CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH04591	Soybean	nucleus	96.41	95.55
KRH05664	Soybean	nucleus	11.38	31.41
VIT_11s0118g00640.t01	Wine grape	nucleus	9.58	26.89
KRH53246	Soybean	nucleus	10.48	19.13
KRH64669	Soybean	nucleus	10.48	17.33
KRH16389	Soybean	nucleus	9.28	15.12
KRH17980	Soybean	nucleus	8.98	14.78
KRH27487	Soybean	cytosol, nucleus, plastid	9.88	13.36
KRH20832	Soybean	nucleus	9.58	12.96
KRH55165	Soybean	nucleus	11.68	12.54
KRH29702	Soybean	nucleus	9.28	12.5
KRH24699	Soybean	nucleus	8.98	12.1
KRH30071	Soybean	cytosol	12.28	11.92
KRH48568	Soybean	nucleus	12.28	11.58
KRH55090	Soybean	nucleus	12.57	11.29
KRH39137	Soybean	nucleus	11.98	10.84
KRH41763	Soybean	nucleus	11.38	10.08
KRH55161	Soybean	nucleus	13.77	10.04
KRH26195	Soybean	nucleus	13.77	10.04
KRH52597	Soybean	nucleus	15.87	9.8
KRH04957	Soybean	nucleus	15.57	9.77
KRH22017	Soybean	nucleus	15.27	9.66
KRH19845	Soybean	nucleus	15.57	9.45
KRH32434	Soybean	nucleus	14.97	9.28
KRH16134	Soybean	nucleus	15.27	9.19
KRG90628	Soybean	nucleus	8.98	8.96
KRH60461	Soybean	nucleus	11.08	8.58
KRG95955	Soybean	nucleus	13.77	8.38
KRH36126	Soybean	cytosol, mitochondrion, nucleus	8.68	8.17
KRH67668	Soybean	nucleus	13.47	8.17
KRH61936	Soybean	nucleus	12.28	7.36
KRH61306	Soybean	nucleus	14.37	7.34
KRH61311	Soybean	nucleus	15.87	7.22
KRH52013	Soybean	nucleus	15.27	7.2
KRH70661	Soybean	mitochondrion, nucleus	15.57	7.13
KRH50319	Soybean	nucleus	15.27	7.13
KRH05663	Soybean	cytosol	7.19	4.13

Protein Annotations

EntrezGene:102666869	Gene3D:3.30.40.10	MapMan:35.2	EMBL:ACUP02010452	ncoils:Coil	EnsemblPlantsGene:GLYMA_17G172200
GO:GO:0003674	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016567	GO:GO:0016740	GO:GO:0019538	GO:GO:0043161	GO:GO:0061630
InterPro:IPR001841	InterPro:IPR013083	UniProt:K7MM45	EnsemblPlants:KRH04592	ProteinID:KRH04592	ProteinID:KRH04592.1
ProteinID:KRH04593.1	PFAM:PF13639	PFscan:PS50089	PANTHER:PTHR14155	PANTHER:PTHR14155:SF441	SMART:SM00184
SUPFAM:SSF57850	UniParc:UPI00023D5F41	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr17:+:17237893..17244770

Molecular Weight (calculated)

37321.3 Da

IEP (calculated)

4.498

GRAVY (calculated)

-0.637

Length

334 amino acids

Sequence
(BLAST)

001: MNRQGDSDGQ TNTNNRSNNE NQTMPLSPFE TLELLPLFPL TPENAGQVED MPGADDMAPL LGQESTMFRQ VGTSVGTPSF NLPQRLNHLE PRQLVSGYED
101: DNGNEAVVYH LLNDQAGLST LRASQSQRLN YSGGASSSRT HNYHNQVQVL ESGVPPYVQH GPSLSPLPSY PSAEERRRLS SYVQSTLEAL RSGPSAVMFD
201: IDFDTMEFRS IDHALVSPYG FQNPEEFDAL PQGLTVETIV QHLESETYVI VNKDAPEEDK EKCPICLEEF EEGNLIGKLH SCIHKYHRHC IRQWLLCRNF
301: CPVCKRVGLE TNNNVKSEAT AAEININEND NDNV

Best Arabidopsis Sequence Match ( AT4G34040.1 )
(BLAST)

001: MQGPRSTGDS STGINYADGE PICSTNSETT SNNILNPVDV QFPNNTTGSG RPTYASSSSH VVQNHNWWSF GESSSRLGPS DHLNSNGSKT DRQLLSDGYG
101: FEEGQSGMLL PGESFLRGSS SSHMLSHVNL GKDMDIGSGL QTSGVVIRHN NCETSLGSSS QTAEERSSGP GSSLGGLGSS CKRKALEGAP SHSFPGESHG
201: CFFQTENGAW NEGLAQYDAS SSLSLSMPSQ NSPNVNNQSG LPEPRFGLGG GRAVTASAFP STRSTETISR PGRRLNPGQP PESVAFSFTQ SGSSVRQQQQ
301: LPATSPFVDP LDARAIPVTG SSSSGDGQPS MIHLPALTRN IHQFAWSASS SSRANSMPEE GLSPWDAPRI NSEQPVFTTP ANETRNPVQD QFCWSFTRGN
401: PSTSGDSPFV PRAGSSSGIH GLQPNPTWVT PHNQSRISEV APWSLFPSIE SESATHGASL PLLPTGPSVS SNEAAAPSGS SSRSHRSRQR RSGLLLERQN
501: DHLHLRHLGR SLAADNDGRN RLISEIRQVL SAMRRGENLR FEDYMVFDPL IYQGMAEMHD RHRDMRLDVD NMSYEELLAL GERIGDVSTG LSEEVILKVM
601: KQHKHTSSAA GSHQDMEPCC VCQEEYAEGD DLGTLGCGHE FHTACVKQWL MLKNLCPICK TVALST

Arabidopsis Description

MBR2E3 ubiquitin-protein ligase MBR2 [Source:UniProtKB/Swiss-Prot;Acc:O49500]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.