNN SRIRGSGRDG LSSVTAAEMS
301: QTETSNNLNS PVSLELFSGF PEFGLSGSLL SHDSFRSYNL DGISEILPEL DRIEQDIELN YEDLLIMETG LLLGGLSFHD QHRDMRLDID NMSYEELLAL
401: EERIGTVSTA LTEEAISKCL KTSIYQMKPL SYGSITKSPS DNKEDAKCSI CQEEYTIGDE VGRLHCEHTY HVKCVQEWLR IKSWCPICKA TAETSSK
101: AIDSSESSRG SEDEVESEIL QVPLGRDKRR MNNKLIYGKV ITPEAECSKL PSSSRIKRGF RQRFGLSKQE FHPGPSGQST SANRGCSPLL SGVIPSGFGL
201: DKRLSRKADT ISKTKVYGES SSSSSARGKN VTEPPPVEVR RRSFNPRGSV SDSRRARHCI LDDDNDVASV GSQRLANRNN SRIRGSGRDG LSSVTAAEMS
301: QTETSNNLNS PVSLELFSGF PEFGLSGSLL SHDSFRSYNL DGISEILPEL DRIEQDIELN YEDLLIMETG LLLGGLSFHD QHRDMRLDID NMSYEELLAL
401: EERIGTVSTA LTEEAISKCL KTSIYQMKPL SYGSITKSPS DNKEDAKCSI CQEEYTIGDE VGRLHCEHTY HVKCVQEWLR IKSWCPICKA TAETSSK
Arabidopsis Description
At4g31450/F3L17_20 [Source:UniProtKB/TrEMBL;Acc:Q944Q9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.