Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG90628 | Soybean | nucleus | 85.63 | 90.75 |
| VIT_10s0042g00580.t01 | Wine grape | nucleus | 55.49 | 63.96 |
| TraesCS5D01G286700.1 | Wheat | nucleus | 17.75 | 53.39 |
| GSMUA_Achr4P05140_001 | Banana | nucleus | 42.54 | 51.01 |
| TraesCS7A01G271500.1 | Wheat | cytosol, mitochondrion, nucleus | 40.28 | 49.65 |
| OQU80744 | Sorghum | mitochondrion | 20.0 | 49.31 |
| CDY24595 | Canola | nucleus | 43.1 | 48.57 |
| AT3G19910.1 | Thale cress | nucleus | 46.2 | 48.24 |
| CDY25357 | Canola | nucleus | 43.38 | 48.12 |
| Bra022466.1-P | Field mustard | nucleus | 43.38 | 47.53 |
| GSMUA_Achr3P26700_001 | Banana | nucleus | 38.59 | 46.92 |
| TraesCS7B01G170500.1 | Wheat | cytosol, mitochondrion, nucleus | 39.44 | 46.82 |
| TraesCS5B01G279200.1 | Wheat | cytosol | 16.06 | 46.72 |
| EER97094 | Sorghum | nucleus | 42.54 | 46.6 |
| Zm00001d006226_P001 | Maize | peroxisome | 41.69 | 46.54 |
| Os08t0548300-01 | Rice | nucleus | 39.72 | 46.23 |
| HORVU7Hr1G057310.5 | Barley | cytosol, nucleus, plastid | 38.87 | 46.15 |
| TraesCS7D01G271800.4 | Wheat | cytosol, mitochondrion, nucleus | 38.87 | 46.0 |
| Bra038240.1-P | Field mustard | nucleus | 43.1 | 45.95 |
| CDY42218 | Canola | nucleus | 43.1 | 45.81 |
| CDY33429 | Canola | nucleus | 42.54 | 45.76 |
| Os09t0535100-01 | Rice | nucleus | 41.13 | 44.92 |
| EES15239 | Sorghum | nucleus | 39.72 | 44.9 |
| Zm00001d021314_P005 | Maize | cytosol, mitochondrion, nucleus | 40.56 | 44.72 |
| TraesCS5D01G331600.1 | Wheat | cytosol, mitochondrion, nucleus | 41.97 | 43.82 |
| HORVU5Hr1G082790.2 | Barley | nucleus | 41.97 | 43.06 |
| Zm00001d053212_P002 | Maize | cytosol, mitochondrion, nucleus, plastid | 34.65 | 42.86 |
| GSMUA_Achr4P04290_001 | Banana | nucleus | 26.2 | 41.89 |
| GSMUA_Achr9P24150_001 | Banana | nucleus | 35.21 | 41.53 |
| GSMUA_Achr4P04180_001 | Banana | mitochondrion, nucleus, peroxisome, plastid | 34.93 | 40.39 |
| TraesCS5B01G325800.1 | Wheat | mitochondrion | 41.69 | 39.15 |
| TraesCS5A01G325400.2 | Wheat | nucleus | 40.56 | 38.92 |
| KRH53246 | Soybean | nucleus | 18.31 | 35.52 |
| KRH64669 | Soybean | nucleus | 19.72 | 34.65 |
| KRH16389 | Soybean | nucleus | 18.31 | 31.71 |
| KRH17980 | Soybean | nucleus | 18.03 | 31.53 |
| KRH05664 | Soybean | nucleus | 10.7 | 31.41 |
| KRH27487 | Soybean | cytosol, nucleus, plastid | 18.87 | 27.13 |
| KRH20832 | Soybean | nucleus | 18.59 | 26.72 |
| KRH29702 | Soybean | nucleus | 17.46 | 25.0 |
| KRH24699 | Soybean | nucleus | 17.46 | 25.0 |
| KRH48568 | Soybean | nucleus | 13.8 | 13.84 |
| KRH39137 | Soybean | nucleus | 14.37 | 13.82 |
| KRH41763 | Soybean | nucleus | 13.8 | 13.0 |
| KRH30071 | Soybean | cytosol | 12.39 | 12.79 |
| KRH55165 | Soybean | nucleus | 10.7 | 12.22 |
| KRH60461 | Soybean | nucleus | 13.8 | 11.37 |
| KRG95955 | Soybean | nucleus | 17.18 | 11.11 |
| KRH67668 | Soybean | nucleus | 16.62 | 10.71 |
| KRH55090 | Soybean | nucleus | 10.99 | 10.48 |
| KRH32434 | Soybean | nucleus | 15.77 | 10.39 |
| KRH19845 | Soybean | nucleus | 16.06 | 10.36 |
| KRH55161 | Soybean | nucleus | 13.24 | 10.26 |
| KRH26195 | Soybean | nucleus | 13.24 | 10.26 |
| KRH04957 | Soybean | nucleus | 14.93 | 9.96 |
| KRH16134 | Soybean | nucleus | 14.65 | 9.37 |
| KRH52597 | Soybean | nucleus | 14.08 | 9.24 |
| KRH04592 | Soybean | nucleus | 8.17 | 8.68 |
| KRH04591 | Soybean | nucleus | 8.17 | 8.61 |
| KRH61306 | Soybean | nucleus | 15.77 | 8.56 |
| KRH50319 | Soybean | nucleus | 17.18 | 8.53 |
| KRH22017 | Soybean | nucleus | 12.68 | 8.52 |
| KRH52013 | Soybean | nucleus | 16.9 | 8.47 |
| KRH70661 | Soybean | mitochondrion, nucleus | 17.18 | 8.37 |
| KRH61936 | Soybean | nucleus | 12.96 | 8.26 |
| KRH61311 | Soybean | nucleus | 16.9 | 8.17 |
| KRH05663 | Soybean | cytosol | 7.32 | 4.48 |
Protein Annotations
| EMBL:ACUP02006721 | EnsemblPlants:KRH36126 | EnsemblPlantsGene:GLYMA_10G284900 | EntrezGene:100306465 | Gene3D:3.30.40.10 | InterPro:IPR001841 |
| InterPro:IPR013083 | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | ncoils:Coil | PANTHER:PTHR14155 | PANTHER:PTHR14155:SF166 |
| PFAM:PF13639 | PFscan:PS50089 | ProteinID:KRH36126 | ProteinID:KRH36126.1 | SEG:seg | SUPFAM:SSF57850 |
| UniParc:UPI0006EDB2CF | UniProt:A0A0R0I0U2 | MapMan:35.1 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:50526687..50530288
Molecular Weight (calculated)
39229.3 Da
IEP (calculated)
3.722
GRAVY (calculated)
-0.888
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MENDTAAAAN NNTTATAAAK AGSGGVKSNN HNLEEEHSNL NGEEQMAEQV EAEEEEEEEE DRQADEGEGE ETGSAAPNPR QPSRTPFTNL SQVDADLALA
101: RTLQEQERAY MMLRMNNDGS DYGSWEGGSY LHDDGDDFDD LHDGTDVDED EDEDDDEDDE NEEYEDEDAF DAHAHASAGE HDNPSIEFDP DLFSSDEAYA
201: RALQEAEERE MAVRLLALAG INDREEEDIE EHGANSQDAW EDVDPDELSY EELLALSEVV GTESRGLSTD TIACLPSVNY KTGSDQHGSH DSCVICRVDY
301: EDGESLTVLS CKHLYHPECI NNWLKINKVV VVVYGSIRSL IHAPVCSWLD NAFVP
101: RTLQEQERAY MMLRMNNDGS DYGSWEGGSY LHDDGDDFDD LHDGTDVDED EDEDDDEDDE NEEYEDEDAF DAHAHASAGE HDNPSIEFDP DLFSSDEAYA
201: RALQEAEERE MAVRLLALAG INDREEEDIE EHGANSQDAW EDVDPDELSY EELLALSEVV GTESRGLSTD TIACLPSVNY KTGSDQHGSH DSCVICRVDY
301: EDGESLTVLS CKHLYHPECI NNWLKINKVV VVVYGSIRSL IHAPVCSWLD NAFVP
001: MPMENDNGPH VGNVVVTAEQ ATKINETDGR LPENRQTGVV SDTGSGSERG EQGVGESAVA VAVPVEESGS ISVGELPAPR SSSARVPFTN LSQIDADLAL
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
101: ARTLQEQERA YMMLTMNSEI SDYGSWETGS YVYDEDEFDD PENEDEDDDE DEYETDDDPQ EDGLDVNVHA NEDDQEDDGN SDIEEVAYTD DEAYARALQE
201: AEERDMAARL SALSGLANRV VEDLEDESHT SQDAWDEMDP DELSYEELLA LGDIVGTESR GLSADTIASL PSKRYKEGDN QNGTNESCVI CRLDYEDDED
301: LILLPCKHSY HSECINNWLK INKVCPVCSA EVSTSTSGQS
Arabidopsis Description
BBRE3 ubiquitin ligase BIG BROTHER-related [Source:UniProtKB/Swiss-Prot;Acc:Q9LT17]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.